RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 FMNL1O95466 1100 aaPredicted RBP4.84□□□□□ -1.63
RGPD1-202ENST00000409776 DESP17661 470 aa4.84□□□□□ -1.63
RGPD1-202ENST00000409776 RPAP2Q8IXW5 612 aaPredicted RBP4.84□□□□□ -1.63
RGPD1-202ENST00000409776 GOLGA8QA0A0J9YX86 632 aa4.84□□□□□ -1.63
RGPD1-202ENST00000409776 GOLGA8OA6NCC3 632 aa4.84□□□□□ -1.63
RGPD1-202ENST00000409776 GOLGA8NF8WBI6 632 aa4.84□□□□□ -1.63
RGPD1-202ENST00000409776 NDC80O14777 642 aa4.84□□□□□ -1.63
RGPD1-202ENST00000409776 SLC4A1P02730 911 aa4.84□□□□□ -1.63
RGPD1-202ENST00000409776 KIF22Q14807 665 aa4.84□□□□□ -1.63
RGPD1-202ENST00000409776 TSC1Q92574 1164 aa4.84□□□□□ -1.63
RGPD1-202ENST00000409776 BCL2L13Q9BXK5 485 aa4.84□□□□□ -1.63
RGPD1-202ENST00000409776 RNF20Q5VTR2 975 aa4.84□□□□□ -1.64
RGPD1-202ENST00000409776 EFCC1Q9HA90 598 aa4.84□□□□□ -1.64
RGPD1-202ENST00000409776 DEUP1Q05D60 604 aa4.83□□□□□ -1.64
RGPD1-202ENST00000409776 GOLGA2Q08379 1002 aa4.83□□□□□ -1.64
RGPD1-202ENST00000409776 SLC4A8Q2Y0W8 1093 aa4.83□□□□□ -1.64
RGPD1-202ENST00000409776 NBPF8Q3BBV2 869 aa4.83□□□□□ -1.64
RGPD1-202ENST00000409776 TRIM60Q495X7 471 aa4.83□□□□□ -1.64
RGPD1-202ENST00000409776 NBPF11Q86T75 865 aa4.83□□□□□ -1.64
RGPD1-202ENST00000409776 TXLNBQ8N3L3 684 aa4.83□□□□□ -1.64
RGPD1-202ENST00000409776 BECN2A8MW95 431 aa4.83□□□□□ -1.64
RGPD1-202ENST00000409776 FLCNQ8NFG4 579 aa4.83□□□□□ -1.64
RGPD1-202ENST00000409776 TUBB1Q9H4B7 451 aa4.83□□□□□ -1.64
RGPD1-202ENST00000409776 XAB2Q9HCS7 855 aaKnown RBP4.83□□□□□ -1.64
RGPD1-202ENST00000409776 WBP4O75554 376 aaKnown RBP4.83□□□□□ -1.64
RGPD1-202ENST00000409776 ATP6V1AP38606 617 aa4.83□□□□□ -1.64
RGPD1-202ENST00000409776 RNF187Q5TA31 235 aaPredicted RBP4.83□□□□□ -1.64
RGPD1-202ENST00000409776 P3H3Q8IVL6 736 aa4.83□□□□□ -1.64
RGPD1-202ENST00000409776 MAK16Q9BXY0 300 aaKnown RBP4.83□□□□□ -1.64
RGPD1-202ENST00000409776 STMN4Q9H169 189 aaPredicted RBP4.83□□□□□ -1.64
RGPD1-202ENST00000409776 ZHX1Q9UKY1 873 aaPredicted RBP4.83□□□□□ -1.64
RGPD1-202ENST00000409776 CAPN9O14815 690 aa4.83□□□□□ -1.64
RGPD1-202ENST00000409776 MAFGO15525 162 aa4.83□□□□□ -1.64
RGPD1-202ENST00000409776 PPP1R12BO60237 982 aaPredicted RBP4.83□□□□□ -1.64
RGPD1-202ENST00000409776 MGEA5O60502 916 aa4.83□□□□□ -1.64
RGPD1-202ENST00000409776 TACC1O75410 805 aa4.83□□□□□ -1.64
RGPD1-202ENST00000409776 C6orf163Q5TEZ5 329 aa4.83□□□□□ -1.64
RGPD1-202ENST00000409776 CCDC181Q5TID7 509 aa4.83□□□□□ -1.64
RGPD1-202ENST00000409776 MPRIPQ6WCQ1 1025 aa4.83□□□□□ -1.64
RGPD1-202ENST00000409776 SMARCC2Q8TAQ2 1214 aa4.83□□□□□ -1.64
RGPD1-202ENST00000409776 ANKRD24Q8TF21 1146 aa4.83□□□□□ -1.64
RGPD1-202ENST00000409776 LUC7LQ9NQ29 371 aaKnown RBP4.83□□□□□ -1.64
RGPD1-202ENST00000409776 TOMM22Q9NS69 142 aa4.83□□□□□ -1.64
RGPD1-202ENST00000409776 SYF2O95926 243 aaKnown RBP4.83□□□□□ -1.64
RGPD1-202ENST00000409776 LUZP1Q86V48 1076 aa4.83□□□□□ -1.64
RGPD1-202ENST00000409776 DDX27Q96GQ7 796 aaKnown RBP4.83□□□□□ -1.64
RGPD1-202ENST00000409776 RMDN2Q96LZ7 410 aa4.83□□□□□ -1.64
RGPD1-202ENST00000409776 SPATS2LQ9NUQ6 558 aaKnown RBP4.83□□□□□ -1.64
RGPD1-202ENST00000409776 RNF216Q9NWF9 866 aaPredicted RBP4.83□□□□□ -1.64
RGPD1-202ENST00000409776 RAP1GDS1P52306 607 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 SPATS2Q86XZ4 545 aaKnown RBP4.82□□□□□ -1.64
RGPD1-202ENST00000409776 CCDC113Q9H0I3 377 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 CEP131Q9UPN4 1083 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 DYNC1I1O14576 645 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 CNGA1P29973 690 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 WHAMMP3Q1A5X7 153 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 GBP6Q6ZN66 633 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 DRC1Q96MC2 740 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 FRMD4BQ9Y2L6 1034 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 CCDC85CA6NKD9 419 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 RGS3P49796 1198 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 NAA25Q14CX7 972 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 MFSD4BQ5TF39 518 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 KDM4AO75164 1064 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 KIF5BP33176 963 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 MAP2K2P36507 400 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 NEK1Q96PY6 1258 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 ESF1Q9H501 851 aaKnown RBP4.82□□□□□ -1.64
RGPD1-202ENST00000409776 ARIH1Q9Y4X5 557 aaPredicted RBP4.82□□□□□ -1.64
RGPD1-202ENST00000409776 CD2APQ9Y5K6 639 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 PLIN1O60240 522 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 ERCC3P19447 782 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 CHMP4BP1P59074 171 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 SF3B2Q13435 895 aaKnown RBP4.82□□□□□ -1.64
RGPD1-202ENST00000409776 HDAC1Q13547 482 aaPredicted RBP4.82□□□□□ -1.64
RGPD1-202ENST00000409776 ARHGAP18Q8N392 663 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 MSANTD4Q8NCY6 345 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 CCDC110Q8TBZ0 833 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 SMARCC1Q92922 1105 aaPredicted RBP4.82□□□□□ -1.64
RGPD1-202ENST00000409776 DACT3Q96B18 629 aaPredicted RBP4.82□□□□□ -1.64
RGPD1-202ENST00000409776 GOPCQ9HD26 462 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 TCEAL9Q9UHQ7 104 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 CEP104O60308 925 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 TMEM132AQ24JP5 1023 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 CCDC65Q8IXS2 484 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 ARL10Q8N8L6 244 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 TMOD2Q9NZR1 351 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 SERPINA10Q9UK55 444 aa4.82□□□□□ -1.64
RGPD1-202ENST00000409776 CASQ1P31415 396 aa4.81□□□□□ -1.64
RGPD1-202ENST00000409776 RSRC1Q96IZ7 334 aaKnown RBP4.81□□□□□ -1.64
RGPD1-202ENST00000409776 RAI14Q9P0K7 980 aa4.81□□□□□ -1.64
RGPD1-202ENST00000409776 SUPT16HQ9Y5B9 1047 aaKnown RBP4.81□□□□□ -1.64
RGPD1-202ENST00000409776 TACC3Q9Y6A5 838 aa4.81□□□□□ -1.64
RGPD1-202ENST00000409776 KRT7P08729 469 aa4.81□□□□□ -1.64
RGPD1-202ENST00000409776 FAPQ12884 760 aa4.81□□□□□ -1.64
RGPD1-202ENST00000409776 PPFIBP1Q86W92 1011 aa4.81□□□□□ -1.64
RGPD1-202ENST00000409776 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.81□□□□□ -1.64
RGPD1-202ENST00000409776 MPP4Q96JB8 637 aa4.81□□□□□ -1.64
RGPD1-202ENST00000409776 MRPL46Q9H2W6 279 aaKnown RBP4.81□□□□□ -1.64
RGPD1-202ENST00000409776 NEBLO76041 1014 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms