RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 LARP1Q6PKG0 1096 aaKnown RBP36.72■■■■□ 3.47
CDK9-202ENST00000421939 THSD7AQ9UPZ6 1657 aa36.72■■■■□ 3.47
CDK9-202ENST00000421939 POLR3GLQ9BT43 218 aa36.66■■■■□ 3.46
CDK9-202ENST00000421939 USP35Q9P2H5 1018 aa36.66■■■■□ 3.46
CDK9-202ENST00000421939 AXIN2Q9Y2T1 843 aa36.66■■■■□ 3.46
CDK9-202ENST00000421939 LTN1O94822 1766 aa36.66■■■■□ 3.46
CDK9-202ENST00000421939 COG3Q96JB2 828 aa36.65■■■■□ 3.46
CDK9-202ENST00000421939 CRB1P82279 1406 aa36.65■■■■□ 3.46
CDK9-202ENST00000421939 RGPD5Q99666 1765 aa36.63■■■■□ 3.46
CDK9-202ENST00000421939 KRT27Q7Z3Y8 459 aa36.63■■■■□ 3.45
CDK9-202ENST00000421939 KIF20BQ96Q89 1820 aa36.62■■■■□ 3.45
CDK9-202ENST00000421939 NSD3Q9BZ95 1437 aa36.62■■■■□ 3.45
CDK9-202ENST00000421939 TCP11L2Q8N4U5 519 aa36.62■■■■□ 3.45
CDK9-202ENST00000421939 BARGINQ6ZT62 677 aa36.61■■■■□ 3.45
CDK9-202ENST00000421939 WDR17Q8IZU2 1322 aa36.6■■■■□ 3.45
CDK9-202ENST00000421939 CARD14Q9BXL6 1004 aa36.6■■■■□ 3.45
CDK9-202ENST00000421939 FYB1O15117 783 aa36.59■■■■□ 3.45
CDK9-202ENST00000421939 THRAP3Q9Y2W1 955 aaKnown RBP36.59■■■■□ 3.45
CDK9-202ENST00000421939 GGNBP2Q9H3C7 697 aa36.57■■■■□ 3.44
CDK9-202ENST00000421939 TOM1L2Q6ZVM7 507 aa36.56■■■■□ 3.44
CDK9-202ENST00000421939 CSB-PGBD3P0DP91 1061 aa36.54■■■■□ 3.44
CDK9-202ENST00000421939 C11orf95C9JLR9 678 aaPredicted RBP36.52■■■■□ 3.44
CDK9-202ENST00000421939 ERBB3P21860 1342 aa36.5■■■■□ 3.43
CDK9-202ENST00000421939 PARP4Q9UKK3 1724 aaKnown RBP36.5■■■■□ 3.43
CDK9-202ENST00000421939 BLMP54132 1417 aaPredicted RBP36.5■■■■□ 3.43
CDK9-202ENST00000421939 WNK3Q9BYP7 1800 aa36.49■■■■□ 3.43
CDK9-202ENST00000421939 MAP3K19Q56UN5 1328 aa36.49■■■■□ 3.43
CDK9-202ENST00000421939 CCDC125Q86Z20 511 aa36.48■■■■□ 3.43
CDK9-202ENST00000421939 CARD10Q9BWT7 1032 aa36.48■■■■□ 3.43
CDK9-202ENST00000421939 CGNL1Q0VF96 1302 aa36.47■■■■□ 3.43
CDK9-202ENST00000421939 IP6K1Q92551 441 aa36.46■■■■□ 3.43
CDK9-202ENST00000421939 FBLN1P23142 703 aa36.45■■■■□ 3.43
CDK9-202ENST00000421939 RTL1A6NKG5 1358 aa36.43■■■■□ 3.42
CDK9-202ENST00000421939 CCDC7Q96M83 1385 aa36.43■■■■□ 3.42
CDK9-202ENST00000421939 KIF7Q2M1P5 1343 aa36.43■■■■□ 3.42
CDK9-202ENST00000421939 ANKRD24Q8TF21 1146 aa36.43■■■■□ 3.42
CDK9-202ENST00000421939 PANK3Q9H999 370 aa36.43■■■■□ 3.42
CDK9-202ENST00000421939 LRRC37A3O60309 1634 aa36.43■■■■□ 3.42
CDK9-202ENST00000421939 FAM182BQ5T319 152 aa36.42■■■■□ 3.42
CDK9-202ENST00000421939 AMPHP49418 695 aa36.41■■■■□ 3.42
CDK9-202ENST00000421939 PDE3BQ13370 1112 aa36.41■■■■□ 3.42
CDK9-202ENST00000421939 HOXC9P31274 260 aa36.4■■■■□ 3.42
CDK9-202ENST00000421939 RRS1Q15050 365 aaKnown RBP36.4■■■■□ 3.42
CDK9-202ENST00000421939 FAM208AQ9UK61 1670 aaKnown RBP36.39■■■■□ 3.42
CDK9-202ENST00000421939 NLRP2Q9NX02 1062 aa36.39■■■■□ 3.42
CDK9-202ENST00000421939 DISP2A7MBM2 1401 aa36.39■■■■□ 3.42
CDK9-202ENST00000421939 CDCA7Q9BWT1 371 aaPredicted RBP36.38■■■■□ 3.41
CDK9-202ENST00000421939 ANKRD26Q9UPS8 1709 aa36.37■■■■□ 3.41
CDK9-202ENST00000421939 SF3B2Q13435 895 aaKnown RBP36.35■■■■□ 3.41
CDK9-202ENST00000421939 DDB1Q16531 1140 aa36.34■■■■□ 3.41
CDK9-202ENST00000421939 FAM196AQ6ZSG2 479 aa36.34■■■■□ 3.41
CDK9-202ENST00000421939 RGPD1P0DJD0 1748 aa36.34■■■■□ 3.41
CDK9-202ENST00000421939 LTV1Q96GA3 475 aaPredicted RBP36.33■■■■□ 3.41
CDK9-202ENST00000421939 KIF24Q5T7B8 1368 aa36.32■■■■□ 3.4
CDK9-202ENST00000421939 PEAK1Q9H792 1746 aa36.32■■■■□ 3.4
CDK9-202ENST00000421939 FLT4P35916 1363 aa36.3■■■■□ 3.4
CDK9-202ENST00000421939 NSD2O96028 1365 aa36.29■■■■□ 3.4
CDK9-202ENST00000421939 TNS1Q9HBL0 1735 aaKnown RBP36.28■■■■□ 3.4
CDK9-202ENST00000421939 OVOS2A0A0G2JMS6 1433 aa36.27■■■■□ 3.4
CDK9-202ENST00000421939 TNS2Q63HR2 1409 aa36.27■■■■□ 3.4
CDK9-202ENST00000421939 SMG6Q86US8 1419 aaKnown RBP36.26■■■■□ 3.4
CDK9-202ENST00000421939 INSRP06213 1382 aa36.26■■■■□ 3.39
CDK9-202ENST00000421939 DEFB132Q7Z7B7 95 aa36.25■■■■□ 3.39
CDK9-202ENST00000421939 EMILIN1Q9Y6C2 1016 aa36.25■■■■□ 3.39
CDK9-202ENST00000421939 IL2RBP14784 551 aa36.23■■■■□ 3.39
CDK9-202ENST00000421939 KNSTRNQ9Y448 316 aa36.23■■■■□ 3.39
CDK9-202ENST00000421939 TRIM37O94972 964 aa36.22■■■■□ 3.39
CDK9-202ENST00000421939 HSP90AB2PQ58FF8 381 aa36.22■■■■□ 3.39
CDK9-202ENST00000421939 WASHC2AQ641Q2 1341 aa36.22■■■■□ 3.39
CDK9-202ENST00000421939 RGPD2P0DJD1 1756 aa36.22■■■■□ 3.39
CDK9-202ENST00000421939 BAG6P46379 1132 aa36.21■■■■□ 3.39
CDK9-202ENST00000421939 EXOC5O00471 708 aa36.2■■■■□ 3.39
CDK9-202ENST00000421939 MAP2P11137 1827 aaKnown RBP36.2■■■■□ 3.38
CDK9-202ENST00000421939 MARCH10Q8NA82 808 aaPredicted RBP36.19■■■■□ 3.38
CDK9-202ENST00000421939 TNNT2P45379 298 aaPredicted RBP36.18■■■■□ 3.38
CDK9-202ENST00000421939 PPM1GO15355 546 aaPredicted RBP36.17■■■■□ 3.38
CDK9-202ENST00000421939 POLKQ9UBT6 870 aa36.16■■■■□ 3.38
CDK9-202ENST00000421939 BCL9O00512 1426 aa36.16■■■■□ 3.38
CDK9-202ENST00000421939 AMER1Q5JTC6 1135 aaPredicted RBP36.14■■■■□ 3.38
CDK9-202ENST00000421939 NBPF6Q5VWK0 638 aa36.14■■■■□ 3.38
CDK9-202ENST00000421939 NBPF4Q96M43 638 aa36.14■■■■□ 3.38
CDK9-202ENST00000421939 SBF2Q86WG5 1849 aa36.13■■■■□ 3.37
CDK9-202ENST00000421939 MORC1Q86VD1 984 aa36.12■■■■□ 3.37
CDK9-202ENST00000421939 MEGF6O75095 1541 aa36.1■■■■□ 3.37
CDK9-202ENST00000421939 EN1Q05925 392 aaPredicted RBP36.1■■■■□ 3.37
CDK9-202ENST00000421939 USHBP1Q8N6Y0 703 aa36.09■■■■□ 3.37
CDK9-202ENST00000421939 PER1O15534 1290 aaPredicted RBP36.08■■■■□ 3.37
CDK9-202ENST00000421939 APBA3O96018 575 aa36.08■■■■□ 3.37
CDK9-202ENST00000421939 PARD3Q8TEW0 1356 aa36.03■■■■□ 3.36
CDK9-202ENST00000421939 NCAPD2Q15021 1401 aa36.03■■■■□ 3.36
CDK9-202ENST00000421939 RAPGEF4Q8WZA2 1011 aa36.02■■■■□ 3.36
CDK9-202ENST00000421939 BCL11BQ9C0K0 894 aaPredicted RBP36.01■■■■□ 3.36
CDK9-202ENST00000421939 SHANK3Q9BYB0 1731 aa36■■■■□ 3.35
CDK9-202ENST00000421939 EZH2Q15910 746 aaKnown RBP36■■■■□ 3.35
CDK9-202ENST00000421939 CAMKK2Q96RR4 588 aa36■■■■□ 3.35
CDK9-202ENST00000421939 NHSQ6T4R5 1651 aa36■■■■□ 3.35
CDK9-202ENST00000421939 NPC1L1Q9UHC9 1359 aa35.99■■■■□ 3.35
CDK9-202ENST00000421939 ZCRB1Q8TBF4 217 aaKnown RBP35.98■■■■□ 3.35
CDK9-202ENST00000421939 DDX54Q8TDD1 881 aaKnown RBP35.98■■■■□ 3.35
CDK9-202ENST00000421939 TATP17735 454 aaPredicted RBP35.97■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms