RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 KCNH5Q8NCM2 988 aa14.63□□□□□ -0.07
NUP98-205ENST00000397007 TNS1Q9HBL0 1735 aaKnown RBP14.63□□□□□ -0.07
NUP98-205ENST00000397007 POLKQ9UBT6 870 aa14.63□□□□□ -0.07
NUP98-205ENST00000397007 MAP3K19Q56UN5 1328 aa14.63□□□□□ -0.07
NUP98-205ENST00000397007 SCN11AQ9UI33 1791 aa14.62□□□□□ -0.07
NUP98-205ENST00000397007 AXIN2Q9Y2T1 843 aa14.62□□□□□ -0.07
NUP98-205ENST00000397007 KDRP35968 1356 aa14.62□□□□□ -0.07
NUP98-205ENST00000397007 GGNBP2Q9H3C7 697 aa14.61□□□□□ -0.07
NUP98-205ENST00000397007 FLT4P35916 1363 aa14.61□□□□□ -0.07
NUP98-205ENST00000397007 CABLES1Q8TDN4 633 aa14.61□□□□□ -0.07
NUP98-205ENST00000397007 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.6□□□□□ -0.07
NUP98-205ENST00000397007 ZNF831Q5JPB2 1677 aa14.6□□□□□ -0.07
NUP98-205ENST00000397007 ONECUT3O60422 494 aaPredicted RBP14.6□□□□□ -0.07
NUP98-205ENST00000397007 NLRP6P59044 892 aa14.6□□□□□ -0.07
NUP98-205ENST00000397007 NHSQ6T4R5 1651 aa14.59□□□□□ -0.07
NUP98-205ENST00000397007 CRB1P82279 1406 aa14.59□□□□□ -0.07
NUP98-205ENST00000397007 IP6K1Q92551 441 aa14.59□□□□□ -0.07
NUP98-205ENST00000397007 BCL9O00512 1426 aa14.58□□□□□ -0.07
NUP98-205ENST00000397007 HOXC9P31274 260 aa14.58□□□□□ -0.08
NUP98-205ENST00000397007 ITGB4P16144 1822 aa14.58□□□□□ -0.08
NUP98-205ENST00000397007 ERBB3P21860 1342 aa14.58□□□□□ -0.08
NUP98-205ENST00000397007 COG3Q96JB2 828 aa14.58□□□□□ -0.08
NUP98-205ENST00000397007 PRKRIP1Q9H875 184 aaPredicted RBP14.57□□□□□ -0.08
NUP98-205ENST00000397007 UBR2Q8IWV8 1755 aa14.57□□□□□ -0.08
NUP98-205ENST00000397007 KNSTRNQ9Y448 316 aa14.56□□□□□ -0.08
NUP98-205ENST00000397007 FBLN1P23142 703 aa14.55□□□□□ -0.08
NUP98-205ENST00000397007 PPP2R1AP30153 589 aa14.55□□□□□ -0.08
NUP98-205ENST00000397007 DDX10Q13206 875 aaKnown RBP14.55□□□□□ -0.08
NUP98-205ENST00000397007 EP400Q96L91 3159 aa14.55□□□□□ -0.08
NUP98-205ENST00000397007 SPATA31A5Q5VU36 1347 aa14.55□□□□□ -0.08
NUP98-205ENST00000397007 SPATA31A7Q8IWB4 1347 aa14.55□□□□□ -0.08
NUP98-205ENST00000397007 NUTM2GQ5VZR2 741 aa14.55□□□□□ -0.08
NUP98-205ENST00000397007 MEGF6O75095 1541 aa14.55□□□□□ -0.08
NUP98-205ENST00000397007 WDR17Q8IZU2 1322 aa14.55□□□□□ -0.08
NUP98-205ENST00000397007 DOT1LQ8TEK3 1739 aa14.54□□□□□ -0.08
NUP98-205ENST00000397007 RALBP1Q15311 655 aa14.54□□□□□ -0.08
NUP98-205ENST00000397007 VPS72Q15906 364 aa14.54□□□□□ -0.08
NUP98-205ENST00000397007 IGSF1Q8N6C5 1336 aa14.54□□□□□ -0.08
NUP98-205ENST00000397007 LY75O60449 1722 aa14.54□□□□□ -0.08
NUP98-205ENST00000397007 MRC1P22897 1456 aa14.54□□□□□ -0.08
NUP98-205ENST00000397007 OVOS2A0A0G2JMS6 1433 aa14.54□□□□□ -0.08
NUP98-205ENST00000397007 PAK3O75914 559 aaPredicted RBP14.54□□□□□ -0.08
NUP98-205ENST00000397007 RGS12O14924 1447 aa14.53□□□□□ -0.08
NUP98-205ENST00000397007 IL13P35225 146 aa14.53□□□□□ -0.08
NUP98-205ENST00000397007 EMILIN1Q9Y6C2 1016 aa14.53□□□□□ -0.08
NUP98-205ENST00000397007 RREB1Q92766 1687 aa14.53□□□□□ -0.08
NUP98-205ENST00000397007 SPATA31A1Q5TZJ5 1347 aa14.53□□□□□ -0.08
NUP98-205ENST00000397007 UNC5CLQ8IV45 518 aa14.52□□□□□ -0.09
NUP98-205ENST00000397007 KDM3BQ7LBC6 1761 aa14.52□□□□□ -0.09
NUP98-205ENST00000397007 AFF2P51816 1311 aa14.51□□□□□ -0.09
NUP98-205ENST00000397007 MYBBP1AQ9BQG0 1328 aaKnown RBP14.51□□□□□ -0.09
NUP98-205ENST00000397007 TNS2Q63HR2 1409 aa14.51□□□□□ -0.09
NUP98-205ENST00000397007 BARGINQ6ZT62 677 aa14.51□□□□□ -0.09
NUP98-205ENST00000397007 RRS1Q15050 365 aaKnown RBP14.5□□□□□ -0.09
NUP98-205ENST00000397007 EIF4A2Q14240 407 aaKnown RBP14.48□□□□□ -0.09
NUP98-205ENST00000397007 HSP90AB2PQ58FF8 381 aa14.48□□□□□ -0.09
NUP98-205ENST00000397007 CARD10Q9BWT7 1032 aa14.48□□□□□ -0.09
NUP98-205ENST00000397007 THRAP3Q9Y2W1 955 aaKnown RBP14.48□□□□□ -0.09
NUP98-205ENST00000397007 CC2D1BQ5T0F9 858 aaKnown RBP14.47□□□□□ -0.09
NUP98-205ENST00000397007 MORC1Q86VD1 984 aa14.47□□□□□ -0.09
NUP98-205ENST00000397007 QSER1Q2KHR3 1735 aa14.47□□□□□ -0.09
NUP98-205ENST00000397007 ZC3H6P61129 1189 aaKnown RBP14.47□□□□□ -0.09
NUP98-205ENST00000397007 BTAF1O14981 1849 aa14.47□□□□□ -0.09
NUP98-205ENST00000397007 BTG4Q9NY30 223 aa14.46□□□□□ -0.09
NUP98-205ENST00000397007 COL5A3P25940 1745 aaPredicted RBP14.46□□□□□ -0.09
NUP98-205ENST00000397007 POTEAQ6S8J7 498 aa14.46□□□□□ -0.09
NUP98-205ENST00000397007 MTHFSP49914 203 aa14.46□□□□□ -0.1
NUP98-205ENST00000397007 CHRNA2Q15822 529 aa14.46□□□□□ -0.1
NUP98-205ENST00000397007 TAF1LQ8IZX4 1826 aa14.46□□□□□ -0.1
NUP98-205ENST00000397007 COL24A1Q17RW2 1714 aa14.45□□□□□ -0.1
NUP98-205ENST00000397007 LARP1Q6PKG0 1096 aaKnown RBP14.45□□□□□ -0.1
NUP98-205ENST00000397007 PLEKHF1Q96S99 279 aa14.45□□□□□ -0.1
NUP98-205ENST00000397007 NBPF6Q5VWK0 638 aa14.44□□□□□ -0.1
NUP98-205ENST00000397007 NBPF4Q96M43 638 aa14.44□□□□□ -0.1
NUP98-205ENST00000397007 ANKRD24Q8TF21 1146 aa14.44□□□□□ -0.1
NUP98-205ENST00000397007 PRDM11Q9NQV5 511 aa14.44□□□□□ -0.1
NUP98-205ENST00000397007 CCDC184Q52MB2 194 aa14.43□□□□□ -0.1
NUP98-205ENST00000397007 ZNF772Q68DY9 489 aaPredicted RBP14.43□□□□□ -0.1
NUP98-205ENST00000397007 ADAMTS2O95450 1211 aa14.43□□□□□ -0.1
NUP98-205ENST00000397007 GJD4Q96KN9 370 aaPredicted RBP14.43□□□□□ -0.1
NUP98-205ENST00000397007 EYA1Q99502 592 aa14.43□□□□□ -0.1
NUP98-205ENST00000397007 POLR3GLQ9BT43 218 aa14.43□□□□□ -0.1
NUP98-205ENST00000397007 USP21Q9UK80 565 aa14.43□□□□□ -0.1
NUP98-205ENST00000397007 TJP1Q07157 1748 aa14.42□□□□□ -0.1
NUP98-205ENST00000397007 NUP188Q5SRE5 1749 aa14.42□□□□□ -0.1
NUP98-205ENST00000397007 C8orf37Q96NL8 207 aa14.42□□□□□ -0.1
NUP98-205ENST00000397007 NUTM2BA6NNL0 878 aaPredicted RBP14.41□□□□□ -0.1
NUP98-205ENST00000397007 NUTM2EB1AL46 878 aaPredicted RBP14.41□□□□□ -0.1
NUP98-205ENST00000397007 NUTM2AQ8IVF1 878 aaPredicted RBP14.41□□□□□ -0.1
NUP98-205ENST00000397007 TRPC5Q9UL62 973 aaPredicted RBP14.41□□□□□ -0.1
NUP98-205ENST00000397007 RSPH6AQ9H0K4 717 aa14.4□□□□□ -0.1
NUP98-205ENST00000397007 LAMB4A4D0S4 1761 aa14.4□□□□□ -0.1
NUP98-205ENST00000397007 TUBGCP6Q96RT7 1819 aa14.4□□□□□ -0.11
NUP98-205ENST00000397007 LMOD2Q6P5Q4 547 aa14.39□□□□□ -0.11
NUP98-205ENST00000397007 KDM6AO15550 1401 aaPredicted RBP14.38□□□□□ -0.11
NUP98-205ENST00000397007 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.38□□□□□ -0.118e-7■■■□□ 17.1
NUP98-205ENST00000397007 CCER2I3L3R5 266 aa14.38□□□□□ -0.11
NUP98-205ENST00000397007 PNISRQ8TF01 805 aaKnown RBP14.38□□□□□ -0.11
NUP98-205ENST00000397007 C5P01031 1676 aa14.37□□□□□ -0.11
NUP98-205ENST00000397007 NKX1-1Q15270 411 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms