RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 SPATA24Q86W54 205 aa16.44■□□□□ 0.22
RERE-204ENST00000400908 SCAPERQ9BY12 1400 aa16.44■□□□□ 0.22
RERE-204ENST00000400908 TRAK2O60296 914 aa16.44■□□□□ 0.22
RERE-204ENST00000400908 MSH5O43196 834 aa16.44■□□□□ 0.22
RERE-204ENST00000400908 HSP90AB4PQ58FF6 505 aa16.44■□□□□ 0.22
RERE-204ENST00000400908 TTC5Q8N0Z6 440 aa16.44■□□□□ 0.22
RERE-204ENST00000400908 SPC24Q8NBT2 197 aa16.44■□□□□ 0.22
RERE-204ENST00000400908 TEFQ10587 303 aa16.43■□□□□ 0.22
RERE-204ENST00000400908 CFAP70Q5T0N1 1121 aa16.43■□□□□ 0.22
RERE-204ENST00000400908 API5Q9BZZ5 524 aaKnown RBP16.43■□□□□ 0.22
RERE-204ENST00000400908 UQCRHLA0A096LP55 91 aa16.42■□□□□ 0.22
RERE-204ENST00000400908 UQCRHP07919 91 aa16.42■□□□□ 0.22
RERE-204ENST00000400908 AEBP1Q8IUX7 1158 aa16.42■□□□□ 0.22
RERE-204ENST00000400908 NGEFQ8N5V2 710 aa16.42■□□□□ 0.22
RERE-204ENST00000400908 DACH1Q9UI36 760 aa16.42■□□□□ 0.22
RERE-204ENST00000400908 RRP9O43818 475 aaKnown RBP16.41■□□□□ 0.22
RERE-204ENST00000400908 DDX58O95786 925 aaKnown RBP16.41■□□□□ 0.22
RERE-204ENST00000400908 ZNF396Q96N95 335 aaPredicted RBP16.41■□□□□ 0.22
RERE-204ENST00000400908 CAMSAP2Q08AD1 1489 aa16.41■□□□□ 0.22
RERE-204ENST00000400908 CFAP45Q9UL16 551 aa16.41■□□□□ 0.22
RERE-204ENST00000400908 LRRFIP2Q9Y608 721 aaKnown RBP16.41■□□□□ 0.22
RERE-204ENST00000400908 CCDC27Q2M243 656 aa16.41■□□□□ 0.22
RERE-204ENST00000400908 WASHC4Q2M389 1173 aa16.41■□□□□ 0.22
RERE-204ENST00000400908 EIF2S2P20042 333 aaKnown RBP16.4■□□□□ 0.22
RERE-204ENST00000400908 SART3Q15020 963 aaKnown RBP16.4■□□□□ 0.22
RERE-204ENST00000400908 NEBLO76041 1014 aa16.4■□□□□ 0.22
RERE-204ENST00000400908 IKQ13123 557 aaPredicted RBP16.4■□□□□ 0.22
RERE-204ENST00000400908 IBSPP21815 317 aaPredicted RBP16.4■□□□□ 0.22
RERE-204ENST00000400908 STIM1Q13586 685 aa16.4■□□□□ 0.22
RERE-204ENST00000400908 PDCL2Q8N4E4 241 aa16.39■□□□□ 0.21
RERE-204ENST00000400908 CBFA2T2O43439 604 aa16.39■□□□□ 0.21
RERE-204ENST00000400908 DESP17661 470 aa16.39■□□□□ 0.21
RERE-204ENST00000400908 ATP2B1P20020 1258 aa16.39■□□□□ 0.21
RERE-204ENST00000400908 PDCP20941 246 aa16.39■□□□□ 0.21
RERE-204ENST00000400908 TMCO3Q6UWJ1 677 aa16.38■□□□□ 0.21
RERE-204ENST00000400908 ABCC5O15440 1437 aa16.38■□□□□ 0.21
RERE-204ENST00000400908 FYB1O15117 783 aa16.38■□□□□ 0.21
RERE-204ENST00000400908 TANGO6Q9C0B7 1094 aa16.38■□□□□ 0.21
RERE-204ENST00000400908 CDC45O75419 566 aa16.38■□□□□ 0.21
RERE-204ENST00000400908 STK38Q15208 465 aa16.38■□□□□ 0.21
RERE-204ENST00000400908 JAKMIP3Q5VZ66 844 aa16.38■□□□□ 0.21
RERE-204ENST00000400908 GBP3Q9H0R5 595 aa16.38■□□□□ 0.21
RERE-204ENST00000400908 CABP2Q9NPB3 220 aa16.38■□□□□ 0.21
RERE-204ENST00000400908 DZIP1LQ8IYY4 767 aaKnown RBP16.38■□□□□ 0.21
RERE-204ENST00000400908 FAM177A1Q8N128 213 aaPredicted RBP16.38■□□□□ 0.21
RERE-204ENST00000400908 DDX11Q96FC9 970 aa16.38■□□□□ 0.21
RERE-204ENST00000400908 NINLQ9Y2I6 1382 aa16.38■□□□□ 0.21
RERE-204ENST00000400908 CCDC192P0DO97 292 aa16.37■□□□□ 0.21
RERE-204ENST00000400908 JMYQ8N9B5 988 aa16.37■□□□□ 0.21
RERE-204ENST00000400908 CRACR2AQ9BSW2 395 aa16.37■□□□□ 0.21
RERE-204ENST00000400908 PRPF40AO75400 957 aaKnown RBP16.37■□□□□ 0.21
RERE-204ENST00000400908 TAF4BQ92750 862 aa16.37■□□□□ 0.21
RERE-204ENST00000400908 DIAPH1O60610 1272 aaKnown RBP16.37■□□□□ 0.21
RERE-204ENST00000400908 MTMR7Q9Y216 660 aa16.37■□□□□ 0.21
RERE-204ENST00000400908 KIF14Q15058 1648 aa16.36■□□□□ 0.21
RERE-204ENST00000400908 GPATCH11Q8N954 259 aa16.36■□□□□ 0.21
RERE-204ENST00000400908 CFAP57Q96MR6 1250 aa16.36■□□□□ 0.21
RERE-204ENST00000400908 BRD4O60885 1362 aaPredicted RBP16.36■□□□□ 0.21
RERE-204ENST00000400908 CCDC141Q6ZP82 1450 aa16.36■□□□□ 0.21
RERE-204ENST00000400908 BRPF3Q9ULD4 1205 aa16.36■□□□□ 0.21
RERE-204ENST00000400908 KDM4AO75164 1064 aa16.36■□□□□ 0.21
RERE-204ENST00000400908 MICALCLQ6ZW33 695 aa16.35■□□□□ 0.21
RERE-204ENST00000400908 IPO4Q8TEX9 1081 aaKnown RBP16.35■□□□□ 0.21
RERE-204ENST00000400908 FAM107BQ9H098 131 aa16.34■□□□□ 0.21
RERE-204ENST00000400908 NEUROD6Q96NK8 337 aa16.34■□□□□ 0.21
RERE-204ENST00000400908 SMC1AQ14683 1233 aaKnown RBP16.34■□□□□ 0.21
RERE-204ENST00000400908 UBXN4Q92575 508 aa16.34■□□□□ 0.21
RERE-204ENST00000400908 FIBPO43427 364 aa16.33■□□□□ 0.2
RERE-204ENST00000400908 MCM2P49736 904 aa16.33■□□□□ 0.2
RERE-204ENST00000400908 FKBP5Q13451 457 aaPredicted RBP16.33■□□□□ 0.2
RERE-204ENST00000400908 DDX23Q9BUQ8 820 aaKnown RBP16.33■□□□□ 0.2
RERE-204ENST00000400908 CCDC148Q8NFR7 591 aa16.33■□□□□ 0.2
RERE-204ENST00000400908 RUNDC1Q96C34 613 aa16.33■□□□□ 0.2
RERE-204ENST00000400908 GGNBP2Q9H3C7 697 aa16.33■□□□□ 0.2
RERE-204ENST00000400908 CALCOCO1Q9P1Z2 691 aa16.33■□□□□ 0.2
RERE-204ENST00000400908 RAPGEF3O95398 923 aa16.33■□□□□ 0.2
RERE-204ENST00000400908 RBM25P49756 843 aaKnown RBP16.32■□□□□ 0.2
RERE-204ENST00000400908 CCDC113Q9H0I3 377 aa16.32■□□□□ 0.2
RERE-204ENST00000400908 LNPKQ9C0E8 428 aa16.32■□□□□ 0.2
RERE-204ENST00000400908 CNTROBQ8N137 903 aa16.32■□□□□ 0.2
RERE-204ENST00000400908 TNMDQ9H2S6 317 aa16.32■□□□□ 0.2
RERE-204ENST00000400908 FEZ1Q99689 392 aa16.32■□□□□ 0.2
RERE-204ENST00000400908 ADAMTS8Q9UP79 889 aa16.31■□□□□ 0.2
RERE-204ENST00000400908 AKNAQ7Z591 1439 aa16.31■□□□□ 0.2
RERE-204ENST00000400908 RIPK4P57078 832 aa16.31■□□□□ 0.2
RERE-204ENST00000400908 CETN2P41208 172 aa16.3■□□□□ 0.2
RERE-204ENST00000400908 ZHX3Q9H4I2 956 aa16.3■□□□□ 0.2
RERE-204ENST00000400908 ANKRD18BA2A2Z9 1011 aa16.3■□□□□ 0.2
RERE-204ENST00000400908 EVA1CP58658 441 aa16.3■□□□□ 0.2
RERE-204ENST00000400908 RNF187Q5TA31 235 aaPredicted RBP16.3■□□□□ 0.2
RERE-204ENST00000400908 ANKRD30BQ9BXX2 1392 aa16.3■□□□□ 0.2
RERE-204ENST00000400908 MAP9Q49MG5 647 aa16.3■□□□□ 0.2
RERE-204ENST00000400908 FSD1Q9BTV5 496 aa16.3■□□□□ 0.2
RERE-204ENST00000400908 SLC3A2P08195 630 aaKnown RBP16.3■□□□□ 0.2
RERE-204ENST00000400908 KIAA1328Q86T90 577 aa16.3■□□□□ 0.2
RERE-204ENST00000400908 NECTIN2Q92692 538 aa16.3■□□□□ 0.2
RERE-204ENST00000400908 CEBPZQ03701 1054 aaKnown RBP16.29■□□□□ 0.2
RERE-204ENST00000400908 GRIPAP1Q4V328 841 aa16.29■□□□□ 0.2
RERE-204ENST00000400908 THOC2Q8NI27 1593 aaKnown RBP16.29■□□□□ 0.2
RERE-204ENST00000400908 PPP2R1AP30153 589 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms