RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 CNNM1Q9NRU3 951 aa17.35■□□□□ 0.37
PPARGC1B-203ENST00000394320 ALDH1L2Q3SY69 923 aa17.35■□□□□ 0.37
PPARGC1B-203ENST00000394320 PES1O00541 588 aaKnown RBP17.35■□□□□ 0.37
PPARGC1B-203ENST00000394320 NUP160Q12769 1436 aa17.34■□□□□ 0.37
PPARGC1B-203ENST00000394320 TTC21BQ7Z4L5 1316 aa17.34■□□□□ 0.37
PPARGC1B-203ENST00000394320 ZSCAN25Q6NSZ9 544 aa17.34■□□□□ 0.37
PPARGC1B-203ENST00000394320 ZNF518AQ6AHZ1 1483 aa17.34■□□□□ 0.37
PPARGC1B-203ENST00000394320 RAD21O60216 631 aa17.33■□□□□ 0.37
PPARGC1B-203ENST00000394320 ASXL2Q76L83 1435 aa17.33■□□□□ 0.37
PPARGC1B-203ENST00000394320 NUP153P49790 1475 aaKnown RBP17.33■□□□□ 0.37
PPARGC1B-203ENST00000394320 TNRQ92752 1358 aa17.33■□□□□ 0.36
PPARGC1B-203ENST00000394320 IPO7O95373 1038 aaKnown RBP17.32■□□□□ 0.36
PPARGC1B-203ENST00000394320 FOXD4L6Q3SYB3 417 aaPredicted RBP17.32■□□□□ 0.36
PPARGC1B-203ENST00000394320 FBXO31Q5XUX0 539 aaPredicted RBP17.32■□□□□ 0.36
PPARGC1B-203ENST00000394320 FOXD4L3Q6VB84 417 aaPredicted RBP17.32■□□□□ 0.36
PPARGC1B-203ENST00000394320 TTC39AQ5SRH9 613 aa17.32■□□□□ 0.36
PPARGC1B-203ENST00000394320 DMRT2Q9Y5R5 561 aa17.32■□□□□ 0.36
PPARGC1B-203ENST00000394320 CCDC57Q2TAC2 916 aa17.32■□□□□ 0.36
PPARGC1B-203ENST00000394320 A2MP01023 1474 aa17.32■□□□□ 0.36
PPARGC1B-203ENST00000394320 ANKRD1Q15327 319 aa17.32■□□□□ 0.36
PPARGC1B-203ENST00000394320 DNAJC2Q99543 621 aaKnown RBP17.32■□□□□ 0.36
PPARGC1B-203ENST00000394320 STARD3NLO95772 234 aa17.31■□□□□ 0.36
PPARGC1B-203ENST00000394320 ADAMTS12P58397 1594 aa17.31■□□□□ 0.36
PPARGC1B-203ENST00000394320 WDR7Q9Y4E6 1490 aa17.31■□□□□ 0.36
PPARGC1B-203ENST00000394320 SASS6Q6UVJ0 657 aa17.31■□□□□ 0.36
PPARGC1B-203ENST00000394320 NACAP1Q9BZK3 213 aa17.31■□□□□ 0.36
PPARGC1B-203ENST00000394320 CTTNBP2Q8WZ74 1663 aa17.3■□□□□ 0.36
PPARGC1B-203ENST00000394320 ZC3H6P61129 1189 aaKnown RBP17.3■□□□□ 0.36
PPARGC1B-203ENST00000394320 MBD3O95983 291 aa17.3■□□□□ 0.36
PPARGC1B-203ENST00000394320 ANKRD36BQ8N2N9 1353 aa17.29■□□□□ 0.36
PPARGC1B-203ENST00000394320 TAF7Q15545 349 aaPredicted RBP17.29■□□□□ 0.36
PPARGC1B-203ENST00000394320 NEK4P51957 841 aa17.29■□□□□ 0.36
PPARGC1B-203ENST00000394320 CHD1LQ86WJ1 897 aa17.29■□□□□ 0.36
PPARGC1B-203ENST00000394320 MPHOSPH8Q99549 860 aa17.29■□□□□ 0.36
PPARGC1B-203ENST00000394320 C1orf115Q9H7X2 142 aa17.29■□□□□ 0.36
PPARGC1B-203ENST00000394320 CEP126Q9P2H0 1117 aa17.29■□□□□ 0.36
PPARGC1B-203ENST00000394320 GOLGA6L1Q8N7Z2 621 aa17.29■□□□□ 0.36
PPARGC1B-203ENST00000394320 SF3B2Q13435 895 aaKnown RBP17.28■□□□□ 0.36
PPARGC1B-203ENST00000394320 SRGAP3O43295 1099 aa17.28■□□□□ 0.36
PPARGC1B-203ENST00000394320 PDIA4P13667 645 aaKnown RBP17.28■□□□□ 0.36
PPARGC1B-203ENST00000394320 NUTM2BA6NNL0 878 aaPredicted RBP17.28■□□□□ 0.36
PPARGC1B-203ENST00000394320 NUTM2EB1AL46 878 aaPredicted RBP17.28■□□□□ 0.36
PPARGC1B-203ENST00000394320 NME9Q86XW9 330 aa17.28■□□□□ 0.36
PPARGC1B-203ENST00000394320 NUTM2AQ8IVF1 878 aaPredicted RBP17.28■□□□□ 0.36
PPARGC1B-203ENST00000394320 CWC22Q9HCG8 908 aaKnown RBP17.28■□□□□ 0.36
PPARGC1B-203ENST00000394320 ABCC10Q5T3U5 1492 aa17.28■□□□□ 0.36
PPARGC1B-203ENST00000394320 KIAA0556O60303 1618 aa17.28■□□□□ 0.36
PPARGC1B-203ENST00000394320 LETM1O95202 739 aaPredicted RBP17.27■□□□□ 0.36
PPARGC1B-203ENST00000394320 DUSP27Q5VZP5 1158 aa17.27■□□□□ 0.36
PPARGC1B-203ENST00000394320 CCDC43Q96MW1 224 aaKnown RBP17.27■□□□□ 0.36
PPARGC1B-203ENST00000394320 PUS7Q96PZ0 661 aaKnown RBP17.27■□□□□ 0.36
PPARGC1B-203ENST00000394320 LARP1Q6PKG0 1096 aaKnown RBP17.27■□□□□ 0.36
PPARGC1B-203ENST00000394320 UHRF1BP1LA0JNW5 1464 aa17.27■□□□□ 0.35
PPARGC1B-203ENST00000394320 NAT10Q9H0A0 1025 aaKnown RBP17.27■□□□□ 0.35
PPARGC1B-203ENST00000394320 TCOF1Q13428 1488 aaKnown RBP17.26■□□□□ 0.35
PPARGC1B-203ENST00000394320 FAM177BA6PVY3 158 aa17.26■□□□□ 0.35
PPARGC1B-203ENST00000394320 CYP46A1Q9Y6A2 500 aa17.26■□□□□ 0.35
PPARGC1B-203ENST00000394320 MYL6BP14649 208 aa17.26■□□□□ 0.35
PPARGC1B-203ENST00000394320 CTNNA3Q9UI47 895 aa17.26■□□□□ 0.35
PPARGC1B-203ENST00000394320 CADPS2Q86UW7 1296 aa17.26■□□□□ 0.35
PPARGC1B-203ENST00000394320 RAB11FIP3O75154 756 aa17.25■□□□□ 0.35
PPARGC1B-203ENST00000394320 CCDC70Q6NSX1 233 aa17.25■□□□□ 0.35
PPARGC1B-203ENST00000394320 NKTRP30414 1462 aaKnown RBP17.25■□□□□ 0.35
PPARGC1B-203ENST00000394320 SHANK2Q9UPX8 1470 aa17.25■□□□□ 0.35
PPARGC1B-203ENST00000394320 FYB1O15117 783 aa17.25■□□□□ 0.35
PPARGC1B-203ENST00000394320 AEBP1Q8IUX7 1158 aa17.25■□□□□ 0.35
PPARGC1B-203ENST00000394320 ZNF652Q9Y2D9 606 aa17.25■□□□□ 0.35
PPARGC1B-203ENST00000394320 RALGAPBQ86X10 1494 aa17.25■□□□□ 0.35
PPARGC1B-203ENST00000394320 XPCQ01831 940 aaPredicted RBP17.24■□□□□ 0.35
PPARGC1B-203ENST00000394320 CCDC184Q52MB2 194 aa17.24■□□□□ 0.35
PPARGC1B-203ENST00000394320 TTC21AQ8NDW8 1320 aa17.24■□□□□ 0.35
PPARGC1B-203ENST00000394320 KRT32Q14532 448 aa17.24■□□□□ 0.35
PPARGC1B-203ENST00000394320 ZNF396Q96N95 335 aaPredicted RBP17.24■□□□□ 0.35
PPARGC1B-203ENST00000394320 IL16Q14005 1332 aa17.23■□□□□ 0.35
PPARGC1B-203ENST00000394320 SYCP2Q9BX26 1530 aa17.23■□□□□ 0.35
PPARGC1B-203ENST00000394320 TMOD3Q9NYL9 352 aa17.23■□□□□ 0.35
PPARGC1B-203ENST00000394320 C11orf95C9JLR9 678 aaPredicted RBP17.23■□□□□ 0.35
PPARGC1B-203ENST00000394320 HSP90AB3PQ58FF7 597 aa17.23■□□□□ 0.35
PPARGC1B-203ENST00000394320 KIF1BPQ96EK5 621 aa17.23■□□□□ 0.35
PPARGC1B-203ENST00000394320 AACSQ86V21 672 aa17.22■□□□□ 0.35
PPARGC1B-203ENST00000394320 JMYQ8N9B5 988 aa17.22■□□□□ 0.35
PPARGC1B-203ENST00000394320 RARSP54136 660 aaKnown RBP17.22■□□□□ 0.35
PPARGC1B-203ENST00000394320 PCMTD1Q96MG8 357 aaPredicted RBP17.22■□□□□ 0.35
PPARGC1B-203ENST00000394320 BACH2Q9BYV9 841 aa17.22■□□□□ 0.35
PPARGC1B-203ENST00000394320 OLFM4Q6UX06 510 aa17.22■□□□□ 0.35
PPARGC1B-203ENST00000394320 TMEM57Q8N5G2 664 aa17.22■□□□□ 0.35
PPARGC1B-203ENST00000394320 SDF4Q9BRK5 362 aa17.21■□□□□ 0.35
PPARGC1B-203ENST00000394320 WDR62O43379 1518 aa17.21■□□□□ 0.35
PPARGC1B-203ENST00000394320 FOXO3O43524 673 aa17.21■□□□□ 0.35
PPARGC1B-203ENST00000394320 CEBPAP49715 358 aaPredicted RBP17.21■□□□□ 0.35
PPARGC1B-203ENST00000394320 AKAP2Q9Y2D5 859 aa17.21■□□□□ 0.35
PPARGC1B-203ENST00000394320 EMILIN1Q9Y6C2 1016 aa17.21■□□□□ 0.35
PPARGC1B-203ENST00000394320 IGHMBP2P38935 993 aaKnown RBP17.21■□□□□ 0.35
PPARGC1B-203ENST00000394320 ZSCAN31Q96LW9 406 aaPredicted RBP17.21■□□□□ 0.35
PPARGC1B-203ENST00000394320 PTPRCP08575 1304 aa17.21■□□□□ 0.35
PPARGC1B-203ENST00000394320 TRIM22Q8IYM9 498 aa17.21■□□□□ 0.34
PPARGC1B-203ENST00000394320 SIL1Q9H173 461 aa17.2■□□□□ 0.34
PPARGC1B-203ENST00000394320 A0A0U1RQG5 324 aaPredicted RBP17.2■□□□□ 0.34
PPARGC1B-203ENST00000394320 HYPKQ9NX55 129 aa17.2■□□□□ 0.34
PPARGC1B-203ENST00000394320 MCM10Q7L590 875 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms