RNA–Protein interactions for RNA: ENST00000426612.5

FGFR4-204, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 1 (best)

Gene FGFR4, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-204ENST00000426612 SEPT12Q8IYM1 358 aa28.56■■■□□ 2.16
FGFR4-204ENST00000426612 POLR3GLQ9BT43 218 aa28.56■■■□□ 2.16
FGFR4-204ENST00000426612 CRB1P82279 1406 aa28.54■■■□□ 2.16
FGFR4-204ENST00000426612 FAM98CQ17RN3 349 aaKnown RBP28.54■■■□□ 2.16
FGFR4-204ENST00000426612 WNK3Q9BYP7 1800 aa28.54■■■□□ 2.16
FGFR4-204ENST00000426612 ANKRD26Q9UPS8 1709 aa28.54■■■□□ 2.16
FGFR4-204ENST00000426612 NSD3Q9BZ95 1437 aa28.53■■■□□ 2.16
FGFR4-204ENST00000426612 LARP1Q6PKG0 1096 aaKnown RBP28.53■■■□□ 2.16
FGFR4-204ENST00000426612 FYB1O15117 783 aa28.52■■■□□ 2.16
FGFR4-204ENST00000426612 FAM208AQ9UK61 1670 aaKnown RBP28.51■■■□□ 2.16
FGFR4-204ENST00000426612 A0A0G2JS52 829 aa28.51■■■□□ 2.15
FGFR4-204ENST00000426612 MYT1Q01538 1121 aa28.51■■■□□ 2.15
FGFR4-204ENST00000426612 THRAP3Q9Y2W1 955 aaKnown RBP28.51■■■□□ 2.15
FGFR4-204ENST00000426612 PARP4Q9UKK3 1724 aaKnown RBP28.5■■■□□ 2.15
FGFR4-204ENST00000426612 BARGINQ6ZT62 677 aa28.5■■■□□ 2.15
FGFR4-204ENST00000426612 UPF1Q92900 1129 aaKnown RBP eCLIP28.5■■■□□ 2.158e-11■■■□□ 18.7
FGFR4-204ENST00000426612 CARD14Q9BXL6 1004 aa28.5■■■□□ 2.15
FGFR4-204ENST00000426612 AXIN2Q9Y2T1 843 aa28.5■■■□□ 2.15
FGFR4-204ENST00000426612 WDR17Q8IZU2 1322 aa28.49■■■□□ 2.15
FGFR4-204ENST00000426612 TCP11L2Q8N4U5 519 aa28.49■■■□□ 2.15
FGFR4-204ENST00000426612 CGNL1Q0VF96 1302 aa28.47■■■□□ 2.15
FGFR4-204ENST00000426612 BLMP54132 1417 aaPredicted RBP28.47■■■□□ 2.15
FGFR4-204ENST00000426612 KRT27Q7Z3Y8 459 aa28.47■■■□□ 2.15
FGFR4-204ENST00000426612 GGNBP2Q9H3C7 697 aa28.47■■■□□ 2.15
FGFR4-204ENST00000426612 USP35Q9P2H5 1018 aa28.47■■■□□ 2.15
FGFR4-204ENST00000426612 TOM1L2Q6ZVM7 507 aa28.46■■■□□ 2.15
FGFR4-204ENST00000426612 C11orf95C9JLR9 678 aaPredicted RBP28.45■■■□□ 2.14
FGFR4-204ENST00000426612 MAP2P11137 1827 aaKnown RBP28.44■■■□□ 2.14
FGFR4-204ENST00000426612 CSB-PGBD3P0DP91 1061 aa28.43■■■□□ 2.14
FGFR4-204ENST00000426612 KIF7Q2M1P5 1343 aa28.42■■■□□ 2.14
FGFR4-204ENST00000426612 RTL1A6NKG5 1358 aa28.41■■■□□ 2.14
FGFR4-204ENST00000426612 CCDC125Q86Z20 511 aa28.41■■■□□ 2.14
FGFR4-204ENST00000426612 IP6K1Q92551 441 aa28.41■■■□□ 2.14
FGFR4-204ENST00000426612 PANK3Q9H999 370 aa28.41■■■□□ 2.14
FGFR4-204ENST00000426612 ERBB3P21860 1342 aa28.41■■■□□ 2.14
FGFR4-204ENST00000426612 CARD10Q9BWT7 1032 aa28.4■■■□□ 2.14
FGFR4-204ENST00000426612 CCDC7Q96M83 1385 aa28.39■■■□□ 2.14
FGFR4-204ENST00000426612 MAP3K19Q56UN5 1328 aa28.39■■■□□ 2.13
FGFR4-204ENST00000426612 KIF24Q5T7B8 1368 aa28.38■■■□□ 2.13
FGFR4-204ENST00000426612 CDCA7Q9BWT1 371 aaPredicted RBP28.38■■■□□ 2.13
FGFR4-204ENST00000426612 LRRC37A3O60309 1634 aa28.38■■■□□ 2.13
FGFR4-204ENST00000426612 NSD2O96028 1365 aa28.37■■■□□ 2.13
FGFR4-204ENST00000426612 AMPHP49418 695 aa28.37■■■□□ 2.13
FGFR4-204ENST00000426612 RGPD1P0DJD0 1748 aa28.37■■■□□ 2.13
FGFR4-204ENST00000426612 RGPD2P0DJD1 1756 aa28.35■■■□□ 2.13
FGFR4-204ENST00000426612 HOXC9P31274 260 aa28.35■■■□□ 2.13
FGFR4-204ENST00000426612 ANKRD24Q8TF21 1146 aa28.35■■■□□ 2.13
FGFR4-204ENST00000426612 PEAK1Q9H792 1746 aa28.34■■■□□ 2.13
FGFR4-204ENST00000426612 PDE3BQ13370 1112 aa28.33■■■□□ 2.13
FGFR4-204ENST00000426612 RRS1Q15050 365 aaKnown RBP28.32■■■□□ 2.12
FGFR4-204ENST00000426612 NLRP2Q9NX02 1062 aa28.31■■■□□ 2.12
FGFR4-204ENST00000426612 KNSTRNQ9Y448 316 aa28.31■■■□□ 2.12
FGFR4-204ENST00000426612 FLT4P35916 1363 aa28.31■■■□□ 2.12
FGFR4-204ENST00000426612 SMG6Q86US8 1419 aaKnown RBP28.3■■■□□ 2.12
FGFR4-204ENST00000426612 FBLN1P23142 703 aa28.3■■■□□ 2.12
FGFR4-204ENST00000426612 DISP2A7MBM2 1401 aa28.29■■■□□ 2.12
FGFR4-204ENST00000426612 DDB1Q16531 1140 aa28.28■■■□□ 2.12
FGFR4-204ENST00000426612 FAM196AQ6ZSG2 479 aa28.28■■■□□ 2.12
FGFR4-204ENST00000426612 SBF2Q86WG5 1849 aa28.27■■■□□ 2.12
FGFR4-204ENST00000426612 TNS1Q9HBL0 1735 aaKnown RBP28.27■■■□□ 2.12
FGFR4-204ENST00000426612 WASHC2AQ641Q2 1341 aa28.27■■■□□ 2.12
FGFR4-204ENST00000426612 SF3B2Q13435 895 aaKnown RBP28.27■■■□□ 2.12
FGFR4-204ENST00000426612 INSRP06213 1382 aa28.26■■■□□ 2.12
FGFR4-204ENST00000426612 LTV1Q96GA3 475 aaPredicted RBP28.25■■■□□ 2.11
FGFR4-204ENST00000426612 OVOS2A0A0G2JMS6 1433 aa28.23■■■□□ 2.11
FGFR4-204ENST00000426612 IL2RBP14784 551 aa28.22■■■□□ 2.11
FGFR4-204ENST00000426612 FAM182BQ5T319 152 aa28.22■■■□□ 2.11
FGFR4-204ENST00000426612 TNS2Q63HR2 1409 aa28.22■■■□□ 2.11
FGFR4-204ENST00000426612 EMILIN1Q9Y6C2 1016 aa28.21■■■□□ 2.11
FGFR4-204ENST00000426612 EXOC5O00471 708 aa28.2■■■□□ 2.1
FGFR4-204ENST00000426612 HSP90AB2PQ58FF8 381 aa28.19■■■□□ 2.1
FGFR4-204ENST00000426612 AMER1Q5JTC6 1135 aaPredicted RBP28.18■■■□□ 2.1
FGFR4-204ENST00000426612 MORC1Q86VD1 984 aa28.18■■■□□ 2.1
FGFR4-204ENST00000426612 PPM1GO15355 546 aaPredicted RBP28.17■■■□□ 2.1
FGFR4-204ENST00000426612 PER1O15534 1290 aaPredicted RBP28.17■■■□□ 2.1
FGFR4-204ENST00000426612 POLKQ9UBT6 870 aa28.17■■■□□ 2.1
FGFR4-204ENST00000426612 KAT6BQ8WYB5 2073 aa28.17■■■□□ 2.1
FGFR4-204ENST00000426612 BCL9O00512 1426 aa28.17■■■□□ 2.1
FGFR4-204ENST00000426612 TNNT2P45379 298 aaPredicted RBP28.16■■■□□ 2.1
FGFR4-204ENST00000426612 BAG6P46379 1132 aa28.15■■■□□ 2.1
FGFR4-204ENST00000426612 NPC1L1Q9UHC9 1359 aa28.14■■■□□ 2.1
FGFR4-204ENST00000426612 SHANK3Q9BYB0 1731 aa28.13■■■□□ 2.09
FGFR4-204ENST00000426612 TRIM37O94972 964 aa28.12■■■□□ 2.09
FGFR4-204ENST00000426612 ZEB1P37275 1124 aaPredicted RBP28.12■■■□□ 2.09
FGFR4-204ENST00000426612 NBPF6Q5VWK0 638 aa28.12■■■□□ 2.09
FGFR4-204ENST00000426612 NBPF4Q96M43 638 aa28.12■■■□□ 2.09
FGFR4-204ENST00000426612 RGPD3A6NKT7 1758 aaPredicted RBP28.11■■■□□ 2.09
FGFR4-204ENST00000426612 RGPD4Q7Z3J3 1758 aa28.11■■■□□ 2.09
FGFR4-204ENST00000426612 MARCH10Q8NA82 808 aaPredicted RBP28.11■■■□□ 2.09
FGFR4-204ENST00000426612 NHSQ6T4R5 1651 aa28.08■■■□□ 2.09
FGFR4-204ENST00000426612 DEFB132Q7Z7B7 95 aa28.08■■■□□ 2.09
FGFR4-204ENST00000426612 NCAPD2Q15021 1401 aa28.08■■■□□ 2.09
FGFR4-204ENST00000426612 MEGF6O75095 1541 aa28.08■■■□□ 2.08
FGFR4-204ENST00000426612 RAPGEF4Q8WZA2 1011 aa28.07■■■□□ 2.08
FGFR4-204ENST00000426612 PKD1L3Q7Z443 1732 aa28.06■■■□□ 2.08
FGFR4-204ENST00000426612 PARD3Q8TEW0 1356 aa28.05■■■□□ 2.08
FGFR4-204ENST00000426612 RREB1Q92766 1687 aa28.04■■■□□ 2.08
FGFR4-204ENST00000426612 CC2D1BQ5T0F9 858 aaKnown RBP28.04■■■□□ 2.08
FGFR4-204ENST00000426612 USHBP1Q8N6Y0 703 aa28.04■■■□□ 2.08
FGFR4-204ENST00000426612 APBA3O96018 575 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms