RNA–Protein interactions for RNA: ENST00000401499.1

AC008060.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008060.1, Length 1,551 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008060.1-201ENST00000401499 ARHGEF25Q86VW2 580 aa25.81■■□□□ 1.72
AC008060.1-201ENST00000401499 CABLES1Q8TDN4 633 aa25.81■■□□□ 1.72
AC008060.1-201ENST00000401499 PHLPP1O60346 1717 aa25.8■■□□□ 1.72
AC008060.1-201ENST00000401499 COL16A1Q07092 1604 aaPredicted RBP25.79■■□□□ 1.72
AC008060.1-201ENST00000401499 RUNDC1Q96C34 613 aa25.78■■□□□ 1.72
AC008060.1-201ENST00000401499 RGPD5Q99666 1765 aa25.78■■□□□ 1.72
AC008060.1-201ENST00000401499 IP6K1Q92551 441 aa25.78■■□□□ 1.72
AC008060.1-201ENST00000401499 COL18A1P39060 1754 aa25.77■■□□□ 1.72
AC008060.1-201ENST00000401499 CERKQ8TCT0 537 aa25.77■■□□□ 1.72
AC008060.1-201ENST00000401499 PLEKHF1Q96S99 279 aa25.77■■□□□ 1.72
AC008060.1-201ENST00000401499 SALL2Q9Y467 1007 aaPredicted RBP25.77■■□□□ 1.72
AC008060.1-201ENST00000401499 ZBTB7CA1YPR0 619 aa25.76■■□□□ 1.71
AC008060.1-201ENST00000401499 UBAP1LF5GYI3 381 aa25.76■■□□□ 1.71
AC008060.1-201ENST00000401499 APAF1O14727 1248 aa25.76■■□□□ 1.71
AC008060.1-201ENST00000401499 RSPH6AQ9H0K4 717 aa25.76■■□□□ 1.71
AC008060.1-201ENST00000401499 PIP4K2BP78356 416 aa25.75■■□□□ 1.71
AC008060.1-201ENST00000401499 COL22A1Q8NFW1 1626 aaPredicted RBP25.74■■□□□ 1.71
AC008060.1-201ENST00000401499 HMOX1P09601 288 aa25.74■■□□□ 1.71
AC008060.1-201ENST00000401499 ZC3H6P61129 1189 aaKnown RBP25.74■■□□□ 1.71
AC008060.1-201ENST00000401499 FCHSD2O94868 740 aa25.73■■□□□ 1.71
AC008060.1-201ENST00000401499 RGPD2P0DJD1 1756 aa25.73■■□□□ 1.71
AC008060.1-201ENST00000401499 CPDO75976 1380 aa25.72■■□□□ 1.71
AC008060.1-201ENST00000401499 ABCC6O95255 1503 aa25.71■■□□□ 1.71
AC008060.1-201ENST00000401499 TCP11L2Q8N4U5 519 aa25.71■■□□□ 1.71
AC008060.1-201ENST00000401499 LRRC59Q96AG4 307 aaKnown RBP25.71■■□□□ 1.71
AC008060.1-201ENST00000401499 PRKAR2BP31323 418 aa25.7■■□□□ 1.71
AC008060.1-201ENST00000401499 AEBP1Q8IUX7 1158 aa25.7■■□□□ 1.71
AC008060.1-201ENST00000401499 IGSF1Q8N6C5 1336 aa25.7■■□□□ 1.7
AC008060.1-201ENST00000401499 KIAA0232Q92628 1395 aa25.69■■□□□ 1.7
AC008060.1-201ENST00000401499 EYA1Q99502 592 aa25.69■■□□□ 1.7
AC008060.1-201ENST00000401499 AXIN2Q9Y2T1 843 aa25.69■■□□□ 1.7
AC008060.1-201ENST00000401499 LTV1Q96GA3 475 aaPredicted RBP25.69■■□□□ 1.7
AC008060.1-201ENST00000401499 ZNF521Q96K83 1311 aa25.68■■□□□ 1.7
AC008060.1-201ENST00000401499 SULT6B1Q6IMI4 303 aa25.68■■□□□ 1.7
AC008060.1-201ENST00000401499 KDRP35968 1356 aa25.67■■□□□ 1.7
AC008060.1-201ENST00000401499 CAMTA1Q9Y6Y1 1673 aa25.67■■□□□ 1.7
AC008060.1-201ENST00000401499 PNNQ9H307 717 aaKnown RBP25.67■■□□□ 1.7
AC008060.1-201ENST00000401499 RRP7AQ9Y3A4 280 aaKnown RBP25.67■■□□□ 1.7
AC008060.1-201ENST00000401499 LMO7Q8WWI1 1683 aa25.66■■□□□ 1.7
AC008060.1-201ENST00000401499 MAPK8IP3Q9UPT6 1336 aa25.66■■□□□ 1.7
AC008060.1-201ENST00000401499 PHACTR3Q96KR7 559 aa25.65■■□□□ 1.7
AC008060.1-201ENST00000401499 CHRNA2Q15822 529 aa25.64■■□□□ 1.69
AC008060.1-201ENST00000401499 NGEFQ8N5V2 710 aa25.64■■□□□ 1.69
AC008060.1-201ENST00000401499 ANKRD24Q8TF21 1146 aa25.63■■□□□ 1.69
AC008060.1-201ENST00000401499 DLG5Q8TDM6 1919 aa25.63■■□□□ 1.69
AC008060.1-201ENST00000401499 TMPOP42166 694 aaKnown RBP25.62■■□□□ 1.69
AC008060.1-201ENST00000401499 NEUROD2Q15784 382 aa25.62■■□□□ 1.69
AC008060.1-201ENST00000401499 PHF23Q9BUL5 403 aaPredicted RBP25.62■■□□□ 1.69
AC008060.1-201ENST00000401499 HAP1P54257 671 aaPredicted RBP25.61■■□□□ 1.69
AC008060.1-201ENST00000401499 ERBB3P21860 1342 aa25.61■■□□□ 1.69
AC008060.1-201ENST00000401499 NCAPD2Q15021 1401 aa25.61■■□□□ 1.69
AC008060.1-201ENST00000401499 FAM208AQ9UK61 1670 aaKnown RBP25.61■■□□□ 1.69
AC008060.1-201ENST00000401499 NCBP3Q53F19 620 aaKnown RBP25.61■■□□□ 1.69
AC008060.1-201ENST00000401499 NBPF6Q5VWK0 638 aa25.61■■□□□ 1.69
AC008060.1-201ENST00000401499 NBPF4Q96M43 638 aa25.61■■□□□ 1.69
AC008060.1-201ENST00000401499 CDCA7LQ96GN5 454 aa25.6■■□□□ 1.69
AC008060.1-201ENST00000401499 PDE3BQ13370 1112 aa25.59■■□□□ 1.69
AC008060.1-201ENST00000401499 WWC1Q8IX03 1113 aa25.59■■□□□ 1.69
AC008060.1-201ENST00000401499 USHBP1Q8N6Y0 703 aa25.59■■□□□ 1.69
AC008060.1-201ENST00000401499 PRDM11Q9NQV5 511 aa25.59■■□□□ 1.69
AC008060.1-201ENST00000401499 CCDC27Q2M243 656 aa25.58■■□□□ 1.69
AC008060.1-201ENST00000401499 NEFMP07197 916 aa25.56■■□□□ 1.68
AC008060.1-201ENST00000401499 NFE2L2Q16236 605 aa25.56■■□□□ 1.68
AC008060.1-201ENST00000401499 TRIM35Q9UPQ4 493 aa25.56■■□□□ 1.68
AC008060.1-201ENST00000401499 COL14A1Q05707 1796 aaKnown RBP25.54■■□□□ 1.68
AC008060.1-201ENST00000401499 COL5A2P05997 1499 aaPredicted RBP25.54■■□□□ 1.68
AC008060.1-201ENST00000401499 RIPK4P57078 832 aa25.54■■□□□ 1.68
AC008060.1-201ENST00000401499 GOLGA2Q08379 1002 aa25.53■■□□□ 1.68
AC008060.1-201ENST00000401499 SPINK5Q9NQ38 1064 aaPredicted RBP25.52■■□□□ 1.68
AC008060.1-201ENST00000401499 FAM83GA6ND36 823 aa25.52■■□□□ 1.68
AC008060.1-201ENST00000401499 SLFN5Q08AF3 891 aa25.49■■□□□ 1.67
AC008060.1-201ENST00000401499 PLCH1Q4KWH8 1693 aa25.49■■□□□ 1.67
AC008060.1-201ENST00000401499 MTHFSDQ2M296 383 aaKnown RBP25.48■■□□□ 1.67
AC008060.1-201ENST00000401499 WDR63Q8IWG1 891 aa25.48■■□□□ 1.67
AC008060.1-201ENST00000401499 TRMT2AQ8IZ69 625 aaKnown RBP25.48■■□□□ 1.67
AC008060.1-201ENST00000401499 JCADQ9P266 1359 aa25.47■■□□□ 1.67
AC008060.1-201ENST00000401499 CSB-PGBD3P0DP91 1061 aa25.47■■□□□ 1.67
AC008060.1-201ENST00000401499 DUSP27Q5VZP5 1158 aa25.47■■□□□ 1.67
AC008060.1-201ENST00000401499 NLRP2Q9NX02 1062 aa25.47■■□□□ 1.67
AC008060.1-201ENST00000401499 WDR17Q8IZU2 1322 aa25.46■■□□□ 1.67
AC008060.1-201ENST00000401499 E9PSI1 815 aa25.44■■□□□ 1.66
AC008060.1-201ENST00000401499 NRAPQ86VF7 1730 aa25.43■■□□□ 1.66
AC008060.1-201ENST00000401499 GAS2L2Q8NHY3 880 aa25.43■■□□□ 1.66
AC008060.1-201ENST00000401499 MEGF6O75095 1541 aa25.42■■□□□ 1.66
AC008060.1-201ENST00000401499 THUMPD2Q9BTF0 503 aaKnown RBP25.42■■□□□ 1.66
AC008060.1-201ENST00000401499 BTG4Q9NY30 223 aa25.42■■□□□ 1.66
AC008060.1-201ENST00000401499 NUTM2BA6NNL0 878 aaPredicted RBP25.41■■□□□ 1.66
AC008060.1-201ENST00000401499 NUTM2EB1AL46 878 aaPredicted RBP25.41■■□□□ 1.66
AC008060.1-201ENST00000401499 ADAMTS2O95450 1211 aa25.41■■□□□ 1.66
AC008060.1-201ENST00000401499 HSPA1LP34931 641 aa25.41■■□□□ 1.66
AC008060.1-201ENST00000401499 LMOD3Q0VAK6 560 aa25.41■■□□□ 1.66
AC008060.1-201ENST00000401499 NUTM2AQ8IVF1 878 aaPredicted RBP25.41■■□□□ 1.66
AC008060.1-201ENST00000401499 STRN4Q9NRL3 753 aa25.4■■□□□ 1.66
AC008060.1-201ENST00000401499 DCTN1Q14203 1278 aa25.39■■□□□ 1.66
AC008060.1-201ENST00000401499 LARP1Q6PKG0 1096 aaKnown RBP25.39■■□□□ 1.66
AC008060.1-201ENST00000401499 IL16Q14005 1332 aa25.39■■□□□ 1.66
AC008060.1-201ENST00000401499 LRRC37A3O60309 1634 aa25.39■■□□□ 1.66
AC008060.1-201ENST00000401499 PKD1L3Q7Z443 1732 aa25.39■■□□□ 1.65
AC008060.1-201ENST00000401499 TOM1L2Q6ZVM7 507 aa25.39■■□□□ 1.65
AC008060.1-201ENST00000401499 PARP4Q9UKK3 1724 aaKnown RBP25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms