RNA–Protein interactions for RNA: ENST00000415891.5

CLIP4-205, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-205ENST00000415891 TIMM44O43615 452 aa8.19□□□□□ -1.1
CLIP4-205ENST00000415891 HMMRO75330 724 aa8.19□□□□□ -1.1
CLIP4-205ENST00000415891 SKIV2LQ15477 1246 aaKnown RBP8.19□□□□□ -1.1
CLIP4-205ENST00000415891 SWT1Q5T5J6 900 aaKnown RBP8.19□□□□□ -1.1
CLIP4-205ENST00000415891 C16orf87Q6PH81 154 aa8.19□□□□□ -1.1
CLIP4-205ENST00000415891 ERCC4Q92889 916 aaPredicted RBP8.19□□□□□ -1.1
CLIP4-205ENST00000415891 QTRT2Q9H974 415 aaKnown RBP8.19□□□□□ -1.1
CLIP4-205ENST00000415891 ESPNB1AK53 854 aa8.18□□□□□ -1.1
CLIP4-205ENST00000415891 U2AF1L5P0DN76 240 aaPredicted RBP8.18□□□□□ -1.1
CLIP4-205ENST00000415891 U2AF1Q01081 240 aaKnown RBP eCLIP8.18□□□□□ -1.1
CLIP4-205ENST00000415891 BIRC2Q13490 618 aa8.18□□□□□ -1.1
CLIP4-205ENST00000415891 NKX1-1Q15270 411 aaPredicted RBP8.18□□□□□ -1.1
CLIP4-205ENST00000415891 E2F5Q15329 346 aa8.18□□□□□ -1.1
CLIP4-205ENST00000415891 CCDC70Q6NSX1 233 aa8.18□□□□□ -1.1
CLIP4-205ENST00000415891 ZSCAN30Q86W11 494 aa8.18□□□□□ -1.1
CLIP4-205ENST00000415891 ANKRD13BQ86YJ7 626 aa8.18□□□□□ -1.1
CLIP4-205ENST00000415891 IPO9Q96P70 1041 aaKnown RBP8.18□□□□□ -1.1
CLIP4-205ENST00000415891 MED4Q9NPJ6 270 aa8.18□□□□□ -1.1
CLIP4-205ENST00000415891 PAXBP1Q9Y5B6 917 aa8.18□□□□□ -1.1
CLIP4-205ENST00000415891 RBM5P52756 815 aaKnown RBP eCLIP8.18□□□□□ -1.1
CLIP4-205ENST00000415891 PTPROQ16827 1216 aa8.18□□□□□ -1.1
CLIP4-205ENST00000415891 PCGF5Q86SE9 256 aa8.18□□□□□ -1.1
CLIP4-205ENST00000415891 NEUROD6Q96NK8 337 aa8.18□□□□□ -1.1
CLIP4-205ENST00000415891 RPS6KC1Q96S38 1066 aa8.18□□□□□ -1.1
CLIP4-205ENST00000415891 DIS3Q9Y2L1 958 aaKnown RBP8.18□□□□□ -1.1
CLIP4-205ENST00000415891 GIGYF1O75420 1035 aaPredicted RBP8.17□□□□□ -1.1
CLIP4-205ENST00000415891 LRCH2Q5VUJ6 765 aa8.17□□□□□ -1.1
CLIP4-205ENST00000415891 FNBP4Q8N3X1 1017 aaPredicted RBP8.17□□□□□ -1.1
CLIP4-205ENST00000415891 DCAF11Q8TEB1 546 aa8.17□□□□□ -1.1
CLIP4-205ENST00000415891 ZNF396Q96N95 335 aaPredicted RBP8.17□□□□□ -1.1
CLIP4-205ENST00000415891 CHCHD3Q9NX63 227 aaKnown RBP8.17□□□□□ -1.1
CLIP4-205ENST00000415891 TULP2O00295 520 aa8.17□□□□□ -1.1
CLIP4-205ENST00000415891 KCNA2P16389 499 aa8.17□□□□□ -1.1
CLIP4-205ENST00000415891 TRPC1P48995 793 aa8.17□□□□□ -1.1
CLIP4-205ENST00000415891 PDAP1Q13442 181 aaKnown RBP8.17□□□□□ -1.1
CLIP4-205ENST00000415891 NYAP1Q6ZVC0 841 aa8.17□□□□□ -1.1
CLIP4-205ENST00000415891 PROSER2Q86WR7 435 aaPredicted RBP8.17□□□□□ -1.1
CLIP4-205ENST00000415891 IFT122Q9HBG6 1241 aa8.17□□□□□ -1.1
CLIP4-205ENST00000415891 IL16Q14005 1332 aa8.16□□□□□ -1.1
CLIP4-205ENST00000415891 GTPBP6O43824 516 aaPredicted RBP8.16□□□□□ -1.1
CLIP4-205ENST00000415891 ZC3H6P61129 1189 aaKnown RBP8.16□□□□□ -1.1
CLIP4-205ENST00000415891 KIAA2012Q0VF49 1180 aa8.16□□□□□ -1.1
CLIP4-205ENST00000415891 VPS37AQ8NEZ2 397 aa8.16□□□□□ -1.1
CLIP4-205ENST00000415891 CCDC47Q96A33 483 aaKnown RBP8.16□□□□□ -1.1
CLIP4-205ENST00000415891 CDC5LQ99459 802 aaKnown RBP8.16□□□□□ -1.1
CLIP4-205ENST00000415891 SCINQ9Y6U3 715 aa8.16□□□□□ -1.1
CLIP4-205ENST00000415891 HOXA2O43364 376 aa8.15□□□□□ -1.1
CLIP4-205ENST00000415891 RASSF7Q02833 373 aa8.15□□□□□ -1.1
CLIP4-205ENST00000415891 AMOTQ4VCS5 1084 aa8.15□□□□□ -1.1
CLIP4-205ENST00000415891 NAALADL2Q58DX5 795 aa8.15□□□□□ -1.1
CLIP4-205ENST00000415891 KLHL23Q8NBE8 558 aa8.15□□□□□ -1.1
CLIP4-205ENST00000415891 KCNB2Q92953 911 aa8.15□□□□□ -1.1
CLIP4-205ENST00000415891 SPACA7Q96KW9 195 aa8.15□□□□□ -1.1
CLIP4-205ENST00000415891 CEP63Q96MT8 703 aa8.15□□□□□ -1.1
CLIP4-205ENST00000415891 MUC3BQ9H195 1237 aa8.15□□□□□ -1.1
CLIP4-205ENST00000415891 IQSEC3Q9UPP2 1182 aaPredicted RBP8.15□□□□□ -1.1
CLIP4-205ENST00000415891 EGFLAMQ63HQ2 1017 aa8.15□□□□□ -1.1
CLIP4-205ENST00000415891 KLHL10Q6JEL2 608 aa8.15□□□□□ -1.1
CLIP4-205ENST00000415891 CTR9Q6PD62 1173 aa8.15□□□□□ -1.1
CLIP4-205ENST00000415891 IQCF2Q8IXL9 164 aa8.15□□□□□ -1.1
CLIP4-205ENST00000415891 GAS2L2Q8NHY3 880 aa8.15□□□□□ -1.1
CLIP4-205ENST00000415891 ZNF232Q9UNY5 417 aa8.15□□□□□ -1.1
CLIP4-205ENST00000415891 KNSTRNQ9Y448 316 aa8.15□□□□□ -1.1
CLIP4-205ENST00000415891 FAM163BP0C2L3 166 aa8.14□□□□□ -1.11
CLIP4-205ENST00000415891 LMNB1P20700 586 aa8.14□□□□□ -1.11
CLIP4-205ENST00000415891 KCNJ4P48050 445 aa8.14□□□□□ -1.11
CLIP4-205ENST00000415891 CCAR1Q8IX12 1150 aaKnown RBP8.14□□□□□ -1.11
CLIP4-205ENST00000415891 AGAP3Q96P47 875 aa8.14□□□□□ -1.11
CLIP4-205ENST00000415891 BRMS1Q9HCU9 246 aa8.14□□□□□ -1.11
CLIP4-205ENST00000415891 PRR12Q9ULL5 1215 aa8.14□□□□□ -1.11
CLIP4-205ENST00000415891 CARNS1A5YM72 827 aa8.14□□□□□ -1.11
CLIP4-205ENST00000415891 CC2D1AQ6P1N0 951 aaPredicted RBP8.14□□□□□ -1.11
CLIP4-205ENST00000415891 CATIPQ7Z7H3 387 aa8.14□□□□□ -1.11
CLIP4-205ENST00000415891 PABPN1Q86U42 306 aaKnown RBP eCLIP8.14□□□□□ -1.11
CLIP4-205ENST00000415891 TMC1Q8TDI8 760 aa8.14□□□□□ -1.11
CLIP4-205ENST00000415891 FRAT1Q92837 279 aaPredicted RBP8.14□□□□□ -1.11
CLIP4-205ENST00000415891 LZTS2Q9BRK4 669 aa8.14□□□□□ -1.11
CLIP4-205ENST00000415891 RMI1Q9H9A7 625 aa8.14□□□□□ -1.11
CLIP4-205ENST00000415891 PLSCR2Q9NRY7 297 aa8.14□□□□□ -1.11
CLIP4-205ENST00000415891 UTP6Q9NYH9 597 aaKnown RBP8.14□□□□□ -1.11
CLIP4-205ENST00000415891 DDX49Q9Y6V7 483 aaKnown RBP8.14□□□□□ -1.11
CLIP4-205ENST00000415891 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.13□□□□□ -1.11
CLIP4-205ENST00000415891 ANKRD33BA6NCL7 494 aa8.13□□□□□ -1.11
CLIP4-205ENST00000415891 TBX4P57082 545 aa8.13□□□□□ -1.11
CLIP4-205ENST00000415891 RASA3Q14644 834 aa8.13□□□□□ -1.11
CLIP4-205ENST00000415891 TSNAXIP1Q2TAA8 658 aa8.13□□□□□ -1.11
CLIP4-205ENST00000415891 POLR3CQ9BUI4 534 aaPredicted RBP8.13□□□□□ -1.11
CLIP4-205ENST00000415891 KIF5CO60282 957 aa8.13□□□□□ -1.11
CLIP4-205ENST00000415891 NBPF7P0C2Y1 421 aaPredicted RBP8.13□□□□□ -1.11
CLIP4-205ENST00000415891 CCDC15Q0P6D6 951 aa8.13□□□□□ -1.11
CLIP4-205ENST00000415891 CCDC92Q53HC0 331 aaPredicted RBP8.13□□□□□ -1.11
CLIP4-205ENST00000415891 DUSP27Q5VZP5 1158 aa8.13□□□□□ -1.11
CLIP4-205ENST00000415891 ZNF512BQ96KM6 892 aaPredicted RBP8.13□□□□□ -1.11
CLIP4-205ENST00000415891 TEX13AQ9BXU3 409 aaPredicted RBP8.13□□□□□ -1.11
CLIP4-205ENST00000415891 MAGEA8P43361 318 aa8.12□□□□□ -1.11
CLIP4-205ENST00000415891 GTF2A1P52655 376 aaPredicted RBP8.12□□□□□ -1.11
CLIP4-205ENST00000415891 XPCQ01831 940 aaPredicted RBP8.12□□□□□ -1.11
CLIP4-205ENST00000415891 SKAP1Q86WV1 359 aa8.12□□□□□ -1.11
CLIP4-205ENST00000415891 PHC3Q8NDX5 983 aa8.12□□□□□ -1.11
CLIP4-205ENST00000415891 FMNL2Q96PY5 1086 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms