RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 TTC21BQ7Z4L5 1316 aa6.06□□□□□ -1.44
SMAD4-202ENST00000398417 MTHFSDQ2M296 383 aaKnown RBP6.06□□□□□ -1.44
SMAD4-202ENST00000398417 G2E3Q7L622 706 aa6.06□□□□□ -1.44
SMAD4-202ENST00000398417 PANK2Q9BZ23 570 aa6.06□□□□□ -1.44
SMAD4-202ENST00000398417 GRPEL1Q9HAV7 217 aa6.06□□□□□ -1.44
SMAD4-202ENST00000398417 ACEP12821 1306 aa6.05□□□□□ -1.44
SMAD4-202ENST00000398417 MEIS3Q99687 375 aa6.05□□□□□ -1.44
SMAD4-202ENST00000398417 YEATS2Q9ULM3 1422 aa6.05□□□□□ -1.44
SMAD4-202ENST00000398417 XRCC6P12956 609 aaKnown RBP eCLIP6.05□□□□□ -1.44
SMAD4-202ENST00000398417 SKOR2Q2VWA4 1001 aaPredicted RBP6.05□□□□□ -1.44
SMAD4-202ENST00000398417 CCDC61Q9Y6R9 512 aa6.05□□□□□ -1.44
SMAD4-202ENST00000398417 ST18O60284 1047 aa6.05□□□□□ -1.44
SMAD4-202ENST00000398417 EXOC6BQ9Y2D4 811 aa6.05□□□□□ -1.44
SMAD4-202ENST00000398417 TRHP20396 242 aaPredicted RBP6.04□□□□□ -1.44
SMAD4-202ENST00000398417 KRI1Q8N9T8 703 aaKnown RBP6.04□□□□□ -1.44
SMAD4-202ENST00000398417 PHF23Q9BUL5 403 aaPredicted RBP6.04□□□□□ -1.44
SMAD4-202ENST00000398417 RRAGDQ9NQL2 400 aaPredicted RBP6.04□□□□□ -1.44
SMAD4-202ENST00000398417 CCDC9Q9Y3X0 531 aaKnown RBP6.04□□□□□ -1.44
SMAD4-202ENST00000398417 ZNF526Q8TF50 670 aaPredicted RBP6.04□□□□□ -1.44
SMAD4-202ENST00000398417 TAOK2Q9UL54 1235 aa6.04□□□□□ -1.44
SMAD4-202ENST00000398417 TTC22Q5TAA0 569 aa6.04□□□□□ -1.44
SMAD4-202ENST00000398417 NEK4P51957 841 aa6.04□□□□□ -1.44
SMAD4-202ENST00000398417 ARHGAP45Q92619 1136 aa6.04□□□□□ -1.44
SMAD4-202ENST00000398417 BCORL1Q5H9F3 1711 aa6.04□□□□□ -1.44
SMAD4-202ENST00000398417 UHRF1BP1LA0JNW5 1464 aa6.04□□□□□ -1.44
SMAD4-202ENST00000398417 MAST1Q9Y2H9 1570 aa6.04□□□□□ -1.44
SMAD4-202ENST00000398417 SURF6O75683 361 aaKnown RBP6.03□□□□□ -1.44
SMAD4-202ENST00000398417 YTHDC2Q9H6S0 1430 aaKnown RBP6.03□□□□□ -1.44
SMAD4-202ENST00000398417 RABEP1Q15276 862 aa6.03□□□□□ -1.44
SMAD4-202ENST00000398417 BMP2KLQ5H9B9 411 aa6.03□□□□□ -1.44
SMAD4-202ENST00000398417 CAVIN1Q6NZI2 390 aaKnown RBP6.03□□□□□ -1.44
SMAD4-202ENST00000398417 LARP6Q9BRS8 491 aaKnown RBP6.03□□□□□ -1.44
SMAD4-202ENST00000398417 KCNJ4P48050 445 aa6.03□□□□□ -1.44
SMAD4-202ENST00000398417 AMOTL2Q9Y2J4 779 aa6.03□□□□□ -1.44
SMAD4-202ENST00000398417 POGZQ7Z3K3 1410 aa6.03□□□□□ -1.44
SMAD4-202ENST00000398417 TTC37Q6PGP7 1564 aa6.03□□□□□ -1.44
SMAD4-202ENST00000398417 UBTFL1P0CB47 393 aaPredicted RBP6.03□□□□□ -1.44
SMAD4-202ENST00000398417 CSB-PGBD3P0DP91 1061 aa6.03□□□□□ -1.44
SMAD4-202ENST00000398417 RNF214Q8ND24 703 aa6.03□□□□□ -1.44
SMAD4-202ENST00000398417 MPNDQ8N594 471 aa6.02□□□□□ -1.45
SMAD4-202ENST00000398417 RBM27Q9P2N5 1060 aaKnown RBP6.02□□□□□ -1.45
SMAD4-202ENST00000398417 ZNF518AQ6AHZ1 1483 aa6.02□□□□□ -1.45
SMAD4-202ENST00000398417 RIMS2Q9UQ26 1411 aa6.02□□□□□ -1.45
SMAD4-202ENST00000398417 MSNP26038 577 aaKnown RBP6.02□□□□□ -1.45
SMAD4-202ENST00000398417 XPCQ01831 940 aaPredicted RBP6.02□□□□□ -1.45
SMAD4-202ENST00000398417 AIMP1Q12904 312 aaKnown RBP6.02□□□□□ -1.45
SMAD4-202ENST00000398417 CCDC30Q5VVM6 783 aa6.02□□□□□ -1.45
SMAD4-202ENST00000398417 UBE2Q2Q8WVN8 375 aa6.02□□□□□ -1.45
SMAD4-202ENST00000398417 PPIP5K1Q6PFW1 1433 aa6.02□□□□□ -1.45
SMAD4-202ENST00000398417 ANXA1P04083 346 aa6.02□□□□□ -1.45
SMAD4-202ENST00000398417 GNAI2P04899 355 aa6.02□□□□□ -1.45
SMAD4-202ENST00000398417 ANKRD44Q8N8A2 993 aa6.02□□□□□ -1.45
SMAD4-202ENST00000398417 NUCB2P80303 420 aa6.02□□□□□ -1.45
SMAD4-202ENST00000398417 CEP85Q6P2H3 762 aa6.02□□□□□ -1.45
SMAD4-202ENST00000398417 GSPT1P15170 499 aaKnown RBP6.02□□□□□ -1.45
SMAD4-202ENST00000398417 SDSP20132 328 aa6.02□□□□□ -1.45
SMAD4-202ENST00000398417 PLEKHM2Q8IWE5 1019 aa6.02□□□□□ -1.45
SMAD4-202ENST00000398417 DDX54Q8TDD1 881 aaKnown RBP6.02□□□□□ -1.45
SMAD4-202ENST00000398417 ATP7AQ04656 1500 aa6.02□□□□□ -1.45
SMAD4-202ENST00000398417 GNAI3P08754 354 aa6.01□□□□□ -1.45
SMAD4-202ENST00000398417 SIRT2Q8IXJ6 389 aa6.01□□□□□ -1.45
SMAD4-202ENST00000398417 ERC2O15083 957 aa6.01□□□□□ -1.45
SMAD4-202ENST00000398417 DTNBO60941 627 aa6.01□□□□□ -1.45
SMAD4-202ENST00000398417 REC8O95072 547 aa6.01□□□□□ -1.45
SMAD4-202ENST00000398417 MEX3CQ5U5Q3 659 aaKnown RBP6.01□□□□□ -1.45
SMAD4-202ENST00000398417 CIZ1Q9ULV3 898 aaPredicted RBP6.01□□□□□ -1.45
SMAD4-202ENST00000398417 MYOM2P54296 1465 aa6.01□□□□□ -1.45
SMAD4-202ENST00000398417 SBNO2Q9Y2G9 1366 aa6.01□□□□□ -1.45
SMAD4-202ENST00000398417 CD2BP2O95400 341 aaKnown RBP6.01□□□□□ -1.45
SMAD4-202ENST00000398417 EYA1Q99502 592 aa6.01□□□□□ -1.45
SMAD4-202ENST00000398417 LRRCC1Q9C099 1032 aa6.01□□□□□ -1.45
SMAD4-202ENST00000398417 SRCIN1Q9C0H9 1055 aa6.01□□□□□ -1.45
SMAD4-202ENST00000398417 ANTXR1Q9H6X2 564 aa6.01□□□□□ -1.45
SMAD4-202ENST00000398417 ABCC1P33527 1531 aa6.01□□□□□ -1.45
SMAD4-202ENST00000398417 PRR36Q9H6K5 1346 aa6.01□□□□□ -1.45
SMAD4-202ENST00000398417 RBM25P49756 843 aaKnown RBP6.01□□□□□ -1.45
SMAD4-202ENST00000398417 SNX21Q969T3 373 aa6.01□□□□□ -1.45
SMAD4-202ENST00000398417 DCTPP1Q9H773 170 aa6.01□□□□□ -1.45
SMAD4-202ENST00000398417 TRPM2O94759 1503 aa6.01□□□□□ -1.45
SMAD4-202ENST00000398417 TEFQ10587 303 aa6.01□□□□□ -1.45
SMAD4-202ENST00000398417 KIAA1211Q6ZU35 1233 aa6.01□□□□□ -1.45
SMAD4-202ENST00000398417 UPF3BQ9BZI7 483 aaKnown RBP6.01□□□□□ -1.45
SMAD4-202ENST00000398417 CCT4P50991 539 aaKnown RBP6.01□□□□□ -1.45
SMAD4-202ENST00000398417 ZGPATQ8N5A5 531 aaKnown RBP6.01□□□□□ -1.45
SMAD4-202ENST00000398417 ABTB2Q8N961 1025 aa6.01□□□□□ -1.45
SMAD4-202ENST00000398417 NAP1L2Q9ULW6 460 aaPredicted RBP6.01□□□□□ -1.45
SMAD4-202ENST00000398417 PBRM1Q86U86 1689 aa6□□□□□ -1.45
SMAD4-202ENST00000398417 METP08581 1390 aa6□□□□□ -1.45
SMAD4-202ENST00000398417 APPP05067 770 aa6□□□□□ -1.45
SMAD4-202ENST00000398417 HDGFL1Q5TGJ6 251 aa6□□□□□ -1.45
SMAD4-202ENST00000398417 CHAMP1Q96JM3 812 aa6□□□□□ -1.45
SMAD4-202ENST00000398417 BAG4O95429 457 aaKnown RBP6□□□□□ -1.45
SMAD4-202ENST00000398417 DNTTIP2Q5QJE6 756 aaKnown RBP6□□□□□ -1.45
SMAD4-202ENST00000398417 WDR70Q9NW82 654 aa6□□□□□ -1.45
SMAD4-202ENST00000398417 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6□□□□□ -1.45
SMAD4-202ENST00000398417 ZNF853P0CG23 659 aa6□□□□□ -1.45
SMAD4-202ENST00000398417 ESCO1Q5FWF5 840 aa6□□□□□ -1.45
SMAD4-202ENST00000398417 MX1P20591 662 aa6□□□□□ -1.45
SMAD4-202ENST00000398417 USP26Q9BXU7 913 aa6□□□□□ -1.45
SMAD4-202ENST00000398417 PHAXQ9H814 394 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms