RNA–Protein interactions for RNA: ENST00000424235.1

SNHG17-205, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 764 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-205ENST00000424235 A0A1W2PP64 1363 aa22.54■■□□□ 1.2
SNHG17-205ENST00000424235 TESK2Q96S53 571 aa22.54■■□□□ 1.2
SNHG17-205ENST00000424235 BARGINQ6ZT62 677 aa22.53■■□□□ 1.2
SNHG17-205ENST00000424235 TIMELESSQ9UNS1 1208 aa22.53■■□□□ 1.2
SNHG17-205ENST00000424235 CRB1P82279 1406 aa22.53■■□□□ 1.2
SNHG17-205ENST00000424235 EDC4Q6P2E9 1401 aaKnown RBP22.53■■□□□ 1.2
SNHG17-205ENST00000424235 NINLQ9Y2I6 1382 aa22.52■■□□□ 1.2
SNHG17-205ENST00000424235 PUS7Q96PZ0 661 aaKnown RBP22.52■■□□□ 1.2
SNHG17-205ENST00000424235 THRAP3Q9Y2W1 955 aaKnown RBP22.52■■□□□ 1.2
SNHG17-205ENST00000424235 R3HDM1Q15032 1099 aaKnown RBP22.51■■□□□ 1.19
SNHG17-205ENST00000424235 ARHGEF25Q86VW2 580 aa22.51■■□□□ 1.19
SNHG17-205ENST00000424235 CD163L1Q9NR16 1453 aa22.51■■□□□ 1.19
SNHG17-205ENST00000424235 CDCA8Q53HL2 280 aa22.5■■□□□ 1.19
SNHG17-205ENST00000424235 FAM196AQ6ZSG2 479 aa22.5■■□□□ 1.19
SNHG17-205ENST00000424235 POLR3GLQ9BT43 218 aa22.49■■□□□ 1.19
SNHG17-205ENST00000424235 DISP2A7MBM2 1401 aa22.48■■□□□ 1.19
SNHG17-205ENST00000424235 TRIM37O94972 964 aa22.48■■□□□ 1.19
SNHG17-205ENST00000424235 AXIN2Q9Y2T1 843 aa22.48■■□□□ 1.19
SNHG17-205ENST00000424235 WDR17Q8IZU2 1322 aa22.48■■□□□ 1.19
SNHG17-205ENST00000424235 EZH2Q15910 746 aaKnown RBP22.46■■□□□ 1.19
SNHG17-205ENST00000424235 COG3Q96JB2 828 aa22.46■■□□□ 1.19
SNHG17-205ENST00000424235 USP31Q70CQ4 1352 aa22.46■■□□□ 1.19
SNHG17-205ENST00000424235 NFAT5O94916 1531 aa22.46■■□□□ 1.19
SNHG17-205ENST00000424235 DDB1Q16531 1140 aa22.45■■□□□ 1.18
SNHG17-205ENST00000424235 ANKRD36BQ8N2N9 1353 aa22.43■■□□□ 1.18
SNHG17-205ENST00000424235 NLRP2Q9NX02 1062 aa22.43■■□□□ 1.18
SNHG17-205ENST00000424235 APBA3O96018 575 aa22.42■■□□□ 1.18
SNHG17-205ENST00000424235 COL18A1P39060 1754 aa22.4■■□□□ 1.18
SNHG17-205ENST00000424235 RREB1Q92766 1687 aa22.4■■□□□ 1.18
SNHG17-205ENST00000424235 LTV1Q96GA3 475 aaPredicted RBP22.4■■□□□ 1.18
SNHG17-205ENST00000424235 CAMKK2Q96RR4 588 aa22.4■■□□□ 1.18
SNHG17-205ENST00000424235 CDCA7Q9BWT1 371 aaPredicted RBP22.4■■□□□ 1.18
SNHG17-205ENST00000424235 CARD10Q9BWT7 1032 aa22.4■■□□□ 1.18
SNHG17-205ENST00000424235 RGPD5Q99666 1765 aa22.39■■□□□ 1.17
SNHG17-205ENST00000424235 OVOS2A0A0J9YW53 1432 aa22.39■■□□□ 1.17
SNHG17-205ENST00000424235 OVOS2Q6IE36 1432 aa22.39■■□□□ 1.17
SNHG17-205ENST00000424235 NUP188Q5SRE5 1749 aa22.38■■□□□ 1.17
SNHG17-205ENST00000424235 AMPHP49418 695 aa22.38■■□□□ 1.17
SNHG17-205ENST00000424235 ANKRD24Q8TF21 1146 aa22.38■■□□□ 1.17
SNHG17-205ENST00000424235 OVOS2A0A0G2JMS6 1433 aa22.38■■□□□ 1.17
SNHG17-205ENST00000424235 LTN1O94822 1766 aa22.38■■□□□ 1.17
SNHG17-205ENST00000424235 CCDC7Q96M83 1385 aa22.38■■□□□ 1.17
SNHG17-205ENST00000424235 PARP4Q9UKK3 1724 aaKnown RBP22.37■■□□□ 1.17
SNHG17-205ENST00000424235 ABCC6O95255 1503 aa22.37■■□□□ 1.17
SNHG17-205ENST00000424235 ERBB3P21860 1342 aa22.36■■□□□ 1.17
SNHG17-205ENST00000424235 C11orf95C9JLR9 678 aaPredicted RBP22.36■■□□□ 1.17
SNHG17-205ENST00000424235 GGNBP2Q9H3C7 697 aa22.36■■□□□ 1.17
SNHG17-205ENST00000424235 USP54Q70EL1 1684 aa22.36■■□□□ 1.17
SNHG17-205ENST00000424235 LRRC37A3O60309 1634 aa22.35■■□□□ 1.17
SNHG17-205ENST00000424235 EXOC5O00471 708 aa22.35■■□□□ 1.17
SNHG17-205ENST00000424235 EIF4G2P78344 907 aaKnown RBP eCLIP22.35■■□□□ 1.17
SNHG17-205ENST00000424235 PARD3Q8TEW0 1356 aa22.31■■□□□ 1.16
SNHG17-205ENST00000424235 IP6K1Q92551 441 aa22.31■■□□□ 1.16
SNHG17-205ENST00000424235 WNK3Q9BYP7 1800 aa22.31■■□□□ 1.16
SNHG17-205ENST00000424235 MAP3K19Q56UN5 1328 aa22.31■■□□□ 1.16
SNHG17-205ENST00000424235 IL2RBP14784 551 aa22.3■■□□□ 1.16
SNHG17-205ENST00000424235 FBLN1P23142 703 aa22.3■■□□□ 1.16
SNHG17-205ENST00000424235 RRS1Q15050 365 aaKnown RBP22.3■■□□□ 1.16
SNHG17-205ENST00000424235 NSD3Q9BZ95 1437 aa22.3■■□□□ 1.16
SNHG17-205ENST00000424235 FYB1O15117 783 aa22.29■■□□□ 1.16
SNHG17-205ENST00000424235 HSPA5P11021 654 aaKnown RBP22.29■■□□□ 1.16
SNHG17-205ENST00000424235 MARCH10Q8NA82 808 aaPredicted RBP22.28■■□□□ 1.16
SNHG17-205ENST00000424235 HOXC9P31274 260 aa22.27■■□□□ 1.16
SNHG17-205ENST00000424235 TNS2Q63HR2 1409 aa22.27■■□□□ 1.16
SNHG17-205ENST00000424235 SMG6Q86US8 1419 aaKnown RBP22.26■■□□□ 1.15
SNHG17-205ENST00000424235 NBPF14Q5TI25 921 aa22.26■■□□□ 1.15
SNHG17-205ENST00000424235 KIF20BQ96Q89 1820 aa22.25■■□□□ 1.15
SNHG17-205ENST00000424235 PPM1GO15355 546 aaPredicted RBP22.25■■□□□ 1.15
SNHG17-205ENST00000424235 MYOM1P52179 1685 aa22.23■■□□□ 1.15
SNHG17-205ENST00000424235 YY1P25490 414 aa22.23■■□□□ 1.15
SNHG17-205ENST00000424235 ACSBG1Q96GR2 724 aa22.23■■□□□ 1.15
SNHG17-205ENST00000424235 BCL11BQ9C0K0 894 aaPredicted RBP22.23■■□□□ 1.15
SNHG17-205ENST00000424235 CGNL1Q0VF96 1302 aa22.23■■□□□ 1.15
SNHG17-205ENST00000424235 RTL1A6NKG5 1358 aa22.23■■□□□ 1.15
SNHG17-205ENST00000424235 DDX54Q8TDD1 881 aaKnown RBP22.22■■□□□ 1.15
SNHG17-205ENST00000424235 CARD14Q9BXL6 1004 aa22.22■■□□□ 1.15
SNHG17-205ENST00000424235 PEAK1Q9H792 1746 aa22.21■■□□□ 1.15
SNHG17-205ENST00000424235 FAM208AQ9UK61 1670 aaKnown RBP22.2■■□□□ 1.14
SNHG17-205ENST00000424235 SBF2Q86WG5 1849 aa22.18■■□□□ 1.14
SNHG17-205ENST00000424235 TNNT2P45379 298 aaPredicted RBP22.18■■□□□ 1.14
SNHG17-205ENST00000424235 PTF1AQ7RTS3 328 aa22.18■■□□□ 1.14
SNHG17-205ENST00000424235 USHBP1Q8N6Y0 703 aa22.18■■□□□ 1.14
SNHG17-205ENST00000424235 FLT4P35916 1363 aa22.17■■□□□ 1.14
SNHG17-205ENST00000424235 PPP1R1BQ9UD71 204 aaPredicted RBP22.17■■□□□ 1.14
SNHG17-205ENST00000424235 RAPGEF4Q8WZA2 1011 aa22.16■■□□□ 1.14
SNHG17-205ENST00000424235 SPON1Q9HCB6 807 aa22.16■■□□□ 1.14
SNHG17-205ENST00000424235 RGPD3A6NKT7 1758 aaPredicted RBP22.16■■□□□ 1.14
SNHG17-205ENST00000424235 RGPD4Q7Z3J3 1758 aa22.16■■□□□ 1.14
SNHG17-205ENST00000424235 KCNQ2O43526 872 aa22.15■■□□□ 1.14
SNHG17-205ENST00000424235 HSP90AB2PQ58FF8 381 aa22.15■■□□□ 1.14
SNHG17-205ENST00000424235 SYTL4Q96C24 671 aaPredicted RBP22.15■■□□□ 1.14
SNHG17-205ENST00000424235 EMILIN1Q9Y6C2 1016 aa22.15■■□□□ 1.14
SNHG17-205ENST00000424235 PANK3Q9H999 370 aa22.14■■□□□ 1.13
SNHG17-205ENST00000424235 CASZ1Q86V15 1759 aa22.14■■□□□ 1.13
SNHG17-205ENST00000424235 BCL9O00512 1426 aa22.14■■□□□ 1.13
SNHG17-205ENST00000424235 PLSCR1O15162 318 aa22.13■■□□□ 1.13
SNHG17-205ENST00000424235 TATP17735 454 aaPredicted RBP22.12■■□□□ 1.13
SNHG17-205ENST00000424235 NBPF6Q5VWK0 638 aa22.12■■□□□ 1.13
SNHG17-205ENST00000424235 ZCRB1Q8TBF4 217 aaKnown RBP22.12■■□□□ 1.13
SNHG17-205ENST00000424235 NBPF4Q96M43 638 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms