RNA–Protein interactions for RNA: ENST00000424643.3

SDCBPP2-201, Transcript of syndecan binding protein pseudogene 2, humanhuman

BASIC

Gene SDCBPP2, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP2-201ENST00000424643 NR3C2P08235 984 aa7.6□□□□□ -1.19
SDCBPP2-201ENST00000424643 ERFEQ4G0M1 354 aa7.6□□□□□ -1.19
SDCBPP2-201ENST00000424643 TMEM259Q4ZIN3 620 aa7.6□□□□□ -1.19
SDCBPP2-201ENST00000424643 VASH1Q7L8A9 365 aaPredicted RBP7.6□□□□□ -1.19
SDCBPP2-201ENST00000424643 TRIM46Q7Z4K8 759 aa7.6□□□□□ -1.19
SDCBPP2-201ENST00000424643 PROSER2Q86WR7 435 aaPredicted RBP7.6□□□□□ -1.19
SDCBPP2-201ENST00000424643 POM121Q96HA1 1249 aa7.6□□□□□ -1.19
SDCBPP2-201ENST00000424643 TIMP2P16035 220 aa7.59□□□□□ -1.19
SDCBPP2-201ENST00000424643 KLF16Q9BXK1 252 aaPredicted RBP7.59□□□□□ -1.19
SDCBPP2-201ENST00000424643 ZFAND3Q9H8U3 227 aa7.59□□□□□ -1.19
SDCBPP2-201ENST00000424643 FSHRP23945 695 aa7.58□□□□□ -1.2
SDCBPP2-201ENST00000424643 NR5A1Q13285 461 aa7.58□□□□□ -1.2
SDCBPP2-201ENST00000424643 LCE2CQ5TA81 110 aa7.58□□□□□ -1.2
SDCBPP2-201ENST00000424643 ZBTB33Q86T24 672 aa7.58□□□□□ -1.2
SDCBPP2-201ENST00000424643 CCDC82Q8N4S0 544 aa7.58□□□□□ -1.2
SDCBPP2-201ENST00000424643 ITPKCQ96DU7 683 aa7.58□□□□□ -1.2
SDCBPP2-201ENST00000424643 OCSTAMPQ9BR26 566 aa7.58□□□□□ -1.2
SDCBPP2-201ENST00000424643 TRIM34Q9BYJ4 488 aa7.58□□□□□ -1.2
SDCBPP2-201ENST00000424643 SENP2Q9HC62 589 aa7.58□□□□□ -1.2
SDCBPP2-201ENST00000424643 ZIC2O95409 532 aaPredicted RBP7.57□□□□□ -1.2
SDCBPP2-201ENST00000424643 PTK2Q05397 1052 aa7.57□□□□□ -1.2
SDCBPP2-201ENST00000424643 TRMT44Q8IYL2 757 aaKnown RBP7.57□□□□□ -1.2
SDCBPP2-201ENST00000424643 BANK1Q8NDB2 785 aa7.57□□□□□ -1.2
SDCBPP2-201ENST00000424643 TRIM47Q96LD4 638 aa7.57□□□□□ -1.2
SDCBPP2-201ENST00000424643 SNRKQ9NRH2 765 aa7.57□□□□□ -1.2
SDCBPP2-201ENST00000424643 ZNF777Q9ULD5 760 aaPredicted RBP7.57□□□□□ -1.2
SDCBPP2-201ENST00000424643 ZC3H4Q9UPT8 1303 aaKnown RBP7.56□□□□□ -1.2
SDCBPP2-201ENST00000424643 TERTO14746 1132 aaKnown RBP7.56□□□□□ -1.2
SDCBPP2-201ENST00000424643 ADAM32Q8TC27 787 aa7.56□□□□□ -1.2
SDCBPP2-201ENST00000424643 COG6Q9Y2V7 657 aa7.56□□□□□ -1.2
SDCBPP2-201ENST00000424643 MAP4K5Q9Y4K4 846 aa7.56□□□□□ -1.2
SDCBPP2-201ENST00000424643 FNBP4Q8N3X1 1017 aaPredicted RBP7.55□□□□□ -1.2
SDCBPP2-201ENST00000424643 SLC10A4Q96EP9 437 aa7.55□□□□□ -1.2
SDCBPP2-201ENST00000424643 ZFP42Q96MM3 310 aa7.55□□□□□ -1.2
SDCBPP2-201ENST00000424643 MRPL14Q6P1L8 145 aaKnown RBP7.54□□□□□ -1.2
SDCBPP2-201ENST00000424643 PNMA1Q8ND90 353 aa7.54□□□□□ -1.2
SDCBPP2-201ENST00000424643 KIFC2Q96AC6 838 aa7.54□□□□□ -1.2
SDCBPP2-201ENST00000424643 GJD4Q96KN9 370 aaPredicted RBP7.54□□□□□ -1.2
SDCBPP2-201ENST00000424643 KCTD15Q96SI1 283 aaPredicted RBP7.54□□□□□ -1.2
SDCBPP2-201ENST00000424643 CCDC116Q8IYX3 515 aa7.53□□□□□ -1.2
SDCBPP2-201ENST00000424643 PURBQ96QR8 312 aaKnown RBP7.53□□□□□ -1.2
SDCBPP2-201ENST00000424643 GPSM3Q9Y4H4 160 aa7.53□□□□□ -1.2
SDCBPP2-201ENST00000424643 C6orf118Q5T5N4 469 aa7.52□□□□□ -1.21
SDCBPP2-201ENST00000424643 RAB15P59190 212 aa7.51□□□□□ -1.21
SDCBPP2-201ENST00000424643 SCARF1Q14162 830 aa7.51□□□□□ -1.21
SDCBPP2-201ENST00000424643 PPP1R26Q5T8A7 1209 aaPredicted RBP7.51□□□□□ -1.21
SDCBPP2-201ENST00000424643 MTMR14Q8NCE2 650 aa7.51□□□□□ -1.21
SDCBPP2-201ENST00000424643 EMILIN1Q9Y6C2 1016 aa7.51□□□□□ -1.21
SDCBPP2-201ENST00000424643 DZIP3Q86Y13 1208 aaKnown RBP7.5□□□□□ -1.21
SDCBPP2-201ENST00000424643 CCDC97Q96F63 343 aaPredicted RBP7.5□□□□□ -1.21
SDCBPP2-201ENST00000424643 ZNF330Q9Y3S2 320 aaPredicted RBP7.5□□□□□ -1.21
SDCBPP2-201ENST00000424643 SOBPA7XYQ1 873 aa7.49□□□□□ -1.21
SDCBPP2-201ENST00000424643 BMP2P12643 396 aa7.49□□□□□ -1.21
SDCBPP2-201ENST00000424643 CBLBQ13191 982 aa7.49□□□□□ -1.21
SDCBPP2-201ENST00000424643 INTS6LQ5JSJ4 861 aaKnown RBP7.49□□□□□ -1.21
SDCBPP2-201ENST00000424643 GDPD2Q9HCC8 539 aa7.49□□□□□ -1.21
SDCBPP2-201ENST00000424643 PODXL2Q9NZ53 605 aa7.49□□□□□ -1.21
SDCBPP2-201ENST00000424643 CDV3Q9UKY7 258 aaKnown RBP7.49□□□□□ -1.21
SDCBPP2-201ENST00000424643 ZBBXA8MT70 800 aa7.48□□□□□ -1.21
SDCBPP2-201ENST00000424643 FBXO45P0C2W1 286 aa7.48□□□□□ -1.21
SDCBPP2-201ENST00000424643 MEIOBQ8N635 442 aa7.48□□□□□ -1.21
SDCBPP2-201ENST00000424643 SERPINA10Q9UK55 444 aa7.48□□□□□ -1.21
SDCBPP2-201ENST00000424643 UPP2O95045 317 aa7.47□□□□□ -1.21
SDCBPP2-201ENST00000424643 TRIM26Q12899 539 aaPredicted RBP7.47□□□□□ -1.21
SDCBPP2-201ENST00000424643 NBPF20Q3BBV1 942 aa7.47□□□□□ -1.21
SDCBPP2-201ENST00000424643 LINC00528Q8N1L1 170 aa7.47□□□□□ -1.21
SDCBPP2-201ENST00000424643 TMPRSS4Q9NRS4 437 aa7.47□□□□□ -1.21
SDCBPP2-201ENST00000424643 PGPEP1Q9NXJ5 209 aa7.47□□□□□ -1.21
SDCBPP2-201ENST00000424643 GPR37L1O60883 481 aa7.46□□□□□ -1.22
SDCBPP2-201ENST00000424643 ABL2P42684 1182 aa7.46□□□□□ -1.22
SDCBPP2-201ENST00000424643 VEGFBP49765 207 aa7.46□□□□□ -1.22
SDCBPP2-201ENST00000424643 DHX9Q08211 1270 aaKnown RBP7.46□□□□□ -1.22
SDCBPP2-201ENST00000424643 WWC1Q8IX03 1113 aa7.46□□□□□ -1.22
SDCBPP2-201ENST00000424643 PRM3Q9NNZ6 103 aa7.46□□□□□ -1.22
SDCBPP2-201ENST00000424643 PCDHB9Q9Y5E1 797 aa7.46□□□□□ -1.22
SDCBPP2-201ENST00000424643 FAM181BA6NEQ2 426 aa7.45□□□□□ -1.22
SDCBPP2-201ENST00000424643 SOCS7O14512 581 aa7.45□□□□□ -1.22
SDCBPP2-201ENST00000424643 SLC16A10Q8TF71 515 aa7.45□□□□□ -1.22
SDCBPP2-201ENST00000424643 AGBL1Q96MI9 1066 aa7.45□□□□□ -1.22
SDCBPP2-201ENST00000424643 TSEN34Q9BSV6 310 aaKnown RBP7.45□□□□□ -1.22
SDCBPP2-201ENST00000424643 TBC1D2BQ9UPU7 963 aa7.45□□□□□ -1.22
SDCBPP2-201ENST00000424643 NDUFB9Q9Y6M9 179 aa7.45□□□□□ -1.22
SDCBPP2-201ENST00000424643 ERVH48-1M5A8F1 160 aa7.44□□□□□ -1.22
SDCBPP2-201ENST00000424643 GIGYF1O75420 1035 aaPredicted RBP7.44□□□□□ -1.22
SDCBPP2-201ENST00000424643 PDIA4P13667 645 aaKnown RBP7.44□□□□□ -1.22
SDCBPP2-201ENST00000424643 Q6ZVU0 165 aa7.44□□□□□ -1.22
SDCBPP2-201ENST00000424643 ZNF784Q8NCA9 323 aaPredicted RBP7.44□□□□□ -1.22
SDCBPP2-201ENST00000424643 NXF1Q9UBU9 619 aaKnown RBP7.44□□□□□ -1.22
SDCBPP2-201ENST00000424643 MAN1A2O60476 641 aa7.43□□□□□ -1.22
SDCBPP2-201ENST00000424643 NR1H3Q13133 447 aa7.43□□□□□ -1.22
SDCBPP2-201ENST00000424643 ESPNB1AK53 854 aa7.42□□□□□ -1.22
SDCBPP2-201ENST00000424643 LORP23490 312 aaPredicted RBP7.42□□□□□ -1.22
SDCBPP2-201ENST00000424643 ADD1P35611 737 aaKnown RBP7.42□□□□□ -1.22
SDCBPP2-201ENST00000424643 RELBQ01201 579 aa7.42□□□□□ -1.22
SDCBPP2-201ENST00000424643 CCDC180Q9P1Z9 1646 aa7.41□□□□□ -1.22
SDCBPP2-201ENST00000424643 LOC100996750A0A140TA64 210 aa7.41□□□□□ -1.22
SDCBPP2-201ENST00000424643 FIGNL2A6NMB9 653 aa7.41□□□□□ -1.22
SDCBPP2-201ENST00000424643 POM121CA8CG34 1229 aa7.41□□□□□ -1.22
SDCBPP2-201ENST00000424643 GMPRP36959 345 aa7.41□□□□□ -1.22
SDCBPP2-201ENST00000424643 CALR3Q96L12 384 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms