RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 GAS2L2Q8NHY3 880 aa16.65■□□□□ 0.26
SIRPA-203ENST00000400068 NPC1L1Q9UHC9 1359 aa16.65■□□□□ 0.26
SIRPA-203ENST00000400068 PLCB2Q00722 1185 aa16.65■□□□□ 0.26
SIRPA-203ENST00000400068 HDGFL1Q5TGJ6 251 aa16.65■□□□□ 0.26
SIRPA-203ENST00000400068 EXOC6BQ9Y2D4 811 aa16.65■□□□□ 0.26
SIRPA-203ENST00000400068 RBM10P98175 930 aaKnown RBP16.65■□□□□ 0.26
SIRPA-203ENST00000400068 TAF7LQ5H9L4 462 aa16.65■□□□□ 0.26
SIRPA-203ENST00000400068 TTC21BQ7Z4L5 1316 aa16.65■□□□□ 0.26
SIRPA-203ENST00000400068 PLXNC1O60486 1568 aa16.64■□□□□ 0.25
SIRPA-203ENST00000400068 EIF4A2Q14240 407 aaKnown RBP16.64■□□□□ 0.25
SIRPA-203ENST00000400068 FGD1P98174 961 aa16.64■□□□□ 0.25
SIRPA-203ENST00000400068 ANKLE2Q86XL3 938 aa16.64■□□□□ 0.25
SIRPA-203ENST00000400068 ANO2Q9NQ90 1003 aa16.64■□□□□ 0.25
SIRPA-203ENST00000400068 IFT57Q9NWB7 429 aa16.64■□□□□ 0.25
SIRPA-203ENST00000400068 NINLQ9Y2I6 1382 aa16.64■□□□□ 0.25
SIRPA-203ENST00000400068 ZNF530Q6P9A1 599 aaPredicted RBP16.62■□□□□ 0.25
SIRPA-203ENST00000400068 GBP4Q96PP9 640 aa16.62■□□□□ 0.25
SIRPA-203ENST00000400068 UNC13BO14795 1591 aa16.62■□□□□ 0.25
SIRPA-203ENST00000400068 CFAP44Q96MT7 982 aa16.62■□□□□ 0.25
SIRPA-203ENST00000400068 MAP4K4O95819 1239 aaPredicted RBP16.62■□□□□ 0.25
SIRPA-203ENST00000400068 UBTFL1P0CB47 393 aaPredicted RBP16.62■□□□□ 0.25
SIRPA-203ENST00000400068 RSPH6AQ9H0K4 717 aa16.62■□□□□ 0.25
SIRPA-203ENST00000400068 ZNF521Q96K83 1311 aa16.62■□□□□ 0.25
SIRPA-203ENST00000400068 ANXA1P04083 346 aa16.62■□□□□ 0.25
SIRPA-203ENST00000400068 IL1RAPL2Q9NP60 686 aa16.62■□□□□ 0.25
SIRPA-203ENST00000400068 TSPOAP1O95153 1857 aa16.61■□□□□ 0.25
SIRPA-203ENST00000400068 SURF6O75683 361 aaKnown RBP16.61■□□□□ 0.25
SIRPA-203ENST00000400068 CCDC27Q2M243 656 aa16.61■□□□□ 0.25
SIRPA-203ENST00000400068 ABCC11Q96J66 1382 aa16.61■□□□□ 0.25
SIRPA-203ENST00000400068 KDM2BQ8NHM5 1336 aa16.61■□□□□ 0.25
SIRPA-203ENST00000400068 LTKP29376 864 aa16.61■□□□□ 0.25
SIRPA-203ENST00000400068 CCDC30Q5VVM6 783 aa16.61■□□□□ 0.25
SIRPA-203ENST00000400068 TSHZ3Q63HK5 1081 aa16.61■□□□□ 0.25
SIRPA-203ENST00000400068 E9PCH4 1651 aa16.6■□□□□ 0.25
SIRPA-203ENST00000400068 HSP90AA2PQ14568 343 aaPredicted RBP16.6■□□□□ 0.25
SIRPA-203ENST00000400068 RAPGEF4Q8WZA2 1011 aa16.6■□□□□ 0.25
SIRPA-203ENST00000400068 BRPF3Q9ULD4 1205 aa16.6■□□□□ 0.25
SIRPA-203ENST00000400068 CDC45O75419 566 aa16.59■□□□□ 0.25
SIRPA-203ENST00000400068 ATF3P18847 181 aa16.59■□□□□ 0.25
SIRPA-203ENST00000400068 GCC1Q96CN9 775 aa16.59■□□□□ 0.25
SIRPA-203ENST00000400068 KDM5AP29375 1690 aaKnown RBP16.59■□□□□ 0.25
SIRPA-203ENST00000400068 PPP6R1Q9UPN7 881 aa16.59■□□□□ 0.25
SIRPA-203ENST00000400068 VAMP4O75379 141 aa16.59■□□□□ 0.25
SIRPA-203ENST00000400068 ALDH1L2Q3SY69 923 aa16.59■□□□□ 0.25
SIRPA-203ENST00000400068 KCNA6P17658 529 aa16.59■□□□□ 0.25
SIRPA-203ENST00000400068 MPRIPQ6WCQ1 1025 aa16.59■□□□□ 0.25
SIRPA-203ENST00000400068 CHMP5Q9NZZ3 219 aa16.59■□□□□ 0.25
SIRPA-203ENST00000400068 PHF8Q9UPP1 1060 aa16.58■□□□□ 0.25
SIRPA-203ENST00000400068 GOLGA6L3A6NEY3 463 aa16.58■□□□□ 0.24
SIRPA-203ENST00000400068 ST18O60284 1047 aa16.58■□□□□ 0.24
SIRPA-203ENST00000400068 METP08581 1390 aa16.57■□□□□ 0.24
SIRPA-203ENST00000400068 HOMEZQ8IX15 550 aa16.57■□□□□ 0.24
SIRPA-203ENST00000400068 GNAT3A8MTJ3 354 aa16.57■□□□□ 0.24
SIRPA-203ENST00000400068 MLH3Q9UHC1 1453 aa16.57■□□□□ 0.24
SIRPA-203ENST00000400068 GNAI2P04899 355 aa16.56■□□□□ 0.24
SIRPA-203ENST00000400068 C16orf71Q8IYS4 520 aaPredicted RBP16.56■□□□□ 0.24
SIRPA-203ENST00000400068 TBC1D2Q9BYX2 928 aa16.56■□□□□ 0.24
SIRPA-203ENST00000400068 CLASP1Q7Z460 1538 aa16.56■□□□□ 0.24
SIRPA-203ENST00000400068 MEIS3Q99687 375 aa16.56■□□□□ 0.24
SIRPA-203ENST00000400068 INTS3Q68E01 1043 aaKnown RBP16.56■□□□□ 0.24
SIRPA-203ENST00000400068 PUS7Q96PZ0 661 aaKnown RBP16.56■□□□□ 0.24
SIRPA-203ENST00000400068 NEO1Q92859 1461 aa16.56■□□□□ 0.24
SIRPA-203ENST00000400068 TTC5Q8N0Z6 440 aa16.56■□□□□ 0.24
SIRPA-203ENST00000400068 TET3O43151 1660 aa16.56■□□□□ 0.24
SIRPA-203ENST00000400068 IL13P35225 146 aa16.55■□□□□ 0.24
SIRPA-203ENST00000400068 MTHFSDQ2M296 383 aaKnown RBP16.55■□□□□ 0.24
SIRPA-203ENST00000400068 KIF1BO60333 1816 aa16.55■□□□□ 0.24
SIRPA-203ENST00000400068 MYL6BP14649 208 aa16.55■□□□□ 0.24
SIRPA-203ENST00000400068 TRMT2AQ8IZ69 625 aaKnown RBP16.55■□□□□ 0.24
SIRPA-203ENST00000400068 MRPL50Q8N5N7 158 aaKnown RBP16.55■□□□□ 0.24
SIRPA-203ENST00000400068 DDX49Q9Y6V7 483 aaKnown RBP16.55■□□□□ 0.24
SIRPA-203ENST00000400068 EFCAB6Q5THR3 1501 aa16.55■□□□□ 0.24
SIRPA-203ENST00000400068 MAP3K19Q56UN5 1328 aa16.54■□□□□ 0.24
SIRPA-203ENST00000400068 SBNO2Q9Y2G9 1366 aa16.54■□□□□ 0.24
SIRPA-203ENST00000400068 PTMAP06454 111 aaKnown RBP16.54■□□□□ 0.24
SIRPA-203ENST00000400068 REC8O95072 547 aa16.54■□□□□ 0.24
SIRPA-203ENST00000400068 L1TD1Q5T7N2 865 aaKnown RBP16.54■□□□□ 0.24
SIRPA-203ENST00000400068 RIC3Q7Z5B4 369 aa16.54■□□□□ 0.24
SIRPA-203ENST00000400068 MYOM2P54296 1465 aa16.53■□□□□ 0.24
SIRPA-203ENST00000400068 SIL1Q9H173 461 aa16.53■□□□□ 0.24
SIRPA-203ENST00000400068 IL16Q14005 1332 aa16.53■□□□□ 0.24
SIRPA-203ENST00000400068 GNAI3P08754 354 aa16.53■□□□□ 0.24
SIRPA-203ENST00000400068 LRRC59Q96AG4 307 aaKnown RBP16.53■□□□□ 0.24
SIRPA-203ENST00000400068 SPHKAPQ2M3C7 1700 aa16.53■□□□□ 0.24
SIRPA-203ENST00000400068 EVA1CP58658 441 aa16.53■□□□□ 0.24
SIRPA-203ENST00000400068 PLEKHO1Q53GL0 409 aaPredicted RBP16.53■□□□□ 0.24
SIRPA-203ENST00000400068 MADDQ8WXG6 1647 aa16.52■□□□□ 0.24
SIRPA-203ENST00000400068 SYTL4Q96C24 671 aaPredicted RBP16.52■□□□□ 0.24
SIRPA-203ENST00000400068 EYA1Q99502 592 aa16.52■□□□□ 0.24
SIRPA-203ENST00000400068 ZBTB40Q9NUA8 1239 aa16.52■□□□□ 0.24
SIRPA-203ENST00000400068 ABCC3O15438 1527 aa16.52■□□□□ 0.24
SIRPA-203ENST00000400068 SYNMO15061 1565 aa16.52■□□□□ 0.24
SIRPA-203ENST00000400068 NUTM1Q86Y26 1132 aa16.52■□□□□ 0.24
SIRPA-203ENST00000400068 BTBD11A6QL63 1104 aa16.52■□□□□ 0.23
SIRPA-203ENST00000400068 NEK4P51957 841 aa16.51■□□□□ 0.23
SIRPA-203ENST00000400068 DIAPH3Q9NSV4 1193 aa16.51■□□□□ 0.23
SIRPA-203ENST00000400068 IFIT2P09913 472 aaKnown RBP16.51■□□□□ 0.23
SIRPA-203ENST00000400068 STRN4Q9NRL3 753 aa16.51■□□□□ 0.23
SIRPA-203ENST00000400068 PLEKHF1Q96S99 279 aa16.51■□□□□ 0.23
SIRPA-203ENST00000400068 RNF17Q9BXT8 1623 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms