RNA–Protein interactions for RNA: ENST00000411850.5

TOM1-204, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TOM1, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-204ENST00000411850 PHACTR3Q96KR7 559 aa21.31■■□□□ 1
TOM1-204ENST00000411850 CPS1P31327 1500 aa21.31■■□□□ 1
TOM1-204ENST00000411850 ADAMTS13Q76LX8 1427 aa21.3■■□□□ 1
TOM1-204ENST00000411850 WASLO00401 505 aaPredicted RBP21.3■■□□□ 1
TOM1-204ENST00000411850 FBLN1P23142 703 aa21.3■■□□□ 1
TOM1-204ENST00000411850 IL13P35225 146 aa21.3■■□□□ 1
TOM1-204ENST00000411850 PIK3R4Q99570 1358 aa21.3■■□□□ 1
TOM1-204ENST00000411850 PLEKHG1Q9ULL1 1385 aa21.3■■□□□ 1
TOM1-204ENST00000411850 CHMP4BQ9H444 224 aaKnown RBP21.29■■□□□ 1
TOM1-204ENST00000411850 IFT57Q9NWB7 429 aa21.29■■□□□ 1
TOM1-204ENST00000411850 PTCH1Q13635 1447 aa21.29■■□□□ 1
TOM1-204ENST00000411850 VAMP4O75379 141 aa21.29■■□□□ 1
TOM1-204ENST00000411850 ZNF853P0CG23 659 aa21.28■■□□□ 1
TOM1-204ENST00000411850 GNAI1P63096 354 aa21.28■■□□□ 1
TOM1-204ENST00000411850 HMOX1P09601 288 aa21.28■■□□□ 1
TOM1-204ENST00000411850 LTKP29376 864 aa21.28■■□□□ 1
TOM1-204ENST00000411850 MRPL50Q8N5N7 158 aaKnown RBP21.28■■□□□ 1
TOM1-204ENST00000411850 SLIT1O75093 1534 aa21.27■■□□□ 1
TOM1-204ENST00000411850 MFAP1P55081 439 aaKnown RBP21.27■■□□□ 1
TOM1-204ENST00000411850 BRPF3Q9ULD4 1205 aa21.27■■□□□ 1
TOM1-204ENST00000411850 EMILIN1Q9Y6C2 1016 aa21.27■■□□□ 1
TOM1-204ENST00000411850 ARHGAP23Q9P227 1491 aa21.27■■□□□ 1
TOM1-204ENST00000411850 TXNDC2Q86VQ3 553 aa21.26■□□□□ 0.99
TOM1-204ENST00000411850 ZBTB7BO15156 539 aaPredicted RBP21.26■□□□□ 0.99
TOM1-204ENST00000411850 NME9Q86XW9 330 aa21.25■□□□□ 0.99
TOM1-204ENST00000411850 MON2Q7Z3U7 1717 aa21.25■□□□□ 0.99
TOM1-204ENST00000411850 CHD1LQ86WJ1 897 aa21.25■□□□□ 0.99
TOM1-204ENST00000411850 LMOD3Q0VAK6 560 aa21.24■□□□□ 0.99
TOM1-204ENST00000411850 THUMPD2Q9BTF0 503 aaKnown RBP21.24■□□□□ 0.99
TOM1-204ENST00000411850 TSPYL6Q8N831 410 aa21.23■□□□□ 0.99
TOM1-204ENST00000411850 GCC1Q96CN9 775 aa21.23■□□□□ 0.99
TOM1-204ENST00000411850 NUDT16Q96DE0 195 aaKnown RBP21.23■□□□□ 0.99
TOM1-204ENST00000411850 MBIPQ9NS73 344 aa21.23■□□□□ 0.99
TOM1-204ENST00000411850 ABCC4O15439 1325 aa21.22■□□□□ 0.99
TOM1-204ENST00000411850 COG3Q96JB2 828 aa21.22■□□□□ 0.99
TOM1-204ENST00000411850 LNPKQ9C0E8 428 aa21.22■□□□□ 0.99
TOM1-204ENST00000411850 CCDC61Q9Y6R9 512 aa21.22■□□□□ 0.99
TOM1-204ENST00000411850 RBM25P49756 843 aaKnown RBP21.21■□□□□ 0.99
TOM1-204ENST00000411850 CFAP44Q96MT7 982 aa21.21■□□□□ 0.99
TOM1-204ENST00000411850 EID1Q9Y6B2 187 aa21.21■□□□□ 0.99
TOM1-204ENST00000411850 ZRANB1Q9UGI0 708 aa21.21■□□□□ 0.99
TOM1-204ENST00000411850 AKAP12Q02952 1782 aa21.2■□□□□ 0.98
TOM1-204ENST00000411850 ROBO2Q9HCK4 1378 aa21.2■□□□□ 0.98
TOM1-204ENST00000411850 BMP2KLQ5H9B9 411 aa21.2■□□□□ 0.98
TOM1-204ENST00000411850 DLG5Q8TDM6 1919 aa21.19■□□□□ 0.98
TOM1-204ENST00000411850 CHMP5Q9NZZ3 219 aa21.19■□□□□ 0.98
TOM1-204ENST00000411850 TWISTNBQ3B726 338 aaPredicted RBP21.18■□□□□ 0.98
TOM1-204ENST00000411850 THEMISQ8N1K5 641 aaPredicted RBP21.18■□□□□ 0.98
TOM1-204ENST00000411850 ZNF692Q9BU19 519 aaPredicted RBP21.18■□□□□ 0.98
TOM1-204ENST00000411850 RTN4Q9NQC3 1192 aaKnown RBP21.17■□□□□ 0.98
TOM1-204ENST00000411850 ITSN1Q15811 1721 aa21.17■□□□□ 0.98
TOM1-204ENST00000411850 KIF24Q5T7B8 1368 aa21.17■□□□□ 0.98
TOM1-204ENST00000411850 HSCBQ8IWL3 235 aa21.16■□□□□ 0.98
TOM1-204ENST00000411850 API5Q9BZZ5 524 aaKnown RBP21.16■□□□□ 0.98
TOM1-204ENST00000411850 NRKQ7Z2Y5 1582 aa21.16■□□□□ 0.98
TOM1-204ENST00000411850 PTPRUQ92729 1446 aa21.16■□□□□ 0.98
TOM1-204ENST00000411850 PLPPR3Q6T4P5 718 aa21.16■□□□□ 0.98
TOM1-204ENST00000411850 SNX21Q969T3 373 aa21.16■□□□□ 0.98
TOM1-204ENST00000411850 RRS1Q15050 365 aaKnown RBP21.15■□□□□ 0.98
TOM1-204ENST00000411850 ANKRD45Q5TZF3 282 aa21.15■□□□□ 0.98
TOM1-204ENST00000411850 C8orf58Q8NAV2 365 aa21.15■□□□□ 0.98
TOM1-204ENST00000411850 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.15■□□□□ 0.98
TOM1-204ENST00000411850 NCOA3Q9Y6Q9 1424 aa21.15■□□□□ 0.98
TOM1-204ENST00000411850 MCM4P33991 863 aa21.15■□□□□ 0.98
TOM1-204ENST00000411850 SIRT2Q8IXJ6 389 aa21.15■□□□□ 0.98
TOM1-204ENST00000411850 TBX22Q9Y458 520 aa21.15■□□□□ 0.98
TOM1-204ENST00000411850 ELL2O00472 640 aaPredicted RBP21.14■□□□□ 0.97
TOM1-204ENST00000411850 NCKAP5LQ9HCH0 1330 aa21.14■□□□□ 0.97
TOM1-204ENST00000411850 DIP2AQ14689 1571 aa21.14■□□□□ 0.97
TOM1-204ENST00000411850 SPRYD3Q8NCJ5 442 aa21.14■□□□□ 0.97
TOM1-204ENST00000411850 SLC26A8Q96RN1 970 aa21.13■□□□□ 0.97
TOM1-204ENST00000411850 C1orf115Q9H7X2 142 aa21.13■□□□□ 0.97
TOM1-204ENST00000411850 RIMS1Q86UR5 1692 aaKnown RBP21.12■□□□□ 0.97
TOM1-204ENST00000411850 PRR36Q9H6K5 1346 aa21.12■□□□□ 0.97
TOM1-204ENST00000411850 CEP170BQ9Y4F5 1589 aaPredicted RBP21.12■□□□□ 0.97
TOM1-204ENST00000411850 FAM83GA6ND36 823 aa21.11■□□□□ 0.97
TOM1-204ENST00000411850 DDIT3P35638 169 aa21.11■□□□□ 0.97
TOM1-204ENST00000411850 L1TD1Q5T7N2 865 aaKnown RBP21.11■□□□□ 0.97
TOM1-204ENST00000411850 HAP1P54257 671 aaPredicted RBP21.08■□□□□ 0.97
TOM1-204ENST00000411850 ADAMTSL3P82987 1691 aa21.08■□□□□ 0.96
TOM1-204ENST00000411850 TOPAZ1Q8N9V7 1692 aa21.08■□□□□ 0.96
TOM1-204ENST00000411850 AMOTL2Q9Y2J4 779 aa21.08■□□□□ 0.96
TOM1-204ENST00000411850 DCTN1Q14203 1278 aa21.07■□□□□ 0.96
TOM1-204ENST00000411850 EIF4A2Q14240 407 aaKnown RBP21.07■□□□□ 0.96
TOM1-204ENST00000411850 INTS3Q68E01 1043 aaKnown RBP21.07■□□□□ 0.96
TOM1-204ENST00000411850 TTC21BQ7Z4L5 1316 aa21.07■□□□□ 0.96
TOM1-204ENST00000411850 TBC1D9Q6ZT07 1266 aa21.07■□□□□ 0.96
TOM1-204ENST00000411850 KIF2CQ99661 725 aa21.07■□□□□ 0.96
TOM1-204ENST00000411850 OVOS2A0A0J9YW53 1432 aa21.06■□□□□ 0.96
TOM1-204ENST00000411850 OVOS2Q6IE36 1432 aa21.06■□□□□ 0.96
TOM1-204ENST00000411850 DNAJC5Q9H3Z4 198 aa21.05■□□□□ 0.96
TOM1-204ENST00000411850 CIZ1Q9ULV3 898 aaPredicted RBP21.05■□□□□ 0.96
TOM1-204ENST00000411850 KIAA0232Q92628 1395 aa21.05■□□□□ 0.96
TOM1-204ENST00000411850 XRN1Q8IZH2 1706 aaKnown RBP21.05■□□□□ 0.96
TOM1-204ENST00000411850 PLEKHG3A1L390 1219 aa21.04■□□□□ 0.96
TOM1-204ENST00000411850 CHL1O00533 1208 aa21.04■□□□□ 0.96
TOM1-204ENST00000411850 SULT6B1Q6IMI4 303 aa21.04■□□□□ 0.96
TOM1-204ENST00000411850 AEBP1Q8IUX7 1158 aa21.04■□□□□ 0.96
TOM1-204ENST00000411850 DCTPP1Q9H773 170 aa21.04■□□□□ 0.96
TOM1-204ENST00000411850 ZNF142P52746 1687 aaPredicted RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms