RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 SALL2Q9Y467 1007 aaPredicted RBP27.04■■□□□ 1.92
VCPKMT-202ENST00000395860 RGPD1P0DJD0 1748 aa27.02■■□□□ 1.92
VCPKMT-202ENST00000395860 ARHGEF25Q86VW2 580 aa27.02■■□□□ 1.92
VCPKMT-202ENST00000395860 CABLES1Q8TDN4 633 aa27.02■■□□□ 1.92
VCPKMT-202ENST00000395860 PNNQ9H307 717 aaKnown RBP27.02■■□□□ 1.92
VCPKMT-202ENST00000395860 PHLPP1O60346 1717 aa27.02■■□□□ 1.92
VCPKMT-202ENST00000395860 APAF1O14727 1248 aa27.02■■□□□ 1.92
VCPKMT-202ENST00000395860 IP6K1Q92551 441 aa27.02■■□□□ 1.92
VCPKMT-202ENST00000395860 UBAP1LF5GYI3 381 aa27.01■■□□□ 1.91
VCPKMT-202ENST00000395860 ABCA3Q99758 1704 aa27.01■■□□□ 1.91
VCPKMT-202ENST00000395860 FCHSD2O94868 740 aa27■■□□□ 1.91
VCPKMT-202ENST00000395860 PIP4K2BP78356 416 aa27■■□□□ 1.91
VCPKMT-202ENST00000395860 HMOX1P09601 288 aa26.99■■□□□ 1.91
VCPKMT-202ENST00000395860 ZC3H6P61129 1189 aaKnown RBP26.99■■□□□ 1.91
VCPKMT-202ENST00000395860 CERKQ8TCT0 537 aa26.99■■□□□ 1.91
VCPKMT-202ENST00000395860 RGPD5Q99666 1765 aa26.98■■□□□ 1.91
VCPKMT-202ENST00000395860 LRRC59Q96AG4 307 aaKnown RBP26.98■■□□□ 1.91
VCPKMT-202ENST00000395860 PLEKHF1Q96S99 279 aa26.98■■□□□ 1.91
VCPKMT-202ENST00000395860 RSPH6AQ9H0K4 717 aa26.97■■□□□ 1.91
VCPKMT-202ENST00000395860 MAPK8IP3Q9UPT6 1336 aa26.97■■□□□ 1.91
VCPKMT-202ENST00000395860 TCP11L2Q8N4U5 519 aa26.96■■□□□ 1.91
VCPKMT-202ENST00000395860 NEFMP07197 916 aa26.95■■□□□ 1.9
VCPKMT-202ENST00000395860 PRKAR2BP31323 418 aa26.95■■□□□ 1.9
VCPKMT-202ENST00000395860 LTV1Q96GA3 475 aaPredicted RBP26.95■■□□□ 1.9
VCPKMT-202ENST00000395860 HAP1P54257 671 aaPredicted RBP26.94■■□□□ 1.9
VCPKMT-202ENST00000395860 NGEFQ8N5V2 710 aa26.94■■□□□ 1.9
VCPKMT-202ENST00000395860 COL16A1Q07092 1604 aaPredicted RBP26.94■■□□□ 1.9
VCPKMT-202ENST00000395860 SULT6B1Q6IMI4 303 aa26.93■■□□□ 1.9
VCPKMT-202ENST00000395860 COL18A1P39060 1754 aa26.93■■□□□ 1.9
VCPKMT-202ENST00000395860 RGPD2P0DJD1 1756 aa26.91■■□□□ 1.9
VCPKMT-202ENST00000395860 COL22A1Q8NFW1 1626 aaPredicted RBP26.91■■□□□ 1.9
VCPKMT-202ENST00000395860 ABCC6O95255 1503 aa26.91■■□□□ 1.9
VCPKMT-202ENST00000395860 CPDO75976 1380 aa26.91■■□□□ 1.9
VCPKMT-202ENST00000395860 IGSF1Q8N6C5 1336 aa26.91■■□□□ 1.9
VCPKMT-202ENST00000395860 NEUROD2Q15784 382 aa26.91■■□□□ 1.9
VCPKMT-202ENST00000395860 EYA1Q99502 592 aa26.91■■□□□ 1.9
VCPKMT-202ENST00000395860 KIAA0232Q92628 1395 aa26.9■■□□□ 1.9
VCPKMT-202ENST00000395860 AEBP1Q8IUX7 1158 aa26.9■■□□□ 1.9
VCPKMT-202ENST00000395860 RRP7AQ9Y3A4 280 aaKnown RBP26.9■■□□□ 1.9
VCPKMT-202ENST00000395860 PDE3BQ13370 1112 aa26.89■■□□□ 1.9
VCPKMT-202ENST00000395860 AXIN2Q9Y2T1 843 aa26.88■■□□□ 1.89
VCPKMT-202ENST00000395860 ANKRD24Q8TF21 1146 aa26.86■■□□□ 1.89
VCPKMT-202ENST00000395860 ZNF521Q96K83 1311 aa26.86■■□□□ 1.89
VCPKMT-202ENST00000395860 TMPOP42166 694 aaKnown RBP26.86■■□□□ 1.89
VCPKMT-202ENST00000395860 CHRNA2Q15822 529 aa26.86■■□□□ 1.89
VCPKMT-202ENST00000395860 NCBP3Q53F19 620 aaKnown RBP26.86■■□□□ 1.89
VCPKMT-202ENST00000395860 KDRP35968 1356 aa26.86■■□□□ 1.89
VCPKMT-202ENST00000395860 PHACTR3Q96KR7 559 aa26.85■■□□□ 1.89
VCPKMT-202ENST00000395860 PRDM11Q9NQV5 511 aa26.84■■□□□ 1.89
VCPKMT-202ENST00000395860 DLG5Q8TDM6 1919 aa26.84■■□□□ 1.89
VCPKMT-202ENST00000395860 FAM208AQ9UK61 1670 aaKnown RBP26.83■■□□□ 1.89
VCPKMT-202ENST00000395860 CCDC27Q2M243 656 aa26.83■■□□□ 1.89
VCPKMT-202ENST00000395860 WWC1Q8IX03 1113 aa26.83■■□□□ 1.89
VCPKMT-202ENST00000395860 ERBB3P21860 1342 aa26.82■■□□□ 1.88
VCPKMT-202ENST00000395860 GOLGA2Q08379 1002 aa26.81■■□□□ 1.88
VCPKMT-202ENST00000395860 NBPF6Q5VWK0 638 aa26.81■■□□□ 1.88
VCPKMT-202ENST00000395860 NBPF4Q96M43 638 aa26.81■■□□□ 1.88
VCPKMT-202ENST00000395860 LMO7Q8WWI1 1683 aa26.81■■□□□ 1.88
VCPKMT-202ENST00000395860 CAMTA1Q9Y6Y1 1673 aa26.81■■□□□ 1.88
VCPKMT-202ENST00000395860 RIPK4P57078 832 aa26.81■■□□□ 1.88
VCPKMT-202ENST00000395860 CDCA7LQ96GN5 454 aa26.81■■□□□ 1.88
VCPKMT-202ENST00000395860 NFE2L2Q16236 605 aa26.8■■□□□ 1.88
VCPKMT-202ENST00000395860 USHBP1Q8N6Y0 703 aa26.8■■□□□ 1.88
VCPKMT-202ENST00000395860 PHF23Q9BUL5 403 aaPredicted RBP26.8■■□□□ 1.88
VCPKMT-202ENST00000395860 CSB-PGBD3P0DP91 1061 aa26.76■■□□□ 1.87
VCPKMT-202ENST00000395860 TRIM35Q9UPQ4 493 aa26.76■■□□□ 1.87
VCPKMT-202ENST00000395860 WDR63Q8IWG1 891 aa26.75■■□□□ 1.87
VCPKMT-202ENST00000395860 NCAPD2Q15021 1401 aa26.75■■□□□ 1.87
VCPKMT-202ENST00000395860 COL14A1Q05707 1796 aaKnown RBP26.75■■□□□ 1.87
VCPKMT-202ENST00000395860 NLRP2Q9NX02 1062 aa26.73■■□□□ 1.87
VCPKMT-202ENST00000395860 FAM83GA6ND36 823 aa26.72■■□□□ 1.87
VCPKMT-202ENST00000395860 SLFN5Q08AF3 891 aa26.72■■□□□ 1.87
VCPKMT-202ENST00000395860 COL5A2P05997 1499 aaPredicted RBP26.72■■□□□ 1.87
VCPKMT-202ENST00000395860 E9PSI1 815 aa26.71■■□□□ 1.87
VCPKMT-202ENST00000395860 LMOD3Q0VAK6 560 aa26.71■■□□□ 1.87
VCPKMT-202ENST00000395860 MTHFSDQ2M296 383 aaKnown RBP26.7■■□□□ 1.86
VCPKMT-202ENST00000395860 GAS2L2Q8NHY3 880 aa26.69■■□□□ 1.86
VCPKMT-202ENST00000395860 SPINK5Q9NQ38 1064 aaPredicted RBP26.69■■□□□ 1.86
VCPKMT-202ENST00000395860 JCADQ9P266 1359 aa26.68■■□□□ 1.86
VCPKMT-202ENST00000395860 WDR17Q8IZU2 1322 aa26.68■■□□□ 1.86
VCPKMT-202ENST00000395860 DUSP27Q5VZP5 1158 aa26.68■■□□□ 1.86
VCPKMT-202ENST00000395860 NUTM2BA6NNL0 878 aaPredicted RBP26.66■■□□□ 1.86
VCPKMT-202ENST00000395860 NUTM2EB1AL46 878 aaPredicted RBP26.66■■□□□ 1.86
VCPKMT-202ENST00000395860 EVA1CP58658 441 aa26.66■■□□□ 1.86
VCPKMT-202ENST00000395860 NUTM2AQ8IVF1 878 aaPredicted RBP26.66■■□□□ 1.86
VCPKMT-202ENST00000395860 TRMT2AQ8IZ69 625 aaKnown RBP26.66■■□□□ 1.86
VCPKMT-202ENST00000395860 PLCH1Q4KWH8 1693 aa26.66■■□□□ 1.86
VCPKMT-202ENST00000395860 TOM1L2Q6ZVM7 507 aa26.65■■□□□ 1.86
VCPKMT-202ENST00000395860 STRN4Q9NRL3 753 aa26.65■■□□□ 1.86
VCPKMT-202ENST00000395860 ADAMTS2O95450 1211 aa26.64■■□□□ 1.86
VCPKMT-202ENST00000395860 BTG4Q9NY30 223 aa26.64■■□□□ 1.86
VCPKMT-202ENST00000395860 IL16Q14005 1332 aa26.64■■□□□ 1.86
VCPKMT-202ENST00000395860 CALD1Q05682 793 aaKnown RBP26.63■■□□□ 1.85
VCPKMT-202ENST00000395860 RAPGEF4Q8WZA2 1011 aa26.63■■□□□ 1.85
VCPKMT-202ENST00000395860 PLEKHO1Q53GL0 409 aaPredicted RBP26.62■■□□□ 1.85
VCPKMT-202ENST00000395860 MYH16Q9H6N6 1097 aa26.62■■□□□ 1.85
VCPKMT-202ENST00000395860 THUMPD2Q9BTF0 503 aaKnown RBP26.61■■□□□ 1.85
VCPKMT-202ENST00000395860 AMOTQ4VCS5 1084 aa26.61■■□□□ 1.85
VCPKMT-202ENST00000395860 RTF1Q92541 710 aaKnown RBP26.61■■□□□ 1.85
VCPKMT-202ENST00000395860 HSPA1LP34931 641 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms