RNA–Protein interactions for RNA: ENST00000407439.7

MRE11-204, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 2 BASIC

Gene MRE11, Length 2,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-204ENST00000407439 TTC21AQ8NDW8 1320 aa8.24□□□□□ -1.09
MRE11-204ENST00000407439 CALD1Q05682 793 aaKnown RBP8.24□□□□□ -1.09
MRE11-204ENST00000407439 FRAT1Q92837 279 aaPredicted RBP8.24□□□□□ -1.09
MRE11-204ENST00000407439 ZRANB1Q9UGI0 708 aa8.24□□□□□ -1.09
MRE11-204ENST00000407439 COG6Q9Y2V7 657 aa8.24□□□□□ -1.09
MRE11-204ENST00000407439 RIMS1Q86UR5 1692 aaKnown RBP8.24□□□□□ -1.09
MRE11-204ENST00000407439 DCAF8L1A6NGE4 600 aa8.23□□□□□ -1.09
MRE11-204ENST00000407439 TRHP20396 242 aaPredicted RBP8.23□□□□□ -1.09
MRE11-204ENST00000407439 ZNF142P52746 1687 aaPredicted RBP8.23□□□□□ -1.09
MRE11-204ENST00000407439 RLBP1P12271 317 aa8.23□□□□□ -1.09
MRE11-204ENST00000407439 EXOSC9Q06265 439 aaKnown RBP8.23□□□□□ -1.09
MRE11-204ENST00000407439 RRS1Q15050 365 aaKnown RBP8.23□□□□□ -1.09
MRE11-204ENST00000407439 ZKSCAN2Q63HK3 967 aa8.23□□□□□ -1.09
MRE11-204ENST00000407439 KIF16BQ96L93 1317 aa8.22□□□□□ -1.09
MRE11-204ENST00000407439 PHACTR3Q96KR7 559 aa8.22□□□□□ -1.09
MRE11-204ENST00000407439 BCL2L13Q9BXK5 485 aa8.22□□□□□ -1.09
MRE11-204ENST00000407439 HMOX1P09601 288 aa8.22□□□□□ -1.09
MRE11-204ENST00000407439 BRPF1P55201 1214 aaPredicted RBP8.22□□□□□ -1.09
MRE11-204ENST00000407439 LMOD3Q0VAK6 560 aa8.22□□□□□ -1.09
MRE11-204ENST00000407439 ALDH1L2Q3SY69 923 aa8.22□□□□□ -1.09
MRE11-204ENST00000407439 IPO9Q96P70 1041 aaKnown RBP8.22□□□□□ -1.09
MRE11-204ENST00000407439 SMC4Q9NTJ3 1288 aa8.22□□□□□ -1.09
MRE11-204ENST00000407439 MVPQ14764 893 aaKnown RBP8.21□□□□□ -1.09
MRE11-204ENST00000407439 SAMD1Q6SPF0 538 aaPredicted RBP8.21□□□□□ -1.09
MRE11-204ENST00000407439 PMFBP1Q8TBY8 1022 aa8.21□□□□□ -1.09
MRE11-204ENST00000407439 SSH1Q8WYL5 1049 aa8.21□□□□□ -1.09
MRE11-204ENST00000407439 FTSJ3Q8IY81 847 aaKnown RBP8.21□□□□□ -1.1
MRE11-204ENST00000407439 DZIP1LQ8IYY4 767 aaKnown RBP8.21□□□□□ -1.1
MRE11-204ENST00000407439 IFT57Q9NWB7 429 aa8.21□□□□□ -1.1
MRE11-204ENST00000407439 ZNF853P0CG23 659 aa8.2□□□□□ -1.1
MRE11-204ENST00000407439 TRIM27P14373 513 aa8.2□□□□□ -1.1
MRE11-204ENST00000407439 SKAP1Q86WV1 359 aa8.2□□□□□ -1.1
MRE11-204ENST00000407439 RGPD1P0DJD0 1748 aa8.2□□□□□ -1.1
MRE11-204ENST00000407439 IGHDP01880 384 aa8.2□□□□□ -1.1
MRE11-204ENST00000407439 KCNA6P17658 529 aa8.2□□□□□ -1.1
MRE11-204ENST00000407439 GNAI1P63096 354 aa8.2□□□□□ -1.1
MRE11-204ENST00000407439 ATF7IPQ6VMQ6 1270 aa8.2□□□□□ -1.1
MRE11-204ENST00000407439 NOP58Q9Y2X3 529 aaKnown RBP8.2□□□□□ -1.1
MRE11-204ENST00000407439 ADAMTSL3P82987 1691 aa8.2□□□□□ -1.1
MRE11-204ENST00000407439 PEAK1Q9H792 1746 aa8.19□□□□□ -1.1
MRE11-204ENST00000407439 NUTM2FA1L443 756 aa8.19□□□□□ -1.1
MRE11-204ENST00000407439 EIF4A2Q14240 407 aaKnown RBP8.19□□□□□ -1.1
MRE11-204ENST00000407439 FAM161AQ3B820 660 aa8.19□□□□□ -1.1
MRE11-204ENST00000407439 TNNQ9UQP3 1299 aa8.19□□□□□ -1.1
MRE11-204ENST00000407439 USP54Q70EL1 1684 aa8.19□□□□□ -1.1
MRE11-204ENST00000407439 FMN2Q9NZ56 1722 aa8.19□□□□□ -1.1
MRE11-204ENST00000407439 FLT4P35916 1363 aa8.19□□□□□ -1.1
MRE11-204ENST00000407439 KIF24Q5T7B8 1368 aa8.19□□□□□ -1.1
MRE11-204ENST00000407439 ERICH6Q7L0X2 663 aa8.19□□□□□ -1.1
MRE11-204ENST00000407439 CFAP44Q96MT7 982 aa8.19□□□□□ -1.1
MRE11-204ENST00000407439 DDX19BQ9UMR2 479 aa8.19□□□□□ -1.1
MRE11-204ENST00000407439 SETD1BQ9UPS6 1966 aaKnown RBP8.19□□□□□ -1.1
MRE11-204ENST00000407439 SBNO1A3KN83 1393 aa8.19□□□□□ -1.1
MRE11-204ENST00000407439 ARHGEF10O15013 1369 aa8.19□□□□□ -1.1
MRE11-204ENST00000407439 PIK3C2AO00443 1686 aa8.19□□□□□ -1.1
MRE11-204ENST00000407439 IPO8O15397 1037 aaKnown RBP8.18□□□□□ -1.1
MRE11-204ENST00000407439 C8orf34Q49A92 452 aa8.18□□□□□ -1.1
MRE11-204ENST00000407439 ANKLE2Q86XL3 938 aa8.18□□□□□ -1.1
MRE11-204ENST00000407439 PCDHB15Q9Y5E8 787 aa8.18□□□□□ -1.1
MRE11-204ENST00000407439 KDRP35968 1356 aa8.18□□□□□ -1.1
MRE11-204ENST00000407439 NGDNQ8NEJ9 315 aaKnown RBP8.18□□□□□ -1.1
MRE11-204ENST00000407439 U3KPZ7 1027 aaPredicted RBP8.17□□□□□ -1.1
MRE11-204ENST00000407439 DLG5Q8TDM6 1919 aa8.17□□□□□ -1.1
MRE11-204ENST00000407439 MAP3K19Q56UN5 1328 aa8.17□□□□□ -1.1
MRE11-204ENST00000407439 CHD2O14647 1828 aaKnown RBP8.17□□□□□ -1.1
MRE11-204ENST00000407439 HSP90AB2PQ58FF8 381 aa8.17□□□□□ -1.1
MRE11-204ENST00000407439 SULT6B1Q6IMI4 303 aa8.17□□□□□ -1.1
MRE11-204ENST00000407439 RWDD1Q9H446 243 aaPredicted RBP8.17□□□□□ -1.1
MRE11-204ENST00000407439 MBIPQ9NS73 344 aa8.17□□□□□ -1.1
MRE11-204ENST00000407439 NOB1Q9ULX3 412 aaKnown RBP8.17□□□□□ -1.1
MRE11-204ENST00000407439 RGPD8O14715 1765 aaPredicted RBP8.17□□□□□ -1.1
MRE11-204ENST00000407439 VAMP4O75379 141 aa8.16□□□□□ -1.1
MRE11-204ENST00000407439 RGS3P49796 1198 aa8.16□□□□□ -1.1
MRE11-204ENST00000407439 AEBP1Q8IUX7 1158 aa8.16□□□□□ -1.1
MRE11-204ENST00000407439 ARHGAP45Q92619 1136 aa8.16□□□□□ -1.1
MRE11-204ENST00000407439 THUMPD2Q9BTF0 503 aaKnown RBP8.16□□□□□ -1.1
MRE11-204ENST00000407439 FBXO3Q9UK99 471 aa8.16□□□□□ -1.1
MRE11-204ENST00000407439 HAP1P54257 671 aaPredicted RBP8.16□□□□□ -1.1
MRE11-204ENST00000407439 HDAC1Q13547 482 aaPredicted RBP8.16□□□□□ -1.1
MRE11-204ENST00000407439 ADGRL3Q9HAR2 1447 aa8.16□□□□□ -1.1
MRE11-204ENST00000407439 ITPRIPQ8IWB1 547 aa8.15□□□□□ -1.1
MRE11-204ENST00000407439 ZBTB40Q9NUA8 1239 aa8.15□□□□□ -1.1
MRE11-204ENST00000407439 ZBTB47Q9UFB7 747 aaPredicted RBP8.15□□□□□ -1.1
MRE11-204ENST00000407439 IGSF1Q8N6C5 1336 aa8.15□□□□□ -1.1
MRE11-204ENST00000407439 LAS1LQ9Y4W2 734 aaKnown RBP8.15□□□□□ -1.11
MRE11-204ENST00000407439 VIRMAQ69YN4 1812 aaKnown RBP8.14□□□□□ -1.11
MRE11-204ENST00000407439 MARF1Q9Y4F3 1742 aaKnown RBP8.14□□□□□ -1.11
MRE11-204ENST00000407439 RTL1A6NKG5 1358 aa8.14□□□□□ -1.11
MRE11-204ENST00000407439 PAK3O75914 559 aaPredicted RBP8.14□□□□□ -1.11
MRE11-204ENST00000407439 TWISTNBQ3B726 338 aaPredicted RBP8.14□□□□□ -1.11
MRE11-204ENST00000407439 NPM2Q86SE8 214 aaKnown RBP8.14□□□□□ -1.11
MRE11-204ENST00000407439 TMEM57Q8N5G2 664 aa8.14□□□□□ -1.11
MRE11-204ENST00000407439 MRPL50Q8N5N7 158 aaKnown RBP8.14□□□□□ -1.11
MRE11-204ENST00000407439 TSPYL6Q8N831 410 aa8.14□□□□□ -1.11
MRE11-204ENST00000407439 KIAA0232Q92628 1395 aa8.14□□□□□ -1.11
MRE11-204ENST00000407439 FAM83GA6ND36 823 aa8.14□□□□□ -1.11
MRE11-204ENST00000407439 DDRGK1Q96HY6 314 aa8.14□□□□□ -1.11
MRE11-204ENST00000407439 CHMP4BQ9H444 224 aaKnown RBP8.14□□□□□ -1.11
MRE11-204ENST00000407439 NPHP4O75161 1426 aaPredicted RBP8.13□□□□□ -1.11
MRE11-204ENST00000407439 ABCC4O15439 1325 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms