RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 NUDCQ9Y266 331 aa27.34■■□□□ 1.97
CHKB-201ENST00000406938 KIAA0232Q92628 1395 aa27.33■■□□□ 1.97
CHKB-201ENST00000406938 IL13P35225 146 aa27.33■■□□□ 1.97
CHKB-201ENST00000406938 IP6K1Q92551 441 aa27.33■■□□□ 1.97
CHKB-201ENST00000406938 EIF4A2Q14240 407 aaKnown RBP27.32■■□□□ 1.96
CHKB-201ENST00000406938 U2SURPO15042 1029 aaKnown RBP27.3■■□□□ 1.96
CHKB-201ENST00000406938 ABCC6O95255 1503 aa27.3■■□□□ 1.96
CHKB-201ENST00000406938 BLMP54132 1417 aaPredicted RBP27.29■■□□□ 1.96
CHKB-201ENST00000406938 U2AF1L5P0DN76 240 aaPredicted RBP27.29■■□□□ 1.96
CHKB-201ENST00000406938 U2AF1Q01081 240 aaKnown RBP eCLIP27.29■■□□□ 1.96
CHKB-201ENST00000406938 COL18A1P39060 1754 aa27.27■■□□□ 1.96
CHKB-201ENST00000406938 JCADQ9P266 1359 aa27.27■■□□□ 1.96
CHKB-201ENST00000406938 HSPA1LP34931 641 aa27.27■■□□□ 1.96
CHKB-201ENST00000406938 CHRNA2Q15822 529 aa27.27■■□□□ 1.96
CHKB-201ENST00000406938 PRDM11Q9NQV5 511 aa27.27■■□□□ 1.96
CHKB-201ENST00000406938 AXIN2Q9Y2T1 843 aa27.26■■□□□ 1.95
CHKB-201ENST00000406938 RGPD1P0DJD0 1748 aa27.26■■□□□ 1.95
CHKB-201ENST00000406938 LTV1Q96GA3 475 aaPredicted RBP27.24■■□□□ 1.95
CHKB-201ENST00000406938 LMO7Q8WWI1 1683 aa27.23■■□□□ 1.95
CHKB-201ENST00000406938 RGPD5Q99666 1765 aa27.22■■□□□ 1.95
CHKB-201ENST00000406938 HNRNPUQ00839 825 aaKnown RBP eCLIP27.21■■□□□ 1.95
CHKB-201ENST00000406938 CCDC146Q8IYE0 955 aa27.21■■□□□ 1.95
CHKB-201ENST00000406938 ANKRD24Q8TF21 1146 aa27.2■■□□□ 1.95
CHKB-201ENST00000406938 ERBB3P21860 1342 aa27.2■■□□□ 1.94
CHKB-201ENST00000406938 IGSF1Q8N6C5 1336 aa27.2■■□□□ 1.94
CHKB-201ENST00000406938 HMOX1P09601 288 aa27.19■■□□□ 1.94
CHKB-201ENST00000406938 EYA1Q99502 592 aa27.19■■□□□ 1.94
CHKB-201ENST00000406938 CAMTA1Q9Y6Y1 1673 aa27.18■■□□□ 1.94
CHKB-201ENST00000406938 FAM83GA6ND36 823 aa27.17■■□□□ 1.94
CHKB-201ENST00000406938 NUTM2BA6NNL0 878 aaPredicted RBP27.17■■□□□ 1.94
CHKB-201ENST00000406938 NUTM2EB1AL46 878 aaPredicted RBP27.17■■□□□ 1.94
CHKB-201ENST00000406938 NUTM2AQ8IVF1 878 aaPredicted RBP27.17■■□□□ 1.94
CHKB-201ENST00000406938 RSPH6AQ9H0K4 717 aa27.17■■□□□ 1.94
CHKB-201ENST00000406938 COL14A1Q05707 1796 aaKnown RBP27.17■■□□□ 1.94
CHKB-201ENST00000406938 FCHSD2O94868 740 aa27.16■■□□□ 1.94
CHKB-201ENST00000406938 SENP3-EIF4A1A0A087X0R7 540 aa27.16■■□□□ 1.94
CHKB-201ENST00000406938 SULT6B1Q6IMI4 303 aa27.16■■□□□ 1.94
CHKB-201ENST00000406938 AEBP1Q8IUX7 1158 aa27.16■■□□□ 1.94
CHKB-201ENST00000406938 ADAMTS2O95450 1211 aa27.15■■□□□ 1.94
CHKB-201ENST00000406938 RUNDC1Q96C34 613 aa27.15■■□□□ 1.94
CHKB-201ENST00000406938 COL5A2P05997 1499 aaPredicted RBP27.14■■□□□ 1.94
CHKB-201ENST00000406938 SPATA31A6Q5VVP1 1343 aa27.14■■□□□ 1.94
CHKB-201ENST00000406938 PRKAR2BP31323 418 aa27.14■■□□□ 1.94
CHKB-201ENST00000406938 PLEKHF1Q96S99 279 aa27.14■■□□□ 1.94
CHKB-201ENST00000406938 KDRP35968 1356 aa27.14■■□□□ 1.93
CHKB-201ENST00000406938 NBPF6Q5VWK0 638 aa27.13■■□□□ 1.93
CHKB-201ENST00000406938 NBPF4Q96M43 638 aa27.13■■□□□ 1.93
CHKB-201ENST00000406938 FAM208AQ9UK61 1670 aaKnown RBP27.12■■□□□ 1.93
CHKB-201ENST00000406938 RGPD2P0DJD1 1756 aa27.12■■□□□ 1.93
CHKB-201ENST00000406938 PNNQ9H307 717 aaKnown RBP27.12■■□□□ 1.93
CHKB-201ENST00000406938 USHBP1Q8N6Y0 703 aa27.11■■□□□ 1.93
CHKB-201ENST00000406938 LRP6O75581 1613 aa27.11■■□□□ 1.93
CHKB-201ENST00000406938 NCAPD2Q15021 1401 aa27.11■■□□□ 1.93
CHKB-201ENST00000406938 CSB-PGBD3P0DP91 1061 aa27.1■■□□□ 1.93
CHKB-201ENST00000406938 MAPK8IP3Q9UPT6 1336 aa27.1■■□□□ 1.93
CHKB-201ENST00000406938 PLCH1Q4KWH8 1693 aa27.1■■□□□ 1.93
CHKB-201ENST00000406938 APAF1O14727 1248 aa27.09■■□□□ 1.93
CHKB-201ENST00000406938 BTG4Q9NY30 223 aa27.08■■□□□ 1.93
CHKB-201ENST00000406938 WDR17Q8IZU2 1322 aa27.08■■□□□ 1.93
CHKB-201ENST00000406938 TCP11L2Q8N4U5 519 aa27.07■■□□□ 1.92
CHKB-201ENST00000406938 NLRP2Q9NX02 1062 aa27.07■■□□□ 1.92
CHKB-201ENST00000406938 ZBED9Q6R2W3 1325 aa27.07■■□□□ 1.92
CHKB-201ENST00000406938 STRN4Q9NRL3 753 aa27.05■■□□□ 1.92
CHKB-201ENST00000406938 NEFMP07197 916 aa27.05■■□□□ 1.92
CHKB-201ENST00000406938 PHACTR3Q96KR7 559 aa27.05■■□□□ 1.92
CHKB-201ENST00000406938 SALL2Q9Y467 1007 aaPredicted RBP27.05■■□□□ 1.92
CHKB-201ENST00000406938 EVA1CP58658 441 aa27.03■■□□□ 1.92
CHKB-201ENST00000406938 FBXO41Q8TF61 875 aa27.03■■□□□ 1.92
CHKB-201ENST00000406938 RRP7AQ9Y3A4 280 aaKnown RBP27.02■■□□□ 1.92
CHKB-201ENST00000406938 SLIT2O94813 1529 aa27.02■■□□□ 1.92
CHKB-201ENST00000406938 NRAPQ86VF7 1730 aa27.02■■□□□ 1.92
CHKB-201ENST00000406938 LARP1Q6PKG0 1096 aaKnown RBP27.01■■□□□ 1.92
CHKB-201ENST00000406938 TOM1L2Q6ZVM7 507 aa27.01■■□□□ 1.92
CHKB-201ENST00000406938 NWD2Q9ULI1 1742 aa27.01■■□□□ 1.91
CHKB-201ENST00000406938 C8orf37Q96NL8 207 aa27■■□□□ 1.91
CHKB-201ENST00000406938 CRB1P82279 1406 aa26.99■■□□□ 1.91
CHKB-201ENST00000406938 TMPOP42166 694 aaKnown RBP26.99■■□□□ 1.91
CHKB-201ENST00000406938 NEUROD2Q15784 382 aa26.99■■□□□ 1.91
CHKB-201ENST00000406938 NGEFQ8N5V2 710 aa26.98■■□□□ 1.91
CHKB-201ENST00000406938 NFE2L2Q16236 605 aa26.97■■□□□ 1.91
CHKB-201ENST00000406938 CARD10Q9BWT7 1032 aa26.97■■□□□ 1.91
CHKB-201ENST00000406938 MEX3CQ5U5Q3 659 aaKnown RBP26.96■■□□□ 1.91
CHKB-201ENST00000406938 NGLY1Q96IV0 654 aa26.96■■□□□ 1.91
CHKB-201ENST00000406938 MEGF6O75095 1541 aa26.95■■□□□ 1.91
CHKB-201ENST00000406938 ZNF521Q96K83 1311 aa26.94■■□□□ 1.9
CHKB-201ENST00000406938 RIPK4P57078 832 aa26.94■■□□□ 1.9
CHKB-201ENST00000406938 RAPGEF4Q8WZA2 1011 aa26.94■■□□□ 1.9
CHKB-201ENST00000406938 MTHFSDQ2M296 383 aaKnown RBP26.93■■□□□ 1.9
CHKB-201ENST00000406938 NCBP3Q53F19 620 aaKnown RBP26.93■■□□□ 1.9
CHKB-201ENST00000406938 CCDC27Q2M243 656 aa26.92■■□□□ 1.9
CHKB-201ENST00000406938 PHF23Q9BUL5 403 aaPredicted RBP26.92■■□□□ 1.9
CHKB-201ENST00000406938 BCL9LQ86UU0 1499 aa26.92■■□□□ 1.9
CHKB-201ENST00000406938 FNBP4Q8N3X1 1017 aaPredicted RBP26.91■■□□□ 1.9
CHKB-201ENST00000406938 USP35Q9P2H5 1018 aa26.91■■□□□ 1.9
CHKB-201ENST00000406938 WWC1Q8IX03 1113 aa26.9■■□□□ 1.9
CHKB-201ENST00000406938 GAS2L2Q8NHY3 880 aa26.9■■□□□ 1.9
CHKB-201ENST00000406938 PLEKHG2Q9H7P9 1386 aa26.9■■□□□ 1.9
CHKB-201ENST00000406938 TATP17735 454 aaPredicted RBP26.9■■□□□ 1.9
CHKB-201ENST00000406938 UNC5CLQ8IV45 518 aa26.9■■□□□ 1.9
CHKB-201ENST00000406938 TRIM35Q9UPQ4 493 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms