RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 NME9Q86XW9 330 aa21.94■■□□□ 1.1
MCF2L-211ENST00000413354 THRAP3Q9Y2W1 955 aaKnown RBP21.94■■□□□ 1.1
MCF2L-211ENST00000413354 CRB1P82279 1406 aa21.94■■□□□ 1.1
MCF2L-211ENST00000413354 TCP11L2Q8N4U5 519 aa21.93■■□□□ 1.1
MCF2L-211ENST00000413354 SOX12O15370 315 aa21.92■■□□□ 1.1
MCF2L-211ENST00000413354 USP35Q9P2H5 1018 aa21.92■■□□□ 1.1
MCF2L-211ENST00000413354 OVOS2A0A0J9YW53 1432 aa21.91■■□□□ 1.1
MCF2L-211ENST00000413354 OVOS2Q6IE36 1432 aa21.91■■□□□ 1.1
MCF2L-211ENST00000413354 WNK3Q9BYP7 1800 aa21.91■■□□□ 1.1
MCF2L-211ENST00000413354 PARP4Q9UKK3 1724 aaKnown RBP21.91■■□□□ 1.1
MCF2L-211ENST00000413354 RGPD1P0DJD0 1748 aa21.9■■□□□ 1.1
MCF2L-211ENST00000413354 SF3B2Q13435 895 aaKnown RBP21.9■■□□□ 1.1
MCF2L-211ENST00000413354 MYOM1P52179 1685 aa21.9■■□□□ 1.1
MCF2L-211ENST00000413354 ZRANB1Q9UGI0 708 aa21.89■■□□□ 1.09
MCF2L-211ENST00000413354 WDR17Q8IZU2 1322 aa21.88■■□□□ 1.09
MCF2L-211ENST00000413354 KIF20BQ96Q89 1820 aa21.87■■□□□ 1.09
MCF2L-211ENST00000413354 TOM1L2Q6ZVM7 507 aa21.87■■□□□ 1.09
MCF2L-211ENST00000413354 EIF4G2P78344 907 aaKnown RBP eCLIP21.86■■□□□ 1.09
MCF2L-211ENST00000413354 AXIN2Q9Y2T1 843 aa21.86■■□□□ 1.09
MCF2L-211ENST00000413354 COG3Q96JB2 828 aa21.85■■□□□ 1.09
MCF2L-211ENST00000413354 CSB-PGBD3P0DP91 1061 aa21.84■■□□□ 1.09
MCF2L-211ENST00000413354 PDE3BQ13370 1112 aa21.84■■□□□ 1.09
MCF2L-211ENST00000413354 LRRC37A3O60309 1634 aa21.83■■□□□ 1.08
MCF2L-211ENST00000413354 FAM196AQ6ZSG2 479 aa21.82■■□□□ 1.08
MCF2L-211ENST00000413354 TNS1Q9HBL0 1735 aaKnown RBP21.82■■□□□ 1.08
MCF2L-211ENST00000413354 FAM208AQ9UK61 1670 aaKnown RBP21.82■■□□□ 1.08
MCF2L-211ENST00000413354 CDCA7Q9BWT1 371 aaPredicted RBP21.81■■□□□ 1.08
MCF2L-211ENST00000413354 CARD10Q9BWT7 1032 aa21.81■■□□□ 1.08
MCF2L-211ENST00000413354 CCDC7Q96M83 1385 aa21.81■■□□□ 1.08
MCF2L-211ENST00000413354 BAG6P46379 1132 aa21.8■■□□□ 1.08
MCF2L-211ENST00000413354 ERBB3P21860 1342 aa21.8■■□□□ 1.08
MCF2L-211ENST00000413354 C11orf95C9JLR9 678 aaPredicted RBP21.79■■□□□ 1.08
MCF2L-211ENST00000413354 HSPA5P11021 654 aaKnown RBP21.78■■□□□ 1.08
MCF2L-211ENST00000413354 FAM182BQ5T319 152 aa21.78■■□□□ 1.08
MCF2L-211ENST00000413354 NSD3Q9BZ95 1437 aa21.77■■□□□ 1.08
MCF2L-211ENST00000413354 DISP2A7MBM2 1401 aa21.76■■□□□ 1.07
MCF2L-211ENST00000413354 DDB1Q16531 1140 aa21.76■■□□□ 1.07
MCF2L-211ENST00000413354 DEFB132Q7Z7B7 95 aa21.76■■□□□ 1.07
MCF2L-211ENST00000413354 OVOS2A0A0G2JMS6 1433 aa21.75■■□□□ 1.07
MCF2L-211ENST00000413354 FYB1O15117 783 aa21.75■■□□□ 1.07
MCF2L-211ENST00000413354 IP6K1Q92551 441 aa21.75■■□□□ 1.07
MCF2L-211ENST00000413354 PEAK1Q9H792 1746 aa21.75■■□□□ 1.07
MCF2L-211ENST00000413354 RTL1A6NKG5 1358 aa21.74■■□□□ 1.07
MCF2L-211ENST00000413354 ANKRD24Q8TF21 1146 aa21.74■■□□□ 1.07
MCF2L-211ENST00000413354 GGNBP2Q9H3C7 697 aa21.74■■□□□ 1.07
MCF2L-211ENST00000413354 POLR3GLQ9BT43 218 aa21.73■■□□□ 1.07
MCF2L-211ENST00000413354 MAP3K19Q56UN5 1328 aa21.73■■□□□ 1.07
MCF2L-211ENST00000413354 SBF2Q86WG5 1849 aa21.73■■□□□ 1.07
MCF2L-211ENST00000413354 AMPHP49418 695 aa21.72■■□□□ 1.07
MCF2L-211ENST00000413354 NLRP2Q9NX02 1062 aa21.72■■□□□ 1.07
MCF2L-211ENST00000413354 TRIM37O94972 964 aa21.71■■□□□ 1.07
MCF2L-211ENST00000413354 ANKRD26Q9UPS8 1709 aa21.71■■□□□ 1.07
MCF2L-211ENST00000413354 TNS2Q63HR2 1409 aa21.71■■□□□ 1.07
MCF2L-211ENST00000413354 CARD14Q9BXL6 1004 aa21.7■■□□□ 1.06
MCF2L-211ENST00000413354 CGNL1Q0VF96 1302 aa21.7■■□□□ 1.06
MCF2L-211ENST00000413354 HOXC9P31274 260 aa21.69■■□□□ 1.06
MCF2L-211ENST00000413354 KIF24Q5T7B8 1368 aa21.68■■□□□ 1.06
MCF2L-211ENST00000413354 PARD3Q8TEW0 1356 aa21.68■■□□□ 1.06
MCF2L-211ENST00000413354 BCL9O00512 1426 aa21.68■■□□□ 1.06
MCF2L-211ENST00000413354 SMG6Q86US8 1419 aaKnown RBP21.67■■□□□ 1.06
MCF2L-211ENST00000413354 EXOC5O00471 708 aa21.67■■□□□ 1.06
MCF2L-211ENST00000413354 IL2RBP14784 551 aa21.66■■□□□ 1.06
MCF2L-211ENST00000413354 EN1Q05925 392 aaPredicted RBP21.66■■□□□ 1.06
MCF2L-211ENST00000413354 RRS1Q15050 365 aaKnown RBP21.66■■□□□ 1.06
MCF2L-211ENST00000413354 RGPD3A6NKT7 1758 aaPredicted RBP21.66■■□□□ 1.06
MCF2L-211ENST00000413354 RGPD2P0DJD1 1756 aa21.66■■□□□ 1.06
MCF2L-211ENST00000413354 RGPD4Q7Z3J3 1758 aa21.66■■□□□ 1.06
MCF2L-211ENST00000413354 APBA3O96018 575 aa21.65■■□□□ 1.06
MCF2L-211ENST00000413354 LTV1Q96GA3 475 aaPredicted RBP21.65■■□□□ 1.06
MCF2L-211ENST00000413354 RREB1Q92766 1687 aa21.65■■□□□ 1.06
MCF2L-211ENST00000413354 MAP2P11137 1827 aaKnown RBP21.64■■□□□ 1.06
MCF2L-211ENST00000413354 FLT4P35916 1363 aa21.64■■□□□ 1.06
MCF2L-211ENST00000413354 FBLN1P23142 703 aa21.64■■□□□ 1.05
MCF2L-211ENST00000413354 MARCH10Q8NA82 808 aaPredicted RBP21.63■■□□□ 1.05
MCF2L-211ENST00000413354 NSD2O96028 1365 aa21.61■■□□□ 1.05
MCF2L-211ENST00000413354 INSRP06213 1382 aa21.61■■□□□ 1.05
MCF2L-211ENST00000413354 KAT6BQ8WYB5 2073 aa21.6■■□□□ 1.05
MCF2L-211ENST00000413354 EZH2Q15910 746 aaKnown RBP21.6■■□□□ 1.05
MCF2L-211ENST00000413354 CAMKK2Q96RR4 588 aa21.6■■□□□ 1.05
MCF2L-211ENST00000413354 NUP188Q5SRE5 1749 aa21.6■■□□□ 1.05
MCF2L-211ENST00000413354 BCL11BQ9C0K0 894 aaPredicted RBP21.59■■□□□ 1.05
MCF2L-211ENST00000413354 PANK3Q9H999 370 aa21.59■■□□□ 1.05
MCF2L-211ENST00000413354 NHSQ6T4R5 1651 aa21.59■■□□□ 1.05
MCF2L-211ENST00000413354 HSP90AB2PQ58FF8 381 aa21.55■■□□□ 1.04
MCF2L-211ENST00000413354 EMILIN1Q9Y6C2 1016 aa21.55■■□□□ 1.04
MCF2L-211ENST00000413354 SHANK3Q9BYB0 1731 aa21.55■■□□□ 1.04
MCF2L-211ENST00000413354 KIF7Q2M1P5 1343 aa21.55■■□□□ 1.04
MCF2L-211ENST00000413354 PLSCR1O15162 318 aa21.53■■□□□ 1.04
MCF2L-211ENST00000413354 KNSTRNQ9Y448 316 aa21.53■■□□□ 1.04
MCF2L-211ENST00000413354 MEGF6O75095 1541 aa21.53■■□□□ 1.04
MCF2L-211ENST00000413354 PPM1GO15355 546 aaPredicted RBP21.52■■□□□ 1.04
MCF2L-211ENST00000413354 NBPF6Q5VWK0 638 aa21.52■■□□□ 1.04
MCF2L-211ENST00000413354 NBPF4Q96M43 638 aa21.52■■□□□ 1.04
MCF2L-211ENST00000413354 RAPGEF4Q8WZA2 1011 aa21.51■■□□□ 1.03
MCF2L-211ENST00000413354 WASHC2AQ641Q2 1341 aa21.51■■□□□ 1.03
MCF2L-211ENST00000413354 LRP5O75197 1615 aa21.51■■□□□ 1.03
MCF2L-211ENST00000413354 BTAF1O14981 1849 aa21.5■■□□□ 1.03
MCF2L-211ENST00000413354 NBPF14Q5TI25 921 aa21.5■■□□□ 1.03
MCF2L-211ENST00000413354 PSDA5PKW4 1024 aaPredicted RBP21.49■■□□□ 1.03
MCF2L-211ENST00000413354 ZCRB1Q8TBF4 217 aaKnown RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms