RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 LMO7Q8WWI1 1683 aa27.03■■□□□ 1.92
PTPA-208ENST00000411917 PPM1GO15355 546 aaPredicted RBP27.02■■□□□ 1.92
PTPA-208ENST00000411917 HSP90AB2PQ58FF8 381 aa27.02■■□□□ 1.92
PTPA-208ENST00000411917 FBXO41Q8TF61 875 aa27.02■■□□□ 1.92
PTPA-208ENST00000411917 HAP1P54257 671 aaPredicted RBP27.01■■□□□ 1.91
PTPA-208ENST00000411917 WDR43Q15061 677 aaKnown RBP eCLIP27.01■■□□□ 1.91
PTPA-208ENST00000411917 ZC3H6P61129 1189 aaKnown RBP27■■□□□ 1.91
PTPA-208ENST00000411917 EIF4A2Q14240 407 aaKnown RBP27■■□□□ 1.91
PTPA-208ENST00000411917 COL14A1Q05707 1796 aaKnown RBP26.99■■□□□ 1.91
PTPA-208ENST00000411917 PRDM11Q9NQV5 511 aa26.99■■□□□ 1.91
PTPA-208ENST00000411917 RGPD1P0DJD0 1748 aa26.99■■□□□ 1.91
PTPA-208ENST00000411917 NCAPD2Q15021 1401 aa26.99■■□□□ 1.91
PTPA-208ENST00000411917 PLEKHG2Q9H7P9 1386 aa26.97■■□□□ 1.91
PTPA-208ENST00000411917 ERBB3P21860 1342 aa26.97■■□□□ 1.91
PTPA-208ENST00000411917 IGSF1Q8N6C5 1336 aa26.96■■□□□ 1.91
PTPA-208ENST00000411917 FAM208AQ9UK61 1670 aaKnown RBP26.96■■□□□ 1.91
PTPA-208ENST00000411917 PNNQ9H307 717 aaKnown RBP26.96■■□□□ 1.91
PTPA-208ENST00000411917 KDRP35968 1356 aa26.96■■□□□ 1.91
PTPA-208ENST00000411917 CAMTA1Q9Y6Y1 1673 aa26.95■■□□□ 1.91
PTPA-208ENST00000411917 FCHSD2O94868 740 aa26.94■■□□□ 1.9
PTPA-208ENST00000411917 ADAMTS8Q9UP79 889 aa26.94■■□□□ 1.9
PTPA-208ENST00000411917 AXIN2Q9Y2T1 843 aa26.94■■□□□ 1.9
PTPA-208ENST00000411917 COL5A2P05997 1499 aaPredicted RBP26.93■■□□□ 1.9
PTPA-208ENST00000411917 FAM83GA6ND36 823 aa26.92■■□□□ 1.9
PTPA-208ENST00000411917 NCBP3Q53F19 620 aaKnown RBP26.92■■□□□ 1.9
PTPA-208ENST00000411917 FAM9BQ8IZU0 186 aa26.91■■□□□ 1.9
PTPA-208ENST00000411917 ANKRD24Q8TF21 1146 aa26.91■■□□□ 1.9
PTPA-208ENST00000411917 U2AF1L5P0DN76 240 aaPredicted RBP26.9■■□□□ 1.9
PTPA-208ENST00000411917 U2AF1Q01081 240 aaKnown RBP eCLIP26.9■■□□□ 1.9
PTPA-208ENST00000411917 SLIT2O94813 1529 aa26.9■■□□□ 1.9
PTPA-208ENST00000411917 NGEFQ8N5V2 710 aa26.89■■□□□ 1.9
PTPA-208ENST00000411917 NWD2Q9ULI1 1742 aa26.88■■□□□ 1.89
PTPA-208ENST00000411917 CHRNA2Q15822 529 aa26.88■■□□□ 1.89
PTPA-208ENST00000411917 EYA1Q99502 592 aa26.88■■□□□ 1.89
PTPA-208ENST00000411917 WDR17Q8IZU2 1322 aa26.88■■□□□ 1.89
PTPA-208ENST00000411917 U2SURPO15042 1029 aaKnown RBP26.87■■□□□ 1.89
PTPA-208ENST00000411917 PLEKHG5O94827 1062 aa26.86■■□□□ 1.89
PTPA-208ENST00000411917 RSPH6AQ9H0K4 717 aa26.86■■□□□ 1.89
PTPA-208ENST00000411917 LRP6O75581 1613 aa26.86■■□□□ 1.89
PTPA-208ENST00000411917 RUNDC1Q96C34 613 aa26.85■■□□□ 1.89
PTPA-208ENST00000411917 PLEKHF1Q96S99 279 aa26.85■■□□□ 1.89
PTPA-208ENST00000411917 ZBTB7CA1YPR0 619 aa26.84■■□□□ 1.89
PTPA-208ENST00000411917 FNBP4Q8N3X1 1017 aaPredicted RBP26.83■■□□□ 1.89
PTPA-208ENST00000411917 PLCH1Q4KWH8 1693 aa26.82■■□□□ 1.88
PTPA-208ENST00000411917 RGPD5Q99666 1765 aa26.82■■□□□ 1.88
PTPA-208ENST00000411917 NBPF6Q5VWK0 638 aa26.82■■□□□ 1.88
PTPA-208ENST00000411917 NBPF4Q96M43 638 aa26.82■■□□□ 1.88
PTPA-208ENST00000411917 CARD10Q9BWT7 1032 aa26.81■■□□□ 1.88
PTPA-208ENST00000411917 BTG4Q9NY30 223 aa26.81■■□□□ 1.88
PTPA-208ENST00000411917 NRAPQ86VF7 1730 aa26.81■■□□□ 1.88
PTPA-208ENST00000411917 CRB1P82279 1406 aa26.81■■□□□ 1.88
PTPA-208ENST00000411917 NUTM2BA6NNL0 878 aaPredicted RBP26.8■■□□□ 1.88
PTPA-208ENST00000411917 NUTM2EB1AL46 878 aaPredicted RBP26.8■■□□□ 1.88
PTPA-208ENST00000411917 SULT6B1Q6IMI4 303 aa26.8■■□□□ 1.88
PTPA-208ENST00000411917 NUTM2AQ8IVF1 878 aaPredicted RBP26.8■■□□□ 1.88
PTPA-208ENST00000411917 ADAMTS2O95450 1211 aa26.79■■□□□ 1.88
PTPA-208ENST00000411917 LTV1Q96GA3 475 aaPredicted RBP26.78■■□□□ 1.88
PTPA-208ENST00000411917 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.78■■□□□ 1.88
PTPA-208ENST00000411917 NEFMP07197 916 aa26.77■■□□□ 1.88
PTPA-208ENST00000411917 CSB-PGBD3P0DP91 1061 aa26.76■■□□□ 1.87
PTPA-208ENST00000411917 PRKAR2BP31323 418 aa26.76■■□□□ 1.87
PTPA-208ENST00000411917 MAPK8IP3Q9UPT6 1336 aa26.75■■□□□ 1.87
PTPA-208ENST00000411917 EVA1CP58658 441 aa26.75■■□□□ 1.87
PTPA-208ENST00000411917 BCL9LQ86UU0 1499 aa26.74■■□□□ 1.87
PTPA-208ENST00000411917 HMOX1P09601 288 aa26.74■■□□□ 1.87
PTPA-208ENST00000411917 AEBP1Q8IUX7 1158 aa26.74■■□□□ 1.87
PTPA-208ENST00000411917 UNC5CLQ8IV45 518 aa26.74■■□□□ 1.87
PTPA-208ENST00000411917 NLRP2Q9NX02 1062 aa26.74■■□□□ 1.87
PTPA-208ENST00000411917 CCDC27Q2M243 656 aa26.73■■□□□ 1.87
PTPA-208ENST00000411917 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.73■■□□□ 1.87
PTPA-208ENST00000411917 THRAP3Q9Y2W1 955 aaKnown RBP26.73■■□□□ 1.87
PTPA-208ENST00000411917 TOM1L2Q6ZVM7 507 aa26.72■■□□□ 1.87
PTPA-208ENST00000411917 ZBED9Q6R2W3 1325 aa26.71■■□□□ 1.87
PTPA-208ENST00000411917 LARP1Q6PKG0 1096 aaKnown RBP26.71■■□□□ 1.87
PTPA-208ENST00000411917 NGLY1Q96IV0 654 aa26.71■■□□□ 1.87
PTPA-208ENST00000411917 AMOTQ4VCS5 1084 aa26.7■■□□□ 1.86
PTPA-208ENST00000411917 TCP11L2Q8N4U5 519 aa26.7■■□□□ 1.86
PTPA-208ENST00000411917 C8orf37Q96NL8 207 aa26.7■■□□□ 1.86
PTPA-208ENST00000411917 PHF23Q9BUL5 403 aaPredicted RBP26.7■■□□□ 1.86
PTPA-208ENST00000411917 RGPD2P0DJD1 1756 aa26.7■■□□□ 1.86
PTPA-208ENST00000411917 VPS72Q15906 364 aa26.69■■□□□ 1.86
PTPA-208ENST00000411917 CCDC146Q8IYE0 955 aa26.69■■□□□ 1.86
PTPA-208ENST00000411917 OVOS2A0A0G2JMS6 1433 aa26.68■■□□□ 1.86
PTPA-208ENST00000411917 APAF1O14727 1248 aa26.68■■□□□ 1.86
PTPA-208ENST00000411917 HNRNPUQ00839 825 aaKnown RBP eCLIP26.68■■□□□ 1.86
PTPA-208ENST00000411917 MEX3CQ5U5Q3 659 aaKnown RBP26.68■■□□□ 1.86
PTPA-208ENST00000411917 GAS2L2Q8NHY3 880 aa26.68■■□□□ 1.86
PTPA-208ENST00000411917 CDCA7Q9BWT1 371 aaPredicted RBP26.68■■□□□ 1.86
PTPA-208ENST00000411917 STRN4Q9NRL3 753 aa26.68■■□□□ 1.86
PTPA-208ENST00000411917 SPATA31A5Q5VU36 1347 aa26.67■■□□□ 1.86
PTPA-208ENST00000411917 SPATA31A7Q8IWB4 1347 aa26.67■■□□□ 1.86
PTPA-208ENST00000411917 DISP2A7MBM2 1401 aa26.67■■□□□ 1.86
PTPA-208ENST00000411917 TMPOP42166 694 aaKnown RBP26.67■■□□□ 1.86
PTPA-208ENST00000411917 NFE2L2Q16236 605 aa26.67■■□□□ 1.86
PTPA-208ENST00000411917 RAPGEF4Q8WZA2 1011 aa26.67■■□□□ 1.86
PTPA-208ENST00000411917 SPATA31A1Q5TZJ5 1347 aa26.66■■□□□ 1.86
PTPA-208ENST00000411917 PHACTR3Q96KR7 559 aa26.66■■□□□ 1.86
PTPA-208ENST00000411917 BARGINQ6ZT62 677 aa26.65■■□□□ 1.86
PTPA-208ENST00000411917 USHBP1Q8N6Y0 703 aa26.65■■□□□ 1.86
PTPA-208ENST00000411917 PARP4Q9UKK3 1724 aaKnown RBP26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms