RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 FBXO41Q8TF61 875 aa31.45■■■□□ 2.62
TSPAN4-202ENST00000397396 ZC3H6P61129 1189 aaKnown RBP31.43■■■□□ 2.62
TSPAN4-202ENST00000397396 KIAA0232Q92628 1395 aa31.4■■■□□ 2.62
TSPAN4-202ENST00000397396 ZBTB7CA1YPR0 619 aa31.4■■■□□ 2.62
TSPAN4-202ENST00000397396 HSP90AB2PQ58FF8 381 aa31.4■■■□□ 2.62
TSPAN4-202ENST00000397396 IL13P35225 146 aa31.38■■■□□ 2.61
TSPAN4-202ENST00000397396 PRDM11Q9NQV5 511 aa31.38■■■□□ 2.61
TSPAN4-202ENST00000397396 EIF4A2Q14240 407 aaKnown RBP31.37■■■□□ 2.61
TSPAN4-202ENST00000397396 U2SURPO15042 1029 aaKnown RBP31.36■■■□□ 2.61
TSPAN4-202ENST00000397396 PNNQ9H307 717 aaKnown RBP31.36■■■□□ 2.61
TSPAN4-202ENST00000397396 U2AF1L5P0DN76 240 aaPredicted RBP31.35■■■□□ 2.61
TSPAN4-202ENST00000397396 U2AF1Q01081 240 aaKnown RBP eCLIP31.35■■■□□ 2.61
TSPAN4-202ENST00000397396 SPATA31A6Q5VVP1 1343 aa31.34■■■□□ 2.61
TSPAN4-202ENST00000397396 ADAMTS8Q9UP79 889 aa31.34■■■□□ 2.61
TSPAN4-202ENST00000397396 HSPA1LP34931 641 aa31.33■■■□□ 2.61
TSPAN4-202ENST00000397396 COL18A1P39060 1754 aa31.33■■■□□ 2.61
TSPAN4-202ENST00000397396 ILDR1Q86SU0 546 aaPredicted RBP31.32■■■□□ 2.6
TSPAN4-202ENST00000397396 LMO7Q8WWI1 1683 aa31.3■■■□□ 2.6
TSPAN4-202ENST00000397396 COL14A1Q05707 1796 aaKnown RBP31.3■■■□□ 2.6
TSPAN4-202ENST00000397396 RGPD1P0DJD0 1748 aa31.29■■■□□ 2.6
TSPAN4-202ENST00000397396 FAM208AQ9UK61 1670 aaKnown RBP31.28■■■□□ 2.6
TSPAN4-202ENST00000397396 ERBB3P21860 1342 aa31.28■■■□□ 2.6
TSPAN4-202ENST00000397396 FCHSD2O94868 740 aa31.27■■■□□ 2.6
TSPAN4-202ENST00000397396 CHRNA2Q15822 529 aa31.27■■■□□ 2.6
TSPAN4-202ENST00000397396 ANKRD24Q8TF21 1146 aa31.27■■■□□ 2.6
TSPAN4-202ENST00000397396 IGSF1Q8N6C5 1336 aa31.26■■■□□ 2.59
TSPAN4-202ENST00000397396 NEFMP07197 916 aa31.25■■■□□ 2.59
TSPAN4-202ENST00000397396 AXIN2Q9Y2T1 843 aa31.25■■■□□ 2.59
TSPAN4-202ENST00000397396 LTV1Q96GA3 475 aaPredicted RBP31.24■■■□□ 2.59
TSPAN4-202ENST00000397396 RUNDC1Q96C34 613 aa31.23■■■□□ 2.59
TSPAN4-202ENST00000397396 FAM83GA6ND36 823 aa31.22■■■□□ 2.59
TSPAN4-202ENST00000397396 NUTM2BA6NNL0 878 aaPredicted RBP31.22■■■□□ 2.59
TSPAN4-202ENST00000397396 NUTM2EB1AL46 878 aaPredicted RBP31.22■■■□□ 2.59
TSPAN4-202ENST00000397396 NUTM2AQ8IVF1 878 aaPredicted RBP31.22■■■□□ 2.59
TSPAN4-202ENST00000397396 EYA1Q99502 592 aa31.22■■■□□ 2.59
TSPAN4-202ENST00000397396 KDRP35968 1356 aa31.21■■■□□ 2.59
TSPAN4-202ENST00000397396 CAMTA1Q9Y6Y1 1673 aa31.21■■■□□ 2.59
TSPAN4-202ENST00000397396 COL5A2P05997 1499 aaPredicted RBP31.21■■■□□ 2.59
TSPAN4-202ENST00000397396 RGPD5Q99666 1765 aa31.21■■■□□ 2.59
TSPAN4-202ENST00000397396 YTHDC1Q96MU7 727 aaKnown RBP31.21■■■□□ 2.59
TSPAN4-202ENST00000397396 MAPK8IP3Q9UPT6 1336 aa31.2■■■□□ 2.59
TSPAN4-202ENST00000397396 CSB-PGBD3P0DP91 1061 aa31.2■■■□□ 2.58
TSPAN4-202ENST00000397396 RSPH6AQ9H0K4 717 aa31.2■■■□□ 2.58
TSPAN4-202ENST00000397396 HNRNPUQ00839 825 aaKnown RBP eCLIP31.19■■■□□ 2.58
TSPAN4-202ENST00000397396 SULT6B1Q6IMI4 303 aa31.19■■■□□ 2.58
TSPAN4-202ENST00000397396 NGEFQ8N5V2 710 aa31.19■■■□□ 2.58
TSPAN4-202ENST00000397396 NCAPD2Q15021 1401 aa31.18■■■□□ 2.58
TSPAN4-202ENST00000397396 ADAMTS2O95450 1211 aa31.18■■■□□ 2.58
TSPAN4-202ENST00000397396 WDR17Q8IZU2 1322 aa31.18■■■□□ 2.58
TSPAN4-202ENST00000397396 HMOX1P09601 288 aa31.17■■■□□ 2.58
TSPAN4-202ENST00000397396 PRKAR2BP31323 418 aa31.16■■■□□ 2.58
TSPAN4-202ENST00000397396 PLCH1Q4KWH8 1693 aa31.15■■■□□ 2.58
TSPAN4-202ENST00000397396 EVA1CP58658 441 aa31.15■■■□□ 2.58
TSPAN4-202ENST00000397396 CCDC146Q8IYE0 955 aa31.15■■■□□ 2.58
TSPAN4-202ENST00000397396 PLEKHF1Q96S99 279 aa31.15■■■□□ 2.58
TSPAN4-202ENST00000397396 NWD2Q9ULI1 1742 aa31.15■■■□□ 2.58
TSPAN4-202ENST00000397396 PLEKHG2Q9H7P9 1386 aa31.14■■■□□ 2.58
TSPAN4-202ENST00000397396 BTG4Q9NY30 223 aa31.14■■■□□ 2.58
TSPAN4-202ENST00000397396 NBPF6Q5VWK0 638 aa31.13■■■□□ 2.57
TSPAN4-202ENST00000397396 NBPF4Q96M43 638 aa31.13■■■□□ 2.57
TSPAN4-202ENST00000397396 NLRP2Q9NX02 1062 aa31.13■■■□□ 2.57
TSPAN4-202ENST00000397396 NCBP3Q53F19 620 aaKnown RBP31.12■■■□□ 2.57
TSPAN4-202ENST00000397396 LRP6O75581 1613 aa31.11■■■□□ 2.57
TSPAN4-202ENST00000397396 SLIT2O94813 1529 aa31.1■■■□□ 2.57
TSPAN4-202ENST00000397396 AEBP1Q8IUX7 1158 aa31.1■■■□□ 2.57
TSPAN4-202ENST00000397396 TOM1L2Q6ZVM7 507 aa31.09■■■□□ 2.57
TSPAN4-202ENST00000397396 CRB1P82279 1406 aa31.09■■■□□ 2.57
TSPAN4-202ENST00000397396 ZBED9Q6R2W3 1325 aa31.08■■■□□ 2.57
TSPAN4-202ENST00000397396 APAF1O14727 1248 aa31.08■■■□□ 2.57
TSPAN4-202ENST00000397396 MEX3CQ5U5Q3 659 aaKnown RBP31.08■■■□□ 2.57
TSPAN4-202ENST00000397396 RGPD2P0DJD1 1756 aa31.08■■■□□ 2.57
TSPAN4-202ENST00000397396 TCP11L2Q8N4U5 519 aa31.07■■■□□ 2.56
TSPAN4-202ENST00000397396 CARD10Q9BWT7 1032 aa31.07■■■□□ 2.56
TSPAN4-202ENST00000397396 STRN4Q9NRL3 753 aa31.07■■■□□ 2.56
TSPAN4-202ENST00000397396 NRAPQ86VF7 1730 aa31.06■■■□□ 2.56
TSPAN4-202ENST00000397396 USHBP1Q8N6Y0 703 aa31.05■■■□□ 2.56
TSPAN4-202ENST00000397396 NGLY1Q96IV0 654 aa31.04■■■□□ 2.56
TSPAN4-202ENST00000397396 C8orf37Q96NL8 207 aa31.04■■■□□ 2.56
TSPAN4-202ENST00000397396 RAPGEF4Q8WZA2 1011 aa31.03■■■□□ 2.56
TSPAN4-202ENST00000397396 LARP1Q6PKG0 1096 aaKnown RBP31.02■■■□□ 2.56
TSPAN4-202ENST00000397396 FNBP4Q8N3X1 1017 aaPredicted RBP31.01■■■□□ 2.56
TSPAN4-202ENST00000397396 GAS2L2Q8NHY3 880 aa31.01■■■□□ 2.56
TSPAN4-202ENST00000397396 NFE2L2Q16236 605 aa31■■■□□ 2.55
TSPAN4-202ENST00000397396 AMOTQ4VCS5 1084 aa31■■■□□ 2.55
TSPAN4-202ENST00000397396 TATP17735 454 aaPredicted RBP30.99■■■□□ 2.55
TSPAN4-202ENST00000397396 TMPOP42166 694 aaKnown RBP30.99■■■□□ 2.55
TSPAN4-202ENST00000397396 LMOD3Q0VAK6 560 aa30.99■■■□□ 2.55
TSPAN4-202ENST00000397396 CCDC27Q2M243 656 aa30.99■■■□□ 2.55
TSPAN4-202ENST00000397396 UNC5CLQ8IV45 518 aa30.99■■■□□ 2.55
TSPAN4-202ENST00000397396 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.99■■■□□ 2.55
TSPAN4-202ENST00000397396 PHACTR3Q96KR7 559 aa30.98■■■□□ 2.55
TSPAN4-202ENST00000397396 PARP4Q9UKK3 1724 aaKnown RBP30.97■■■□□ 2.55
TSPAN4-202ENST00000397396 PLEKHO1Q53GL0 409 aaPredicted RBP30.97■■■□□ 2.55
TSPAN4-202ENST00000397396 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.96■■■□□ 2.55
TSPAN4-202ENST00000397396 THRAP3Q9Y2W1 955 aaKnown RBP30.96■■■□□ 2.55
TSPAN4-202ENST00000397396 RIPK4P57078 832 aa30.94■■■□□ 2.54
TSPAN4-202ENST00000397396 PDE3BQ13370 1112 aa30.94■■■□□ 2.54
TSPAN4-202ENST00000397396 BCL9LQ86UU0 1499 aa30.93■■■□□ 2.54
TSPAN4-202ENST00000397396 IL2RBP14784 551 aa30.93■■■□□ 2.54
TSPAN4-202ENST00000397396 NEUROD2Q15784 382 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms