RNA–Protein interactions for RNA: ENST00000394196.8

CHD2-201, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD2, Length 9,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-201ENST00000394196 SLMAPQ14BN4 828 aa10.63□□□□□ -0.71
CHD2-201ENST00000394196 CEP135Q66GS9 1140 aa10.63□□□□□ -0.71
CHD2-201ENST00000394196 SMC2O95347 1197 aa10.63□□□□□ -0.71
CHD2-201ENST00000394196 VPS53Q5VIR6 699 aa10.63□□□□□ -0.71
CHD2-201ENST00000394196 ANKS4BQ8N8V4 417 aa10.63□□□□□ -0.71
CHD2-201ENST00000394196 ANO2Q9NQ90 1003 aa10.63□□□□□ -0.71
CHD2-201ENST00000394196 VPS37CA5D8V6 355 aaPredicted RBP10.63□□□□□ -0.71
CHD2-201ENST00000394196 CRBNQ96SW2 442 aa10.63□□□□□ -0.71
CHD2-201ENST00000394196 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.63□□□□□ -0.712e-6■■■■■ 36.2
CHD2-201ENST00000394196 CEP128Q6ZU80 1094 aa10.62□□□□□ -0.71
CHD2-201ENST00000394196 CFAP45Q9UL16 551 aa10.62□□□□□ -0.71
CHD2-201ENST00000394196 CCDC148Q8NFR7 591 aa10.62□□□□□ -0.71
CHD2-201ENST00000394196 BAZ1BQ9UIG0 1483 aaKnown RBP10.62□□□□□ -0.71
CHD2-201ENST00000394196 RPUSD2Q8IZ73 545 aaKnown RBP10.62□□□□□ -0.71
CHD2-201ENST00000394196 USP6NLQ92738 828 aa10.62□□□□□ -0.71
CHD2-201ENST00000394196 API5Q9BZZ5 524 aaKnown RBP10.62□□□□□ -0.71
CHD2-201ENST00000394196 HIP1O00291 1037 aa10.62□□□□□ -0.71
CHD2-201ENST00000394196 NEMFO60524 1076 aa10.62□□□□□ -0.71
CHD2-201ENST00000394196 STIM1Q13586 685 aa10.61□□□□□ -0.71
CHD2-201ENST00000394196 MAP7Q14244 749 aa10.61□□□□□ -0.71
CHD2-201ENST00000394196 POTEDQ86YR6 584 aa10.61□□□□□ -0.71
CHD2-201ENST00000394196 PLCD3Q8N3E9 789 aa10.61□□□□□ -0.71
CHD2-201ENST00000394196 RB1CC1Q8TDY2 1594 aa10.61□□□□□ -0.71
CHD2-201ENST00000394196 MSL1Q68DK7 614 aa10.61□□□□□ -0.71
CHD2-201ENST00000394196 GBP7Q8N8V2 638 aaPredicted RBP10.61□□□□□ -0.71
CHD2-201ENST00000394196 TOMM22Q9NS69 142 aa10.61□□□□□ -0.71
CHD2-201ENST00000394196 PABPN1Q86U42 306 aaKnown RBP eCLIP10.61□□□□□ -0.718e-7■□□□□ 10.3
CHD2-201ENST00000394196 LMNTD2Q8IXW0 634 aa10.61□□□□□ -0.71
CHD2-201ENST00000394196 WDR33Q9C0J8 1336 aaKnown RBP10.61□□□□□ -0.71
CHD2-201ENST00000394196 ZSCAN12O43309 604 aa10.61□□□□□ -0.71
CHD2-201ENST00000394196 CDC45O75419 566 aa10.61□□□□□ -0.71
CHD2-201ENST00000394196 ANKRD1Q15327 319 aa10.61□□□□□ -0.71
CHD2-201ENST00000394196 RABEP2Q9H5N1 569 aa10.61□□□□□ -0.71
CHD2-201ENST00000394196 FEZ2Q9UHY8 353 aaPredicted RBP10.61□□□□□ -0.71
CHD2-201ENST00000394196 ZBTB12Q9Y330 459 aaPredicted RBP10.61□□□□□ -0.71
CHD2-201ENST00000394196 PLPPR3Q6T4P5 718 aa10.61□□□□□ -0.71
CHD2-201ENST00000394196 SLC4A10Q6U841 1118 aa10.61□□□□□ -0.71
CHD2-201ENST00000394196 PSMD7P51665 324 aa10.61□□□□□ -0.71
CHD2-201ENST00000394196 CHMP7Q8WUX9 453 aaPredicted RBP10.61□□□□□ -0.71
CHD2-201ENST00000394196 MACROD2A1Z1Q3 448 aa10.6□□□□□ -0.71
CHD2-201ENST00000394196 SMTNL1A8MU46 457 aa10.6□□□□□ -0.71
CHD2-201ENST00000394196 FOXD4L6Q3SYB3 417 aaPredicted RBP10.6□□□□□ -0.71
CHD2-201ENST00000394196 FOXD4L3Q6VB84 417 aaPredicted RBP10.6□□□□□ -0.71
CHD2-201ENST00000394196 VCXQ9H320 206 aa10.6□□□□□ -0.71
CHD2-201ENST00000394196 WRNQ14191 1432 aaPredicted RBP eCLIP10.6□□□□□ -0.71
CHD2-201ENST00000394196 IMMTQ16891 758 aaKnown RBP10.6□□□□□ -0.71
CHD2-201ENST00000394196 TEX2Q8IWB9 1127 aa10.6□□□□□ -0.71
CHD2-201ENST00000394196 CEP112Q8N8E3 955 aa10.6□□□□□ -0.71
CHD2-201ENST00000394196 TUBB4AP04350 444 aa10.6□□□□□ -0.71
CHD2-201ENST00000394196 ZNF853P0CG23 659 aa10.6□□□□□ -0.71
CHD2-201ENST00000394196 CCDC152Q4G0S7 254 aa10.6□□□□□ -0.71
CHD2-201ENST00000394196 CCDC83Q8IWF9 413 aa10.6□□□□□ -0.71
CHD2-201ENST00000394196 GRIPAP1Q4V328 841 aa10.6□□□□□ -0.71
CHD2-201ENST00000394196 RPAINQ86UA6 219 aa10.6□□□□□ -0.71
CHD2-201ENST00000394196 DDX23Q9BUQ8 820 aaKnown RBP10.6□□□□□ -0.71
CHD2-201ENST00000394196 CLUAP1Q96AJ1 413 aa10.59□□□□□ -0.71
CHD2-201ENST00000394196 NSRP1Q9H0G5 558 aaKnown RBP10.59□□□□□ -0.71
CHD2-201ENST00000394196 CBX1P83916 185 aa10.59□□□□□ -0.71
CHD2-201ENST00000394196 PPFIA2O75334 1257 aa10.59□□□□□ -0.71
CHD2-201ENST00000394196 NAA25Q14CX7 972 aa10.59□□□□□ -0.71
CHD2-201ENST00000394196 CCDC43Q96MW1 224 aaKnown RBP10.59□□□□□ -0.71
CHD2-201ENST00000394196 ANAPC15P60006 121 aa10.58□□□□□ -0.71
CHD2-201ENST00000394196 GABPB1Q06547 395 aaPredicted RBP10.58□□□□□ -0.71
CHD2-201ENST00000394196 RAB3GAP2Q9H2M9 1393 aa10.58□□□□□ -0.72
CHD2-201ENST00000394196 NLRP5P59047 1200 aa10.58□□□□□ -0.72
CHD2-201ENST00000394196 EXOC6Q8TAG9 804 aa10.58□□□□□ -0.72
CHD2-201ENST00000394196 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.58□□□□□ -0.72
CHD2-201ENST00000394196 CCDC114Q96M63 670 aa10.58□□□□□ -0.72
CHD2-201ENST00000394196 SERPINC1P01008 464 aa10.58□□□□□ -0.72
CHD2-201ENST00000394196 PTPN14Q15678 1187 aa10.58□□□□□ -0.72
CHD2-201ENST00000394196 DZIP1LQ8IYY4 767 aaKnown RBP10.58□□□□□ -0.72
CHD2-201ENST00000394196 PAXBP1Q9Y5B6 917 aa10.58□□□□□ -0.72
CHD2-201ENST00000394196 GTF2F1P35269 517 aaKnown RBP eCLIP10.58□□□□□ -0.721e-11■■■■□ 20.6
CHD2-201ENST00000394196 PPP4R3BQ5MIZ7 849 aa10.58□□□□□ -0.72
CHD2-201ENST00000394196 LUC7L3O95232 432 aaKnown RBP10.58□□□□□ -0.72
CHD2-201ENST00000394196 BAZ1AQ9NRL2 1556 aaPredicted RBP10.57□□□□□ -0.72
CHD2-201ENST00000394196 AIMP1Q12904 312 aaKnown RBP10.57□□□□□ -0.72
CHD2-201ENST00000394196 WHAMMQ8TF30 809 aa10.57□□□□□ -0.72
CHD2-201ENST00000394196 TRIM63Q969Q1 353 aa10.57□□□□□ -0.72
CHD2-201ENST00000394196 DNAJC8O75937 253 aaPredicted RBP10.57□□□□□ -0.72
CHD2-201ENST00000394196 ZFYVE27Q5T4F4 411 aa10.57□□□□□ -0.72
CHD2-201ENST00000394196 RALYLQ86SE5 291 aaKnown RBP10.57□□□□□ -0.72
CHD2-201ENST00000394196 DHX37Q8IY37 1157 aaKnown RBP10.57□□□□□ -0.72
CHD2-201ENST00000394196 UACAQ9BZF9 1416 aa10.57□□□□□ -0.72
CHD2-201ENST00000394196 IFIT2P09913 472 aaKnown RBP10.57□□□□□ -0.72
CHD2-201ENST00000394196 TACO1Q9BSH4 297 aaKnown RBP10.57□□□□□ -0.72
CHD2-201ENST00000394196 CCDC40Q4G0X9 1142 aa10.56□□□□□ -0.72
CHD2-201ENST00000394196 KRT85P78386 507 aa10.56□□□□□ -0.72
CHD2-201ENST00000394196 TSPYL2Q9H2G4 693 aaPredicted RBP10.56□□□□□ -0.72
CHD2-201ENST00000394196 RAB3IL1Q8TBN0 382 aa10.56□□□□□ -0.72
CHD2-201ENST00000394196 TNMDQ9H2S6 317 aa10.56□□□□□ -0.72
CHD2-201ENST00000394196 SEPT10Q9P0V9 454 aa10.56□□□□□ -0.72
CHD2-201ENST00000394196 FBF1Q8TES7 1133 aa10.56□□□□□ -0.72
CHD2-201ENST00000394196 PRDM10Q9NQV6 1147 aa10.56□□□□□ -0.72
CHD2-201ENST00000394196 WDR63Q8IWG1 891 aa10.56□□□□□ -0.72
CHD2-201ENST00000394196 TUBBP07437 444 aa10.56□□□□□ -0.72
CHD2-201ENST00000394196 ERCC3P19447 782 aa10.56□□□□□ -0.72
CHD2-201ENST00000394196 ABCC9O60706 1549 aa10.56□□□□□ -0.72
CHD2-201ENST00000394196 PRKRIP1Q9H875 184 aaPredicted RBP10.56□□□□□ -0.72
CHD2-201ENST00000394196 SESN3P58005 492 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms