RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 ATRNO75882 1429 aa26.21■■□□□ 1.79
HOXA9-202ENST00000396345 MAP3K19Q56UN5 1328 aa26.2■■□□□ 1.79
HOXA9-202ENST00000396345 EVA1CP58658 441 aa26.2■■□□□ 1.78
HOXA9-202ENST00000396345 RRS1Q15050 365 aaKnown RBP26.2■■□□□ 1.78
HOXA9-202ENST00000396345 STRN4Q9NRL3 753 aa26.2■■□□□ 1.78
HOXA9-202ENST00000396345 AXIN2Q9Y2T1 843 aa26.2■■□□□ 1.78
HOXA9-202ENST00000396345 ABCC6O95255 1503 aa26.19■■□□□ 1.78
HOXA9-202ENST00000396345 TNNT2P45379 298 aaPredicted RBP26.19■■□□□ 1.78
HOXA9-202ENST00000396345 CC2D1BQ5T0F9 858 aaKnown RBP26.19■■□□□ 1.78
HOXA9-202ENST00000396345 NPC1L1Q9UHC9 1359 aa26.19■■□□□ 1.78
HOXA9-202ENST00000396345 AMPHP49418 695 aa26.18■■□□□ 1.78
HOXA9-202ENST00000396345 VPS72Q15906 364 aa26.18■■□□□ 1.78
HOXA9-202ENST00000396345 RGPD5Q99666 1765 aa26.18■■□□□ 1.78
HOXA9-202ENST00000396345 IP6K1Q92551 441 aa26.17■■□□□ 1.78
HOXA9-202ENST00000396345 CCDC9Q9Y3X0 531 aaKnown RBP26.17■■□□□ 1.78
HOXA9-202ENST00000396345 COL5A2P05997 1499 aaPredicted RBP26.17■■□□□ 1.78
HOXA9-202ENST00000396345 RXRBP28702 533 aa26.16■■□□□ 1.78
HOXA9-202ENST00000396345 CNGB1Q14028 1251 aaPredicted RBP26.16■■□□□ 1.78
HOXA9-202ENST00000396345 RBM6P78332 1123 aaKnown RBP26.15■■□□□ 1.78
HOXA9-202ENST00000396345 MAP2P11137 1827 aaKnown RBP26.14■■□□□ 1.78
HOXA9-202ENST00000396345 GJD4Q96KN9 370 aaPredicted RBP26.14■■□□□ 1.78
HOXA9-202ENST00000396345 RTL1A6NKG5 1358 aa26.14■■□□□ 1.78
HOXA9-202ENST00000396345 HOXC9P31274 260 aa26.13■■□□□ 1.77
HOXA9-202ENST00000396345 EMILIN1Q9Y6C2 1016 aa26.13■■□□□ 1.77
HOXA9-202ENST00000396345 LARP1Q6PKG0 1096 aaKnown RBP26.12■■□□□ 1.77
HOXA9-202ENST00000396345 BLMP54132 1417 aaPredicted RBP26.12■■□□□ 1.77
HOXA9-202ENST00000396345 KIF24Q5T7B8 1368 aa26.11■■□□□ 1.77
HOXA9-202ENST00000396345 PPM1GO15355 546 aaPredicted RBP26.11■■□□□ 1.77
HOXA9-202ENST00000396345 CSB-PGBD3P0DP91 1061 aa26.11■■□□□ 1.77
HOXA9-202ENST00000396345 POLKQ9UBT6 870 aa26.11■■□□□ 1.77
HOXA9-202ENST00000396345 SPATA31A5Q5VU36 1347 aa26.11■■□□□ 1.77
HOXA9-202ENST00000396345 SPATA31A7Q8IWB4 1347 aa26.11■■□□□ 1.77
HOXA9-202ENST00000396345 PEAK1Q9H792 1746 aa26.1■■□□□ 1.77
HOXA9-202ENST00000396345 WDR17Q8IZU2 1322 aa26.1■■□□□ 1.77
HOXA9-202ENST00000396345 FLT4P35916 1363 aa26.09■■□□□ 1.77
HOXA9-202ENST00000396345 ANKRD24Q8TF21 1146 aa26.09■■□□□ 1.77
HOXA9-202ENST00000396345 GLI3P10071 1580 aa26.08■■□□□ 1.77
HOXA9-202ENST00000396345 TOM1L2Q6ZVM7 507 aa26.08■■□□□ 1.77
HOXA9-202ENST00000396345 ERBB3P21860 1342 aa26.08■■□□□ 1.77
HOXA9-202ENST00000396345 SPATA31A1Q5TZJ5 1347 aa26.08■■□□□ 1.77
HOXA9-202ENST00000396345 CRB1P82279 1406 aa26.07■■□□□ 1.76
HOXA9-202ENST00000396345 LTV1Q96GA3 475 aaPredicted RBP26.07■■□□□ 1.76
HOXA9-202ENST00000396345 HSP90AB2PQ58FF8 381 aa26.06■■□□□ 1.76
HOXA9-202ENST00000396345 USP35Q9P2H5 1018 aa26.06■■□□□ 1.76
HOXA9-202ENST00000396345 INSRP06213 1382 aa26.05■■□□□ 1.76
HOXA9-202ENST00000396345 SMG6Q86US8 1419 aaKnown RBP26.03■■□□□ 1.76
HOXA9-202ENST00000396345 CDK12Q9NYV4 1490 aaPredicted RBP26.03■■□□□ 1.76
HOXA9-202ENST00000396345 FAM98CQ17RN3 349 aaKnown RBP26.02■■□□□ 1.76
HOXA9-202ENST00000396345 TCP11L2Q8N4U5 519 aa26.02■■□□□ 1.76
HOXA9-202ENST00000396345 CARD10Q9BWT7 1032 aa26.02■■□□□ 1.76
HOXA9-202ENST00000396345 NLRP2Q9NX02 1062 aa26.02■■□□□ 1.76
HOXA9-202ENST00000396345 THRAP3Q9Y2W1 955 aaKnown RBP26■■□□□ 1.75
HOXA9-202ENST00000396345 FAM208AQ9UK61 1670 aaKnown RBP25.99■■□□□ 1.75
HOXA9-202ENST00000396345 RGS12O14924 1447 aa25.99■■□□□ 1.75
HOXA9-202ENST00000396345 ONECUT3O60422 494 aaPredicted RBP25.99■■□□□ 1.75
HOXA9-202ENST00000396345 MTHFSP49914 203 aa25.99■■□□□ 1.75
HOXA9-202ENST00000396345 BARGINQ6ZT62 677 aa25.98■■□□□ 1.75
HOXA9-202ENST00000396345 A0A0G2JS52 829 aa25.97■■□□□ 1.75
HOXA9-202ENST00000396345 MYT1Q01538 1121 aa25.97■■□□□ 1.75
HOXA9-202ENST00000396345 SEPT12Q8IYM1 358 aa25.97■■□□□ 1.75
HOXA9-202ENST00000396345 PARD3Q8TEW0 1356 aa25.96■■□□□ 1.75
HOXA9-202ENST00000396345 RGPD2P0DJD1 1756 aa25.95■■□□□ 1.75
HOXA9-202ENST00000396345 PPP2R1AP30153 589 aa25.95■■□□□ 1.74
HOXA9-202ENST00000396345 EIF4A2Q14240 407 aaKnown RBP25.94■■□□□ 1.74
HOXA9-202ENST00000396345 RALBP1Q15311 655 aa25.94■■□□□ 1.74
HOXA9-202ENST00000396345 NBPF6Q5VWK0 638 aa25.94■■□□□ 1.74
HOXA9-202ENST00000396345 NBPF4Q96M43 638 aa25.94■■□□□ 1.74
HOXA9-202ENST00000396345 THSD7AQ9UPZ6 1657 aa25.93■■□□□ 1.74
HOXA9-202ENST00000396345 CDCA7Q9BWT1 371 aaPredicted RBP25.9■■□□□ 1.74
HOXA9-202ENST00000396345 WNK3Q9BYP7 1800 aa25.9■■□□□ 1.74
HOXA9-202ENST00000396345 USHBP1Q8N6Y0 703 aa25.89■■□□□ 1.74
HOXA9-202ENST00000396345 BRWD3Q6RI45 1802 aa25.88■■□□□ 1.73
HOXA9-202ENST00000396345 EYA1Q99502 592 aa25.88■■□□□ 1.73
HOXA9-202ENST00000396345 DISP2A7MBM2 1401 aa25.88■■□□□ 1.73
HOXA9-202ENST00000396345 IL2RBP14784 551 aa25.87■■□□□ 1.73
HOXA9-202ENST00000396345 PARP4Q9UKK3 1724 aaKnown RBP25.86■■□□□ 1.73
HOXA9-202ENST00000396345 IL13P35225 146 aa25.86■■□□□ 1.73
HOXA9-202ENST00000396345 CFAP53Q96M91 514 aa25.86■■□□□ 1.73
HOXA9-202ENST00000396345 DIAPH1O60610 1272 aaKnown RBP25.85■■□□□ 1.73
HOXA9-202ENST00000396345 PRKRIP1Q9H875 184 aaPredicted RBP25.85■■□□□ 1.73
HOXA9-202ENST00000396345 KRT27Q7Z3Y8 459 aa25.84■■□□□ 1.73
HOXA9-202ENST00000396345 UPF1Q92900 1129 aaKnown RBP eCLIP25.84■■□□□ 1.73
HOXA9-202ENST00000396345 PDE3BQ13370 1112 aa25.83■■□□□ 1.73
HOXA9-202ENST00000396345 DDB1Q16531 1140 aa25.83■■□□□ 1.73
HOXA9-202ENST00000396345 COL3A1P02461 1466 aaPredicted RBP25.83■■□□□ 1.73
HOXA9-202ENST00000396345 IGSF1Q8N6C5 1336 aa25.83■■□□□ 1.73
HOXA9-202ENST00000396345 NCAPD2Q15021 1401 aa25.82■■□□□ 1.72
HOXA9-202ENST00000396345 MYBBP1AQ9BQG0 1328 aaKnown RBP25.82■■□□□ 1.72
HOXA9-202ENST00000396345 LRRC37A3O60309 1634 aa25.81■■□□□ 1.72
HOXA9-202ENST00000396345 EXOC5O00471 708 aa25.81■■□□□ 1.72
HOXA9-202ENST00000396345 RAPGEF4Q8WZA2 1011 aa25.81■■□□□ 1.72
HOXA9-202ENST00000396345 MEGF6O75095 1541 aa25.79■■□□□ 1.72
HOXA9-202ENST00000396345 TATP17735 454 aaPredicted RBP25.79■■□□□ 1.72
HOXA9-202ENST00000396345 RGPD1P0DJD0 1748 aa25.79■■□□□ 1.72
HOXA9-202ENST00000396345 ANP32CO43423 234 aa25.77■■□□□ 1.72
HOXA9-202ENST00000396345 TNS2Q63HR2 1409 aa25.77■■□□□ 1.72
HOXA9-202ENST00000396345 OVOS2A0A0G2JMS6 1433 aa25.76■■□□□ 1.71
HOXA9-202ENST00000396345 U2SURPO15042 1029 aaKnown RBP25.75■■□□□ 1.71
HOXA9-202ENST00000396345 FAM182BQ5T319 152 aa25.75■■□□□ 1.71
HOXA9-202ENST00000396345 SULT6B1Q6IMI4 303 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms