RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 ZNF428Q96B54 188 aa9.22□□□□□ -0.93
SMAD1-202ENST00000394092 POLKQ9UBT6 870 aa9.22□□□□□ -0.93
SMAD1-202ENST00000394092 TRIM35Q9UPQ4 493 aa9.22□□□□□ -0.93
SMAD1-202ENST00000394092 ROBO2Q9HCK4 1378 aa9.21□□□□□ -0.93
SMAD1-202ENST00000394092 LMOD3Q0VAK6 560 aa9.21□□□□□ -0.93
SMAD1-202ENST00000394092 RSPH6AQ9H0K4 717 aa9.21□□□□□ -0.93
SMAD1-202ENST00000394092 SMC4Q9NTJ3 1288 aa9.21□□□□□ -0.93
SMAD1-202ENST00000394092 FMN2Q9NZ56 1722 aa9.2□□□□□ -0.94
SMAD1-202ENST00000394092 DZIP1LQ8IYY4 767 aaKnown RBP9.2□□□□□ -0.94
SMAD1-202ENST00000394092 PPM1GO15355 546 aaPredicted RBP9.2□□□□□ -0.94
SMAD1-202ENST00000394092 PRKAR2BP31323 418 aa9.2□□□□□ -0.94
SMAD1-202ENST00000394092 EXOSC9Q06265 439 aaKnown RBP9.2□□□□□ -0.94
SMAD1-202ENST00000394092 MVPQ14764 893 aaKnown RBP9.2□□□□□ -0.94
SMAD1-202ENST00000394092 NFE2L2Q16236 605 aa9.2□□□□□ -0.94
SMAD1-202ENST00000394092 ALDH1L2Q3SY69 923 aa9.2□□□□□ -0.94
SMAD1-202ENST00000394092 XRN1Q8IZH2 1706 aaKnown RBP9.19□□□□□ -0.94
SMAD1-202ENST00000394092 IPO8O15397 1037 aaKnown RBP9.19□□□□□ -0.94
SMAD1-202ENST00000394092 RGS3P49796 1198 aa9.19□□□□□ -0.94
SMAD1-202ENST00000394092 NME9Q86XW9 330 aa9.19□□□□□ -0.94
SMAD1-202ENST00000394092 RWDD1Q9H446 243 aaPredicted RBP9.19□□□□□ -0.94
SMAD1-202ENST00000394092 DDX19BQ9UMR2 479 aa9.19□□□□□ -0.94
SMAD1-202ENST00000394092 OVOS2A0A0J9YW53 1432 aa9.18□□□□□ -0.94
SMAD1-202ENST00000394092 USP6P35125 1406 aa9.18□□□□□ -0.94
SMAD1-202ENST00000394092 OVOS2Q6IE36 1432 aa9.18□□□□□ -0.94
SMAD1-202ENST00000394092 IL13P35225 146 aa9.18□□□□□ -0.94
SMAD1-202ENST00000394092 C8orf34Q49A92 452 aa9.18□□□□□ -0.94
SMAD1-202ENST00000394092 TSR2Q969E8 191 aaKnown RBP9.18□□□□□ -0.94
SMAD1-202ENST00000394092 BCL2L13Q9BXK5 485 aa9.18□□□□□ -0.94
SMAD1-202ENST00000394092 CHMP4BQ9H444 224 aaKnown RBP9.18□□□□□ -0.94
SMAD1-202ENST00000394092 PRR36Q9H6K5 1346 aa9.18□□□□□ -0.94
SMAD1-202ENST00000394092 PLEKHG3A1L390 1219 aa9.17□□□□□ -0.94
SMAD1-202ENST00000394092 GNAI1P63096 354 aa9.17□□□□□ -0.94
SMAD1-202ENST00000394092 ATF7IPQ6VMQ6 1270 aa9.17□□□□□ -0.94
SMAD1-202ENST00000394092 EMILIN1Q9Y6C2 1016 aa9.17□□□□□ -0.94
SMAD1-202ENST00000394092 USP54Q70EL1 1684 aa9.17□□□□□ -0.94
SMAD1-202ENST00000394092 RGPD1P0DJD0 1748 aa9.17□□□□□ -0.94
SMAD1-202ENST00000394092 PAK3O75914 559 aaPredicted RBP9.16□□□□□ -0.94
SMAD1-202ENST00000394092 IGHDP01880 384 aa9.16□□□□□ -0.94
SMAD1-202ENST00000394092 RLBP1P12271 317 aa9.16□□□□□ -0.94
SMAD1-202ENST00000394092 LTKP29376 864 aa9.16□□□□□ -0.94
SMAD1-202ENST00000394092 BRPF1P55201 1214 aaPredicted RBP9.16□□□□□ -0.94
SMAD1-202ENST00000394092 THEMISQ8N1K5 641 aaPredicted RBP9.16□□□□□ -0.94
SMAD1-202ENST00000394092 IFT57Q9NWB7 429 aa9.16□□□□□ -0.94
SMAD1-202ENST00000394092 TBX22Q9Y458 520 aa9.16□□□□□ -0.94
SMAD1-202ENST00000394092 TTC21BQ7Z4L5 1316 aa9.16□□□□□ -0.94
SMAD1-202ENST00000394092 TTC21AQ8NDW8 1320 aa9.16□□□□□ -0.94
SMAD1-202ENST00000394092 CEP170BQ9Y4F5 1589 aaPredicted RBP9.16□□□□□ -0.94
SMAD1-202ENST00000394092 PIK3R4Q99570 1358 aa9.16□□□□□ -0.94
SMAD1-202ENST00000394092 ZNF142P52746 1687 aaPredicted RBP9.16□□□□□ -0.94
SMAD1-202ENST00000394092 ANKARQ7Z5J8 1434 aa9.16□□□□□ -0.94
SMAD1-202ENST00000394092 PTPRUQ92729 1446 aa9.16□□□□□ -0.94
SMAD1-202ENST00000394092 HAP1P54257 671 aaPredicted RBP9.16□□□□□ -0.94
SMAD1-202ENST00000394092 RTL5Q5HYW3 569 aaPredicted RBP9.16□□□□□ -0.94
SMAD1-202ENST00000394092 LHX8Q68G74 356 aa9.16□□□□□ -0.94
SMAD1-202ENST00000394092 SKAP1Q86WV1 359 aa9.16□□□□□ -0.94
SMAD1-202ENST00000394092 SSH1Q8WYL5 1049 aa9.16□□□□□ -0.94
SMAD1-202ENST00000394092 DAXXQ9UER7 740 aaPredicted RBP9.16□□□□□ -0.94
SMAD1-202ENST00000394092 RGPD8O14715 1765 aaPredicted RBP9.15□□□□□ -0.94
SMAD1-202ENST00000394092 HMOX1P09601 288 aa9.15□□□□□ -0.94
SMAD1-202ENST00000394092 TRIM27P14373 513 aa9.15□□□□□ -0.94
SMAD1-202ENST00000394092 ACEP12821 1306 aa9.15□□□□□ -0.94
SMAD1-202ENST00000394092 USP31Q70CQ4 1352 aa9.15□□□□□ -0.95
SMAD1-202ENST00000394092 PEAK1Q9H792 1746 aa9.14□□□□□ -0.95
SMAD1-202ENST00000394092 ITPRIPQ8IWB1 547 aa9.14□□□□□ -0.95
SMAD1-202ENST00000394092 PCDHB15Q9Y5E8 787 aa9.14□□□□□ -0.95
SMAD1-202ENST00000394092 HDAC1Q13547 482 aaPredicted RBP9.13□□□□□ -0.95
SMAD1-202ENST00000394092 AMOTL2Q9Y2J4 779 aa9.13□□□□□ -0.95
SMAD1-202ENST00000394092 SSH2Q76I76 1423 aa9.13□□□□□ -0.95
SMAD1-202ENST00000394092 RRS1Q15050 365 aaKnown RBP9.13□□□□□ -0.95
SMAD1-202ENST00000394092 ARHGAP45Q92619 1136 aa9.13□□□□□ -0.95
SMAD1-202ENST00000394092 UPF2Q9HAU5 1272 aaKnown RBP9.13□□□□□ -0.95
SMAD1-202ENST00000394092 ZRANB1Q9UGI0 708 aa9.13□□□□□ -0.95
SMAD1-202ENST00000394092 NOB1Q9ULX3 412 aaKnown RBP9.13□□□□□ -0.95
SMAD1-202ENST00000394092 TNNQ9UQP3 1299 aa9.13□□□□□ -0.95
SMAD1-202ENST00000394092 NCKAP5LQ9HCH0 1330 aa9.13□□□□□ -0.95
SMAD1-202ENST00000394092 ARHGEF10O15013 1369 aa9.13□□□□□ -0.95
SMAD1-202ENST00000394092 PIK3C2AO00443 1686 aa9.13□□□□□ -0.95
SMAD1-202ENST00000394092 CHD2O14647 1828 aaKnown RBP9.12□□□□□ -0.95
SMAD1-202ENST00000394092 ZNF853P0CG23 659 aa9.12□□□□□ -0.95
SMAD1-202ENST00000394092 CEBPAP49715 358 aaPredicted RBP9.12□□□□□ -0.95
SMAD1-202ENST00000394092 PHACTR3Q96KR7 559 aa9.12□□□□□ -0.95
SMAD1-202ENST00000394092 CFAP44Q96MT7 982 aa9.12□□□□□ -0.95
SMAD1-202ENST00000394092 SLC26A8Q96RN1 970 aa9.12□□□□□ -0.95
SMAD1-202ENST00000394092 USP35Q9P2H5 1018 aa9.12□□□□□ -0.95
SMAD1-202ENST00000394092 LAS1LQ9Y4W2 734 aaKnown RBP9.12□□□□□ -0.95
SMAD1-202ENST00000394092 SBNO1A3KN83 1393 aa9.11□□□□□ -0.95
SMAD1-202ENST00000394092 FLT4P35916 1363 aa9.11□□□□□ -0.95
SMAD1-202ENST00000394092 KIF24Q5T7B8 1368 aa9.11□□□□□ -0.95
SMAD1-202ENST00000394092 FBLN1P23142 703 aa9.11□□□□□ -0.95
SMAD1-202ENST00000394092 PDZRN3Q9UPQ7 1066 aa9.11□□□□□ -0.95
SMAD1-202ENST00000394092 EIF4A2Q14240 407 aaKnown RBP9.1□□□□□ -0.95
SMAD1-202ENST00000394092 TMEM57Q8N5G2 664 aa9.1□□□□□ -0.95
SMAD1-202ENST00000394092 SETD1BQ9UPS6 1966 aaKnown RBP9.1□□□□□ -0.95
SMAD1-202ENST00000394092 NBR1Q14596 966 aa9.1□□□□□ -0.95
SMAD1-202ENST00000394092 TWISTNBQ3B726 338 aaPredicted RBP9.1□□□□□ -0.95
SMAD1-202ENST00000394092 NGDNQ8NEJ9 315 aaKnown RBP9.1□□□□□ -0.95
SMAD1-202ENST00000394092 API5Q9BZZ5 524 aaKnown RBP9.1□□□□□ -0.95
SMAD1-202ENST00000394092 MBIPQ9NS73 344 aa9.1□□□□□ -0.95
SMAD1-202ENST00000394092 ZBTB40Q9NUA8 1239 aa9.1□□□□□ -0.95
SMAD1-202ENST00000394092 MARF1Q9Y4F3 1742 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms