RNA–Protein interactions for RNA: ENST00000420453.1

LINC00993-201, long intergenic non-protein coding RNA 993, humanhuman

BASIC

Gene LINC00993, Length 540 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00993-201ENST00000420453 URB2Q14146 1524 aaKnown RBP8.14□□□□□ -1.11
LINC00993-201ENST00000420453 TOPBP1Q92547 1522 aa8.14□□□□□ -1.11
LINC00993-201ENST00000420453 NNTQ13423 1086 aa8.14□□□□□ -1.11
LINC00993-201ENST00000420453 LCE2AQ5TA79 106 aaPredicted RBP8.14□□□□□ -1.11
LINC00993-201ENST00000420453 POM121Q96HA1 1249 aa8.14□□□□□ -1.11
LINC00993-201ENST00000420453 WDR62O43379 1518 aa8.13□□□□□ -1.11
LINC00993-201ENST00000420453 TERTO14746 1132 aaKnown RBP8.13□□□□□ -1.11
LINC00993-201ENST00000420453 BMP1P13497 986 aa8.13□□□□□ -1.11
LINC00993-201ENST00000420453 NFX1Q12986 1120 aaKnown RBP8.13□□□□□ -1.11
LINC00993-201ENST00000420453 MCM6Q14566 821 aa8.13□□□□□ -1.11
LINC00993-201ENST00000420453 ARID5BQ14865 1188 aa8.13□□□□□ -1.11
LINC00993-201ENST00000420453 FOXJ1Q92949 421 aa8.13□□□□□ -1.11
LINC00993-201ENST00000420453 ZMYND15Q9H091 742 aa8.13□□□□□ -1.11
LINC00993-201ENST00000420453 BIVM-ERCC5R4GMW8 1640 aa8.13□□□□□ -1.11
LINC00993-201ENST00000420453 SYNJ1O43426 1573 aa8.13□□□□□ -1.11
LINC00993-201ENST00000420453 PER1O15534 1290 aaPredicted RBP8.12□□□□□ -1.11
LINC00993-201ENST00000420453 AP1G2O75843 785 aa8.12□□□□□ -1.11
LINC00993-201ENST00000420453 CTDSPL2Q05D32 466 aa8.12□□□□□ -1.11
LINC00993-201ENST00000420453 TRIM46Q7Z4K8 759 aa8.12□□□□□ -1.11
LINC00993-201ENST00000420453 BPHLQ86WA6 291 aaPredicted RBP8.12□□□□□ -1.11
LINC00993-201ENST00000420453 THOC2Q8NI27 1593 aaKnown RBP8.12□□□□□ -1.11
LINC00993-201ENST00000420453 ADH1CP00326 375 aa8.11□□□□□ -1.11
LINC00993-201ENST00000420453 SCARF1Q14162 830 aa8.11□□□□□ -1.11
LINC00993-201ENST00000420453 SLC16A10Q8TF71 515 aa8.11□□□□□ -1.11
LINC00993-201ENST00000420453 WDR4P57081 412 aaKnown RBP8.1□□□□□ -1.11
LINC00993-201ENST00000420453 NBPF14Q5TI25 921 aa8.1□□□□□ -1.11
LINC00993-201ENST00000420453 CDK15Q96Q40 435 aa8.1□□□□□ -1.11
LINC00993-201ENST00000420453 POLA1P09884 1462 aaPredicted RBP8.09□□□□□ -1.11
LINC00993-201ENST00000420453 FGD5Q6ZNL6 1462 aa8.09□□□□□ -1.11
LINC00993-201ENST00000420453 MTMR14Q8NCE2 650 aa8.09□□□□□ -1.11
LINC00993-201ENST00000420453 LRRN4Q8WUT4 740 aa8.09□□□□□ -1.11
LINC00993-201ENST00000420453 HMX1Q9NP08 348 aaPredicted RBP8.09□□□□□ -1.11
LINC00993-201ENST00000420453 INSM1Q01101 510 aaPredicted RBP8.08□□□□□ -1.12
LINC00993-201ENST00000420453 FLIIQ13045 1269 aa8.08□□□□□ -1.12
LINC00993-201ENST00000420453 NR5A1Q13285 461 aa8.08□□□□□ -1.12
LINC00993-201ENST00000420453 ZFP42Q96MM3 310 aa8.08□□□□□ -1.12
LINC00993-201ENST00000420453 NXF1Q9UBU9 619 aaKnown RBP8.08□□□□□ -1.12
LINC00993-201ENST00000420453 WIPF1O43516 503 aa8.07□□□□□ -1.12
LINC00993-201ENST00000420453 TIMP2P16035 220 aa8.07□□□□□ -1.12
LINC00993-201ENST00000420453 TMEM259Q4ZIN3 620 aa8.07□□□□□ -1.12
LINC00993-201ENST00000420453 MRPL14Q6P1L8 145 aaKnown RBP8.07□□□□□ -1.12
LINC00993-201ENST00000420453 EPS8L1Q8TE68 723 aa8.07□□□□□ -1.12
LINC00993-201ENST00000420453 CUX2O14529 1486 aa8.06□□□□□ -1.12
LINC00993-201ENST00000420453 SOGA1O94964 1423 aa8.06□□□□□ -1.12
LINC00993-201ENST00000420453 IFT140Q96RY7 1462 aa8.06□□□□□ -1.12
LINC00993-201ENST00000420453 ABCA10Q8WWZ4 1543 aa8.05□□□□□ -1.12
LINC00993-201ENST00000420453 ZIC2O95409 532 aaPredicted RBP8.05□□□□□ -1.12
LINC00993-201ENST00000420453 USP17L8P0C7I0 530 aa8.05□□□□□ -1.12
LINC00993-201ENST00000420453 UBTFP17480 764 aaKnown RBP8.05□□□□□ -1.12
LINC00993-201ENST00000420453 C4orf48Q5BLP8 95 aa8.05□□□□□ -1.12
LINC00993-201ENST00000420453 NPAS3Q8IXF0 933 aa8.05□□□□□ -1.12
LINC00993-201ENST00000420453 BANK1Q8NDB2 785 aa8.05□□□□□ -1.12
LINC00993-201ENST00000420453 GPKOWQ92917 476 aaPredicted RBP eCLIP8.05□□□□□ -1.12
LINC00993-201ENST00000420453 EEA1Q15075 1411 aa8.04□□□□□ -1.12
LINC00993-201ENST00000420453 MAGEB6P1A0A0J9YX57 407 aa8.04□□□□□ -1.12
LINC00993-201ENST00000420453 ARID3CA6NKF2 412 aa8.04□□□□□ -1.12
LINC00993-201ENST00000420453 UPP2O95045 317 aa8.04□□□□□ -1.12
LINC00993-201ENST00000420453 VASH1Q7L8A9 365 aaPredicted RBP8.04□□□□□ -1.12
LINC00993-201ENST00000420453 GJD4Q96KN9 370 aaPredicted RBP8.04□□□□□ -1.12
LINC00993-201ENST00000420453 PURBQ96QR8 312 aaKnown RBP8.04□□□□□ -1.12
LINC00993-201ENST00000420453 KLF16Q9BXK1 252 aaPredicted RBP8.04□□□□□ -1.12
LINC00993-201ENST00000420453 C1orf115Q9H7X2 142 aa8.04□□□□□ -1.12
LINC00993-201ENST00000420453 COG6Q9Y2V7 657 aa8.04□□□□□ -1.12
LINC00993-201ENST00000420453 GRM5P41594 1212 aa8.03□□□□□ -1.12
LINC00993-201ENST00000420453 ERICH6Q7L0X2 663 aa8.03□□□□□ -1.12
LINC00993-201ENST00000420453 GDPD2Q9HCC8 539 aa8.03□□□□□ -1.12
LINC00993-201ENST00000420453 STK17AQ9UEE5 414 aa8.03□□□□□ -1.12
LINC00993-201ENST00000420453 WDR97A6NE52 1622 aa8.03□□□□□ -1.12
LINC00993-201ENST00000420453 RAD54L2Q9Y4B4 1467 aa8.02□□□□□ -1.13
LINC00993-201ENST00000420453 SH3BP5LQ7L8J4 393 aa8.02□□□□□ -1.13
LINC00993-201ENST00000420453 SH3RF1Q7Z6J0 888 aa8.02□□□□□ -1.13
LINC00993-201ENST00000420453 IRF7Q92985 503 aa8.02□□□□□ -1.13
LINC00993-201ENST00000420453 ITPKCQ96DU7 683 aa8.02□□□□□ -1.13
LINC00993-201ENST00000420453 C1QTNF2Q9BXJ5 285 aa8.02□□□□□ -1.13
LINC00993-201ENST00000420453 TRIM34Q9BYJ4 488 aa8.02□□□□□ -1.13
LINC00993-201ENST00000420453 ZFAND3Q9H8U3 227 aa8.02□□□□□ -1.13
LINC00993-201ENST00000420453 TARBP1Q13395 1621 aaKnown RBP8.02□□□□□ -1.13
LINC00993-201ENST00000420453 KIF27Q86VH2 1401 aa8.02□□□□□ -1.13
LINC00993-201ENST00000420453 NR3C2P08235 984 aa8.01□□□□□ -1.13
LINC00993-201ENST00000420453 FSHRP23945 695 aa8.01□□□□□ -1.13
LINC00993-201ENST00000420453 TRMT44Q8IYL2 757 aaKnown RBP8.01□□□□□ -1.13
LINC00993-201ENST00000420453 FNBP4Q8N3X1 1017 aaPredicted RBP8.01□□□□□ -1.13
LINC00993-201ENST00000420453 CARD14Q9BXL6 1004 aa8.01□□□□□ -1.13
LINC00993-201ENST00000420453 TBC1D2BQ9UPU7 963 aa8.01□□□□□ -1.13
LINC00993-201ENST00000420453 MAP4K5Q9Y4K4 846 aa8.01□□□□□ -1.13
LINC00993-201ENST00000420453 GPR37L1O60883 481 aa8□□□□□ -1.13
LINC00993-201ENST00000420453 NR6A1Q15406 480 aa8□□□□□ -1.13
LINC00993-201ENST00000420453 C6orf118Q5T5N4 469 aa8□□□□□ -1.13
LINC00993-201ENST00000420453 A6NJR5 290 aa7.99□□□□□ -1.13
LINC00993-201ENST00000420453 H3BM21 787 aa7.99□□□□□ -1.13
LINC00993-201ENST00000420453 TRAK2O60296 914 aa7.99□□□□□ -1.13
LINC00993-201ENST00000420453 MAN1A2O60476 641 aa7.99□□□□□ -1.13
LINC00993-201ENST00000420453 BMP2P12643 396 aa7.99□□□□□ -1.13
LINC00993-201ENST00000420453 VEGFBP49765 207 aa7.99□□□□□ -1.13
LINC00993-201ENST00000420453 PDXDC2PQ6P474 469 aa7.99□□□□□ -1.13
LINC00993-201ENST00000420453 ARHGAP9Q9BRR9 750 aa7.99□□□□□ -1.13
LINC00993-201ENST00000420453 FKBPLQ9UIM3 349 aa7.99□□□□□ -1.13
LINC00993-201ENST00000420453 ZNF777Q9ULD5 760 aaPredicted RBP7.99□□□□□ -1.13
LINC00993-201ENST00000420453 EMILIN1Q9Y6C2 1016 aa7.99□□□□□ -1.13
LINC00993-201ENST00000420453 LCE2CQ5TA81 110 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms