RNA–Protein interactions for RNA: ENST00000395841.6

RAE1-203, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-203ENST00000395841 ZNF428Q96B54 188 aa14.39□□□□□ -0.11
RAE1-203ENST00000395841 NOB1Q9ULX3 412 aaKnown RBP14.39□□□□□ -0.11
RAE1-203ENST00000395841 IPO8O15397 1037 aaKnown RBP14.38□□□□□ -0.11
RAE1-203ENST00000395841 DDX19BQ9UMR2 479 aa14.38□□□□□ -0.11
RAE1-203ENST00000395841 SOX12O15370 315 aa14.37□□□□□ -0.11
RAE1-203ENST00000395841 RRS1Q15050 365 aaKnown RBP14.37□□□□□ -0.11
RAE1-203ENST00000395841 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.37□□□□□ -0.11
RAE1-203ENST00000395841 PDZRN3Q9UPQ7 1066 aa14.37□□□□□ -0.11
RAE1-203ENST00000395841 PLEKHG3A1L390 1219 aa14.36□□□□□ -0.11
RAE1-203ENST00000395841 TTC21BQ7Z4L5 1316 aa14.36□□□□□ -0.11
RAE1-203ENST00000395841 BRPF1P55201 1214 aaPredicted RBP14.36□□□□□ -0.11
RAE1-203ENST00000395841 LMOD3Q0VAK6 560 aa14.36□□□□□ -0.11
RAE1-203ENST00000395841 ITPRIPQ8IWB1 547 aa14.36□□□□□ -0.11
RAE1-203ENST00000395841 IFT57Q9NWB7 429 aa14.36□□□□□ -0.11
RAE1-203ENST00000395841 TOPAZ1Q8N9V7 1692 aa14.36□□□□□ -0.11
RAE1-203ENST00000395841 GNAI1P63096 354 aa14.35□□□□□ -0.11
RAE1-203ENST00000395841 RTL5Q5HYW3 569 aaPredicted RBP14.35□□□□□ -0.11
RAE1-203ENST00000395841 NRKQ7Z2Y5 1582 aa14.35□□□□□ -0.11
RAE1-203ENST00000395841 ARHGAP23Q9P227 1491 aa14.35□□□□□ -0.11
RAE1-203ENST00000395841 HDAC1Q13547 482 aaPredicted RBP14.35□□□□□ -0.11
RAE1-203ENST00000395841 LAS1LQ9Y4W2 734 aaKnown RBP14.35□□□□□ -0.11
RAE1-203ENST00000395841 CEP170BQ9Y4F5 1589 aaPredicted RBP14.35□□□□□ -0.11
RAE1-203ENST00000395841 SLIT1O75093 1534 aa14.35□□□□□ -0.11
RAE1-203ENST00000395841 ACEP12821 1306 aa14.34□□□□□ -0.11
RAE1-203ENST00000395841 TBX22Q9Y458 520 aa14.34□□□□□ -0.11
RAE1-203ENST00000395841 VIRMAQ69YN4 1812 aaKnown RBP14.34□□□□□ -0.11
RAE1-203ENST00000395841 ZNF853P0CG23 659 aa14.34□□□□□ -0.11
RAE1-203ENST00000395841 TMEM57Q8N5G2 664 aa14.34□□□□□ -0.11
RAE1-203ENST00000395841 DAXXQ9UER7 740 aaPredicted RBP14.34□□□□□ -0.11
RAE1-203ENST00000395841 PLEKHG5O94827 1062 aa14.33□□□□□ -0.11
RAE1-203ENST00000395841 OVOS2A0A0J9YW53 1432 aa14.33□□□□□ -0.12
RAE1-203ENST00000395841 USP6P35125 1406 aa14.33□□□□□ -0.12
RAE1-203ENST00000395841 OVOS2Q6IE36 1432 aa14.33□□□□□ -0.12
RAE1-203ENST00000395841 ANKLE2Q86XL3 938 aa14.33□□□□□ -0.12
RAE1-203ENST00000395841 THUMPD2Q9BTF0 503 aaKnown RBP14.33□□□□□ -0.12
RAE1-203ENST00000395841 ZBTB40Q9NUA8 1239 aa14.32□□□□□ -0.12
RAE1-203ENST00000395841 ADAMTSL3P82987 1691 aa14.32□□□□□ -0.12
RAE1-203ENST00000395841 VAMP4O75379 141 aa14.32□□□□□ -0.12
RAE1-203ENST00000395841 USP19O94966 1318 aa14.32□□□□□ -0.12
RAE1-203ENST00000395841 PTCH1Q13635 1447 aa14.31□□□□□ -0.12
RAE1-203ENST00000395841 HSPA2P54652 639 aa14.31□□□□□ -0.12
RAE1-203ENST00000395841 ARHGAP45Q92619 1136 aa14.31□□□□□ -0.12
RAE1-203ENST00000395841 CFAP44Q96MT7 982 aa14.31□□□□□ -0.12
RAE1-203ENST00000395841 MBIPQ9NS73 344 aa14.31□□□□□ -0.12
RAE1-203ENST00000395841 USP35Q9P2H5 1018 aa14.31□□□□□ -0.12
RAE1-203ENST00000395841 EIF4A2Q14240 407 aaKnown RBP14.3□□□□□ -0.12
RAE1-203ENST00000395841 NUTM2GQ5VZR2 741 aa14.3□□□□□ -0.12
RAE1-203ENST00000395841 MRPL50Q8N5N7 158 aaKnown RBP14.3□□□□□ -0.12
RAE1-203ENST00000395841 USP31Q70CQ4 1352 aa14.3□□□□□ -0.12
RAE1-203ENST00000395841 DEKP35659 375 aaKnown RBP14.3□□□□□ -0.12
RAE1-203ENST00000395841 SSH2Q76I76 1423 aa14.3□□□□□ -0.12
RAE1-203ENST00000395841 SEC24BO95487 1268 aa14.29□□□□□ -0.12
RAE1-203ENST00000395841 SLC4A3P48751 1232 aa14.29□□□□□ -0.12
RAE1-203ENST00000395841 SMC5Q8IY18 1101 aa14.29□□□□□ -0.12
RAE1-203ENST00000395841 DIP2AQ14689 1571 aa14.29□□□□□ -0.12
RAE1-203ENST00000395841 PIK3R4Q99570 1358 aa14.29□□□□□ -0.12
RAE1-203ENST00000395841 TSPYL6Q8N831 410 aa14.28□□□□□ -0.12
RAE1-203ENST00000395841 TTC21AQ8NDW8 1320 aa14.28□□□□□ -0.12
RAE1-203ENST00000395841 CHMP4BQ9H444 224 aaKnown RBP14.28□□□□□ -0.12
RAE1-203ENST00000395841 NALCNQ8IZF0 1738 aa14.28□□□□□ -0.12
RAE1-203ENST00000395841 TWISTNBQ3B726 338 aaPredicted RBP14.28□□□□□ -0.12
RAE1-203ENST00000395841 SULT6B1Q6IMI4 303 aa14.27□□□□□ -0.13
RAE1-203ENST00000395841 FAM83GA6ND36 823 aa14.27□□□□□ -0.13
RAE1-203ENST00000395841 AEBP1Q8IUX7 1158 aa14.27□□□□□ -0.13
RAE1-203ENST00000395841 UPF2Q9HAU5 1272 aaKnown RBP14.27□□□□□ -0.13
RAE1-203ENST00000395841 RGPD8O14715 1765 aaPredicted RBP14.26□□□□□ -0.13
RAE1-203ENST00000395841 C14orf37Q86TY3 774 aa14.26□□□□□ -0.13
RAE1-203ENST00000395841 NGDNQ8NEJ9 315 aaKnown RBP14.26□□□□□ -0.13
RAE1-203ENST00000395841 C8orf58Q8NAV2 365 aa14.25□□□□□ -0.13
RAE1-203ENST00000395841 PEAK1Q9H792 1746 aa14.25□□□□□ -0.13
RAE1-203ENST00000395841 DLG5Q8TDM6 1919 aa14.25□□□□□ -0.13
RAE1-203ENST00000395841 ELL2O00472 640 aaPredicted RBP14.25□□□□□ -0.13
RAE1-203ENST00000395841 ZBTB7BO15156 539 aaPredicted RBP14.25□□□□□ -0.13
RAE1-203ENST00000395841 HSP90AB2PQ58FF8 381 aa14.25□□□□□ -0.13
RAE1-203ENST00000395841 ABCC4O15439 1325 aa14.25□□□□□ -0.13
RAE1-203ENST00000395841 DCTN1Q14203 1278 aa14.24□□□□□ -0.13
RAE1-203ENST00000395841 RGPD1P0DJD0 1748 aa14.24□□□□□ -0.13
RAE1-203ENST00000395841 XPCQ01831 940 aaPredicted RBP14.24□□□□□ -0.13
RAE1-203ENST00000395841 NUCB1Q02818 461 aa14.23□□□□□ -0.13
RAE1-203ENST00000395841 TBC1D32Q96NH3 1257 aa14.23□□□□□ -0.13
RAE1-203ENST00000395841 API5Q9BZZ5 524 aaKnown RBP14.23□□□□□ -0.13
RAE1-203ENST00000395841 ARHGEF10O15013 1369 aa14.23□□□□□ -0.13
RAE1-203ENST00000395841 XRN1Q8IZH2 1706 aaKnown RBP14.23□□□□□ -0.13
RAE1-203ENST00000395841 HAP1P54257 671 aaPredicted RBP14.22□□□□□ -0.13
RAE1-203ENST00000395841 SBNO1A3KN83 1393 aa14.22□□□□□ -0.13
RAE1-203ENST00000395841 MAP3K19Q56UN5 1328 aa14.22□□□□□ -0.13
RAE1-203ENST00000395841 BECN1Q14457 450 aa14.22□□□□□ -0.13
RAE1-203ENST00000395841 ANKARQ7Z5J8 1434 aa14.22□□□□□ -0.13
RAE1-203ENST00000395841 CHL1O00533 1208 aa14.21□□□□□ -0.13
RAE1-203ENST00000395841 SETD1BQ9UPS6 1966 aaKnown RBP14.21□□□□□ -0.13
RAE1-203ENST00000395841 FLT4P35916 1363 aa14.21□□□□□ -0.13
RAE1-203ENST00000395841 KIF24Q5T7B8 1368 aa14.21□□□□□ -0.14
RAE1-203ENST00000395841 KIAA0232Q92628 1395 aa14.2□□□□□ -0.14
RAE1-203ENST00000395841 NPHP4O75161 1426 aaPredicted RBP14.2□□□□□ -0.14
RAE1-203ENST00000395841 GCC1Q96CN9 775 aa14.2□□□□□ -0.14
RAE1-203ENST00000395841 NFKBIBQ15653 356 aa14.19□□□□□ -0.14
RAE1-203ENST00000395841 MCM10Q7L590 875 aa14.19□□□□□ -0.14
RAE1-203ENST00000395841 CHD1LQ86WJ1 897 aa14.19□□□□□ -0.14
RAE1-203ENST00000395841 KDM4FA0A1W2PPD8 638 aa14.18□□□□□ -0.14
RAE1-203ENST00000395841 ESCO1Q5FWF5 840 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms