RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 SPDYE2BA6NHP3 402 aa10.96□□□□□ -0.65
MDC1-203ENST00000417033 SPDYE6P0CI01 402 aa10.96□□□□□ -0.65
MDC1-203ENST00000417033 PPP2R1AP30153 589 aa10.96□□□□□ -0.65
MDC1-203ENST00000417033 SPDYE2Q495Y8 402 aa10.96□□□□□ -0.65
MDC1-203ENST00000417033 ILDR2Q71H61 639 aa10.96□□□□□ -0.65
MDC1-203ENST00000417033 EMILIN1Q9Y6C2 1016 aa10.96□□□□□ -0.65
MDC1-203ENST00000417033 PEAK1Q9H792 1746 aa10.95□□□□□ -0.66
MDC1-203ENST00000417033 MAP3K19Q56UN5 1328 aa10.95□□□□□ -0.66
MDC1-203ENST00000417033 ZBTB7CA1YPR0 619 aa10.95□□□□□ -0.66
MDC1-203ENST00000417033 GCP02774 474 aa10.95□□□□□ -0.66
MDC1-203ENST00000417033 ZC3H6P61129 1189 aaKnown RBP10.95□□□□□ -0.66
MDC1-203ENST00000417033 SHPRHQ149N8 1683 aa10.95□□□□□ -0.66
MDC1-203ENST00000417033 LRP6O75581 1613 aa10.95□□□□□ -0.66
MDC1-203ENST00000417033 AATKQ6ZMQ8 1374 aa10.94□□□□□ -0.66
MDC1-203ENST00000417033 JCADQ9P266 1359 aa10.94□□□□□ -0.66
MDC1-203ENST00000417033 NUTM2BA6NNL0 878 aaPredicted RBP10.94□□□□□ -0.66
MDC1-203ENST00000417033 NUTM2EB1AL46 878 aaPredicted RBP10.94□□□□□ -0.66
MDC1-203ENST00000417033 RALBP1Q15311 655 aa10.94□□□□□ -0.66
MDC1-203ENST00000417033 NUTM2AQ8IVF1 878 aaPredicted RBP10.94□□□□□ -0.66
MDC1-203ENST00000417033 POLKQ9UBT6 870 aa10.94□□□□□ -0.66
MDC1-203ENST00000417033 SMG6Q86US8 1419 aaKnown RBP10.93□□□□□ -0.66
MDC1-203ENST00000417033 KIAA0232Q92628 1395 aa10.93□□□□□ -0.66
MDC1-203ENST00000417033 MYBBP1AQ9BQG0 1328 aaKnown RBP10.93□□□□□ -0.66
MDC1-203ENST00000417033 CHRNA2Q15822 529 aa10.93□□□□□ -0.66
MDC1-203ENST00000417033 PPM1GO15355 546 aaPredicted RBP10.92□□□□□ -0.66
MDC1-203ENST00000417033 MTHFSP49914 203 aa10.92□□□□□ -0.66
MDC1-203ENST00000417033 HAP1P54257 671 aaPredicted RBP10.92□□□□□ -0.66
MDC1-203ENST00000417033 ARHGEF25Q86VW2 580 aa10.92□□□□□ -0.66
MDC1-203ENST00000417033 COL3A1P02461 1466 aaPredicted RBP10.92□□□□□ -0.66
MDC1-203ENST00000417033 ADAMTS2O95450 1211 aa10.91□□□□□ -0.66
MDC1-203ENST00000417033 KCNH5Q8NCM2 988 aa10.91□□□□□ -0.66
MDC1-203ENST00000417033 LTN1O94822 1766 aa10.9□□□□□ -0.66
MDC1-203ENST00000417033 CDK12Q9NYV4 1490 aaPredicted RBP10.9□□□□□ -0.66
MDC1-203ENST00000417033 PROM2Q8N271 834 aa10.9□□□□□ -0.66
MDC1-203ENST00000417033 MAP2P11137 1827 aaKnown RBP10.9□□□□□ -0.66
MDC1-203ENST00000417033 COL18A1P39060 1754 aa10.9□□□□□ -0.67
MDC1-203ENST00000417033 CPDO75976 1380 aa10.9□□□□□ -0.67
MDC1-203ENST00000417033 FAM83GA6ND36 823 aa10.89□□□□□ -0.67
MDC1-203ENST00000417033 HOXC9P31274 260 aa10.89□□□□□ -0.67
MDC1-203ENST00000417033 AMPHP49418 695 aa10.89□□□□□ -0.67
MDC1-203ENST00000417033 HSP90AB2PQ58FF8 381 aa10.89□□□□□ -0.67
MDC1-203ENST00000417033 PRDM11Q9NQV5 511 aa10.89□□□□□ -0.67
MDC1-203ENST00000417033 AXIN2Q9Y2T1 843 aa10.89□□□□□ -0.67
MDC1-203ENST00000417033 LMO7Q8WWI1 1683 aa10.89□□□□□ -0.67
MDC1-203ENST00000417033 CAMTA1Q9Y6Y1 1673 aa10.88□□□□□ -0.67
MDC1-203ENST00000417033 RTL1A6NKG5 1358 aa10.88□□□□□ -0.67
MDC1-203ENST00000417033 FLT4P35916 1363 aa10.88□□□□□ -0.67
MDC1-203ENST00000417033 SPATA31A6Q5VVP1 1343 aa10.87□□□□□ -0.67
MDC1-203ENST00000417033 IP6K1Q92551 441 aa10.87□□□□□ -0.67
MDC1-203ENST00000417033 LTV1Q96GA3 475 aaPredicted RBP10.87□□□□□ -0.67
MDC1-203ENST00000417033 MRS2Q9HD23 443 aa10.87□□□□□ -0.67
MDC1-203ENST00000417033 RGPD5Q99666 1765 aa10.86□□□□□ -0.67
MDC1-203ENST00000417033 EIF4A2Q14240 407 aaKnown RBP10.86□□□□□ -0.67
MDC1-203ENST00000417033 SSUH2Q9Y2M2 353 aa10.86□□□□□ -0.67
MDC1-203ENST00000417033 C8orf37Q96NL8 207 aa10.85□□□□□ -0.67
MDC1-203ENST00000417033 RBM42Q9BTD8 480 aaKnown RBP10.85□□□□□ -0.67
MDC1-203ENST00000417033 FBXO3Q9UK99 471 aa10.85□□□□□ -0.67
MDC1-203ENST00000417033 INSRP06213 1382 aa10.85□□□□□ -0.67
MDC1-203ENST00000417033 PLCH1Q4KWH8 1693 aa10.85□□□□□ -0.67
MDC1-203ENST00000417033 COL14A1Q05707 1796 aaKnown RBP10.85□□□□□ -0.67
MDC1-203ENST00000417033 CCER2I3L3R5 266 aa10.84□□□□□ -0.67
MDC1-203ENST00000417033 IL13P35225 146 aa10.84□□□□□ -0.67
MDC1-203ENST00000417033 USHBP1Q8N6Y0 703 aa10.84□□□□□ -0.67
MDC1-203ENST00000417033 ANKRD24Q8TF21 1146 aa10.84□□□□□ -0.67
MDC1-203ENST00000417033 BTG4Q9NY30 223 aa10.84□□□□□ -0.67
MDC1-203ENST00000417033 KIF24Q5T7B8 1368 aa10.84□□□□□ -0.67
MDC1-203ENST00000417033 COL5A2P05997 1499 aaPredicted RBP10.84□□□□□ -0.67
MDC1-203ENST00000417033 SLIT2O94813 1529 aa10.84□□□□□ -0.67
MDC1-203ENST00000417033 ABCC6O95255 1503 aa10.84□□□□□ -0.67
MDC1-203ENST00000417033 BLMP54132 1417 aaPredicted RBP10.84□□□□□ -0.67
MDC1-203ENST00000417033 ERBB3P21860 1342 aa10.84□□□□□ -0.67
MDC1-203ENST00000417033 CFAP53Q96M91 514 aa10.83□□□□□ -0.68
MDC1-203ENST00000417033 STRN4Q9NRL3 753 aa10.83□□□□□ -0.68
MDC1-203ENST00000417033 NRAPQ86VF7 1730 aa10.83□□□□□ -0.68
MDC1-203ENST00000417033 RGPD2P0DJD1 1756 aa10.82□□□□□ -0.68
MDC1-203ENST00000417033 RGPD1P0DJD0 1748 aa10.82□□□□□ -0.68
MDC1-203ENST00000417033 U2SURPO15042 1029 aaKnown RBP10.82□□□□□ -0.68
MDC1-203ENST00000417033 DIAPH1O60610 1272 aaKnown RBP10.82□□□□□ -0.68
MDC1-203ENST00000417033 MEX3CQ5U5Q3 659 aaKnown RBP10.82□□□□□ -0.68
MDC1-203ENST00000417033 LARP1Q6PKG0 1096 aaKnown RBP10.82□□□□□ -0.68
MDC1-203ENST00000417033 AEBP1Q8IUX7 1158 aa10.82□□□□□ -0.68
MDC1-203ENST00000417033 PNISRQ8TF01 805 aaKnown RBP10.82□□□□□ -0.68
MDC1-203ENST00000417033 EYA1Q99502 592 aa10.82□□□□□ -0.68
MDC1-203ENST00000417033 SENP3-EIF4A1A0A087X0R7 540 aa10.81□□□□□ -0.68
MDC1-203ENST00000417033 NBPF6Q5VWK0 638 aa10.81□□□□□ -0.68
MDC1-203ENST00000417033 NGLY1Q96IV0 654 aa10.81□□□□□ -0.68
MDC1-203ENST00000417033 NBPF4Q96M43 638 aa10.81□□□□□ -0.68
MDC1-203ENST00000417033 BCL9LQ86UU0 1499 aa10.81□□□□□ -0.68
MDC1-203ENST00000417033 HMOX1P09601 288 aa10.8□□□□□ -0.68
MDC1-203ENST00000417033 CSB-PGBD3P0DP91 1061 aa10.8□□□□□ -0.68
MDC1-203ENST00000417033 FAM9BQ8IZU0 186 aa10.8□□□□□ -0.68
MDC1-203ENST00000417033 AFF2P51816 1311 aa10.8□□□□□ -0.68
MDC1-203ENST00000417033 WDR17Q8IZU2 1322 aa10.8□□□□□ -0.68
MDC1-203ENST00000417033 IGSF1Q8N6C5 1336 aa10.8□□□□□ -0.68
MDC1-203ENST00000417033 FAM208AQ9UK61 1670 aaKnown RBP10.79□□□□□ -0.68
MDC1-203ENST00000417033 U2AF1L5P0DN76 240 aaPredicted RBP10.79□□□□□ -0.68
MDC1-203ENST00000417033 U2AF1Q01081 240 aaKnown RBP eCLIP10.79□□□□□ -0.68
MDC1-203ENST00000417033 FNBP4Q8N3X1 1017 aaPredicted RBP10.79□□□□□ -0.68
MDC1-203ENST00000417033 NLRP2Q9NX02 1062 aa10.79□□□□□ -0.68
MDC1-203ENST00000417033 ADAMTS8Q9UP79 889 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms