RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 NRAPQ86VF7 1730 aa17.71■□□□□ 0.42
CNOT4-204ENST00000414802 CCDC184Q52MB2 194 aa17.71■□□□□ 0.42
CNOT4-204ENST00000414802 ABCC6O95255 1503 aa17.7■□□□□ 0.42
CNOT4-204ENST00000414802 AMPHP49418 695 aa17.7■□□□□ 0.42
CNOT4-204ENST00000414802 PRDM11Q9NQV5 511 aa17.7■□□□□ 0.42
CNOT4-204ENST00000414802 SPATA31A6Q5VVP1 1343 aa17.7■□□□□ 0.42
CNOT4-204ENST00000414802 RTL1A6NKG5 1358 aa17.7■□□□□ 0.42
CNOT4-204ENST00000414802 FLT4P35916 1363 aa17.7■□□□□ 0.42
CNOT4-204ENST00000414802 NWD2Q9ULI1 1742 aa17.69■□□□□ 0.42
CNOT4-204ENST00000414802 FAM208AQ9UK61 1670 aaKnown RBP17.68■□□□□ 0.42
CNOT4-204ENST00000414802 CAMTA1Q9Y6Y1 1673 aa17.68■□□□□ 0.42
CNOT4-204ENST00000414802 HOXC9P31274 260 aa17.67■□□□□ 0.42
CNOT4-204ENST00000414802 HSP90AB2PQ58FF8 381 aa17.67■□□□□ 0.42
CNOT4-204ENST00000414802 RGPD1P0DJD0 1748 aa17.66■□□□□ 0.42
CNOT4-204ENST00000414802 AXIN2Q9Y2T1 843 aa17.66■□□□□ 0.42
CNOT4-204ENST00000414802 FAM83GA6ND36 823 aa17.65■□□□□ 0.42
CNOT4-204ENST00000414802 IP6K1Q92551 441 aa17.65■□□□□ 0.42
CNOT4-204ENST00000414802 KIF24Q5T7B8 1368 aa17.65■□□□□ 0.42
CNOT4-204ENST00000414802 LTV1Q96GA3 475 aaPredicted RBP17.64■□□□□ 0.42
CNOT4-204ENST00000414802 MRS2Q9HD23 443 aa17.64■□□□□ 0.42
CNOT4-204ENST00000414802 BLMP54132 1417 aaPredicted RBP17.64■□□□□ 0.41
CNOT4-204ENST00000414802 INSRP06213 1382 aa17.64■□□□□ 0.41
CNOT4-204ENST00000414802 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.64■□□□□ 0.41
CNOT4-204ENST00000414802 CFAP53Q96M91 514 aa17.64■□□□□ 0.41
CNOT4-204ENST00000414802 COL5A2P05997 1499 aaPredicted RBP17.63■□□□□ 0.41
CNOT4-204ENST00000414802 MEX3CQ5U5Q3 659 aaKnown RBP17.63■□□□□ 0.41
CNOT4-204ENST00000414802 C8orf37Q96NL8 207 aa17.63■□□□□ 0.41
CNOT4-204ENST00000414802 WNK3Q9BYP7 1800 aa17.62■□□□□ 0.41
CNOT4-204ENST00000414802 EIF4A2Q14240 407 aaKnown RBP17.61■□□□□ 0.41
CNOT4-204ENST00000414802 ILDR1Q86SU0 546 aaPredicted RBP17.61■□□□□ 0.41
CNOT4-204ENST00000414802 SLIT2O94813 1529 aa17.61■□□□□ 0.41
CNOT4-204ENST00000414802 CCER2I3L3R5 266 aa17.61■□□□□ 0.41
CNOT4-204ENST00000414802 ANKRD24Q8TF21 1146 aa17.61■□□□□ 0.41
CNOT4-204ENST00000414802 BTG4Q9NY30 223 aa17.61■□□□□ 0.41
CNOT4-204ENST00000414802 ERBB3P21860 1342 aa17.59■□□□□ 0.41
CNOT4-204ENST00000414802 DIAPH1O60610 1272 aaKnown RBP17.59■□□□□ 0.41
CNOT4-204ENST00000414802 STRN4Q9NRL3 753 aa17.59■□□□□ 0.41
CNOT4-204ENST00000414802 IL13P35225 146 aa17.58■□□□□ 0.41
CNOT4-204ENST00000414802 NGLY1Q96IV0 654 aa17.58■□□□□ 0.41
CNOT4-204ENST00000414802 U2SURPO15042 1029 aaKnown RBP17.57■□□□□ 0.4
CNOT4-204ENST00000414802 CSB-PGBD3P0DP91 1061 aa17.57■□□□□ 0.4
CNOT4-204ENST00000414802 USHBP1Q8N6Y0 703 aa17.56■□□□□ 0.4
CNOT4-204ENST00000414802 AFF2P51816 1311 aa17.56■□□□□ 0.4
CNOT4-204ENST00000414802 BCL9LQ86UU0 1499 aa17.55■□□□□ 0.4
CNOT4-204ENST00000414802 LARP1Q6PKG0 1096 aaKnown RBP17.55■□□□□ 0.4
CNOT4-204ENST00000414802 WDR17Q8IZU2 1322 aa17.54■□□□□ 0.4
CNOT4-204ENST00000414802 EVA1CP58658 441 aa17.54■□□□□ 0.4
CNOT4-204ENST00000414802 WDR43Q15061 677 aaKnown RBP eCLIP17.54■□□□□ 0.4
CNOT4-204ENST00000414802 EYA1Q99502 592 aa17.54■□□□□ 0.4
CNOT4-204ENST00000414802 PARP4Q9UKK3 1724 aaKnown RBP17.53■□□□□ 0.4
CNOT4-204ENST00000414802 NBPF6Q5VWK0 638 aa17.53■□□□□ 0.4
CNOT4-204ENST00000414802 AEBP1Q8IUX7 1158 aa17.53■□□□□ 0.4
CNOT4-204ENST00000414802 FAM9BQ8IZU0 186 aa17.53■□□□□ 0.4
CNOT4-204ENST00000414802 NBPF4Q96M43 638 aa17.53■□□□□ 0.4
CNOT4-204ENST00000414802 NLRP2Q9NX02 1062 aa17.53■□□□□ 0.4
CNOT4-204ENST00000414802 NUDCQ9Y266 331 aa17.53■□□□□ 0.4
CNOT4-204ENST00000414802 DLG5Q8TDM6 1919 aa17.52■□□□□ 0.4
CNOT4-204ENST00000414802 HMOX1P09601 288 aa17.52■□□□□ 0.4
CNOT4-204ENST00000414802 U2AF1L5P0DN76 240 aaPredicted RBP17.52■□□□□ 0.4
CNOT4-204ENST00000414802 U2AF1Q01081 240 aaKnown RBP eCLIP17.52■□□□□ 0.43e-20■■■■■ 41.5
CNOT4-204ENST00000414802 TOM1L2Q6ZVM7 507 aa17.52■□□□□ 0.4
CNOT4-204ENST00000414802 PNISRQ8TF01 805 aaKnown RBP17.52■□□□□ 0.4
CNOT4-204ENST00000414802 IGSF1Q8N6C5 1336 aa17.52■□□□□ 0.4
CNOT4-204ENST00000414802 VIRMAQ69YN4 1812 aaKnown RBP17.52■□□□□ 0.39
CNOT4-204ENST00000414802 CRB1P82279 1406 aa17.52■□□□□ 0.39
CNOT4-204ENST00000414802 FNBP4Q8N3X1 1017 aaPredicted RBP17.52■□□□□ 0.39
CNOT4-204ENST00000414802 USP21Q9UK80 565 aa17.52■□□□□ 0.39
CNOT4-204ENST00000414802 NCAPD2Q15021 1401 aa17.51■□□□□ 0.39
CNOT4-204ENST00000414802 UNC5CLQ8IV45 518 aa17.51■□□□□ 0.39
CNOT4-204ENST00000414802 GLI3P10071 1580 aa17.5■□□□□ 0.39
CNOT4-204ENST00000414802 SULT6B1Q6IMI4 303 aa17.5■□□□□ 0.39
CNOT4-204ENST00000414802 USP35Q9P2H5 1018 aa17.49■□□□□ 0.39
CNOT4-204ENST00000414802 ADAMTS8Q9UP79 889 aa17.49■□□□□ 0.39
CNOT4-204ENST00000414802 SHANK3Q9BYB0 1731 aa17.49■□□□□ 0.39
CNOT4-204ENST00000414802 CCDC9Q9Y3X0 531 aaKnown RBP17.48■□□□□ 0.39
CNOT4-204ENST00000414802 MEGF6O75095 1541 aa17.48■□□□□ 0.39
CNOT4-204ENST00000414802 PKD1L3Q7Z443 1732 aa17.48■□□□□ 0.39
CNOT4-204ENST00000414802 KDRP35968 1356 aa17.48■□□□□ 0.39
CNOT4-204ENST00000414802 ATRNO75882 1429 aa17.48■□□□□ 0.39
CNOT4-204ENST00000414802 CCDC146Q8IYE0 955 aa17.47■□□□□ 0.39
CNOT4-204ENST00000414802 CARD10Q9BWT7 1032 aa17.47■□□□□ 0.39
CNOT4-204ENST00000414802 RSPH6AQ9H0K4 717 aa17.46■□□□□ 0.39
CNOT4-204ENST00000414802 SPATA31A1Q5TZJ5 1347 aa17.45■□□□□ 0.38
CNOT4-204ENST00000414802 SPATA31A5Q5VU36 1347 aa17.45■□□□□ 0.38
CNOT4-204ENST00000414802 SPATA31A7Q8IWB4 1347 aa17.45■□□□□ 0.38
CNOT4-204ENST00000414802 SENP3-EIF4A1A0A087X0R7 540 aa17.45■□□□□ 0.38
CNOT4-204ENST00000414802 PRKAR2BP31323 418 aa17.45■□□□□ 0.38
CNOT4-204ENST00000414802 VPS72Q15906 364 aa17.45■□□□□ 0.38
CNOT4-204ENST00000414802 LRRC37A3O60309 1634 aa17.45■□□□□ 0.38
CNOT4-204ENST00000414802 KAT6BQ8WYB5 2073 aa17.44■□□□□ 0.38
CNOT4-204ENST00000414802 BRWD3Q6RI45 1802 aa17.43■□□□□ 0.38
CNOT4-204ENST00000414802 THSD7AQ9UPZ6 1657 aa17.43■□□□□ 0.38
CNOT4-204ENST00000414802 DISP2A7MBM2 1401 aa17.43■□□□□ 0.38
CNOT4-204ENST00000414802 FCHSD2O94868 740 aa17.42■□□□□ 0.38
CNOT4-204ENST00000414802 TCP11L2Q8N4U5 519 aa17.42■□□□□ 0.38
CNOT4-204ENST00000414802 TRPC5Q9UL62 973 aaPredicted RBP17.42■□□□□ 0.38
CNOT4-204ENST00000414802 RAPGEF4Q8WZA2 1011 aa17.41■□□□□ 0.38
CNOT4-204ENST00000414802 PLEKHF1Q96S99 279 aa17.41■□□□□ 0.38
CNOT4-204ENST00000414802 QTRT2Q9H974 415 aaKnown RBP17.41■□□□□ 0.38
CNOT4-204ENST00000414802 OVOS2A0A0G2JMS6 1433 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms