RNA–Protein interactions for RNA: ENST00000391218.1

RNU6-1250P-201, Transcript of RNA, U6 small nuclear 1250, pseudogene, humanhuman

BASIC

Gene RNU6-1250P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1250P-201ENST00000391218 OXCT2Q9BYC2 517 aaPredicted RBP0.93□□□□□ -2.26
RNU6-1250P-201ENST00000391218 ERBB2P04626 1255 aa0.92□□□□□ -2.26
RNU6-1250P-201ENST00000391218 JUNBP17275 347 aaPredicted RBP0.92□□□□□ -2.26
RNU6-1250P-201ENST00000391218 ITGB5P18084 799 aa0.92□□□□□ -2.26
RNU6-1250P-201ENST00000391218 GPR162Q16538 588 aa0.92□□□□□ -2.26
RNU6-1250P-201ENST00000391218 PLCD3Q8N3E9 789 aa0.92□□□□□ -2.26
RNU6-1250P-201ENST00000391218 ZBTB47Q9UFB7 747 aaPredicted RBP0.92□□□□□ -2.26
RNU6-1250P-201ENST00000391218 GRIN3BO60391 1043 aa0.91□□□□□ -2.26
RNU6-1250P-201ENST00000391218 WNT11O96014 354 aa0.91□□□□□ -2.26
RNU6-1250P-201ENST00000391218 TIMP2P16035 220 aa0.91□□□□□ -2.26
RNU6-1250P-201ENST00000391218 TMEM132AQ24JP5 1023 aa0.91□□□□□ -2.26
RNU6-1250P-201ENST00000391218 XKR5Q6UX68 686 aa0.91□□□□□ -2.26
RNU6-1250P-201ENST00000391218 PACS2Q86VP3 889 aa0.91□□□□□ -2.26
RNU6-1250P-201ENST00000391218 ZNF575Q86XF7 245 aa0.91□□□□□ -2.26
RNU6-1250P-201ENST00000391218 EDARADDQ8WWZ3 215 aa0.91□□□□□ -2.26
RNU6-1250P-201ENST00000391218 UPF1Q92900 1129 aaKnown RBP eCLIP0.91□□□□□ -2.26
RNU6-1250P-201ENST00000391218 MUC19Q7Z5P9 8384 aa0.91□□□□□ -2.26
RNU6-1250P-201ENST00000391218 TTLL8A6PVC2 850 aa0.9□□□□□ -2.27
RNU6-1250P-201ENST00000391218 RAP1GAPP47736 663 aa0.9□□□□□ -2.27
RNU6-1250P-201ENST00000391218 HDGFP51858 240 aaKnown RBP0.9□□□□□ -2.27
RNU6-1250P-201ENST00000391218 PLPP6Q8IY26 295 aa0.9□□□□□ -2.27
RNU6-1250P-201ENST00000391218 MPNDQ8N594 471 aa0.9□□□□□ -2.27
RNU6-1250P-201ENST00000391218 DGKGP49619 791 aa0.89□□□□□ -2.27
RNU6-1250P-201ENST00000391218 WDR4P57081 412 aaKnown RBP0.89□□□□□ -2.27
RNU6-1250P-201ENST00000391218 NBPF20Q3BBV1 942 aa0.89□□□□□ -2.27
RNU6-1250P-201ENST00000391218 CDCP2Q5VXM1 449 aa0.89□□□□□ -2.27
RNU6-1250P-201ENST00000391218 NBPF10Q6P3W6 841 aaKnown RBP0.89□□□□□ -2.27
RNU6-1250P-201ENST00000391218 A0A0G2JLL6 359 aaPredicted RBP0.88□□□□□ -2.27
RNU6-1250P-201ENST00000391218 SOX12O15370 315 aa0.88□□□□□ -2.27
RNU6-1250P-201ENST00000391218 PLVAPQ9BX97 442 aa0.88□□□□□ -2.27
RNU6-1250P-201ENST00000391218 SCAND2PQ9GZW5 306 aaPredicted RBP0.88□□□□□ -2.27
RNU6-1250P-201ENST00000391218 TSKSQ9UJT2 592 aa0.88□□□□□ -2.27
RNU6-1250P-201ENST00000391218 UPP2O95045 317 aa0.87□□□□□ -2.27
RNU6-1250P-201ENST00000391218 SPINK2P20155 84 aa0.87□□□□□ -2.27
RNU6-1250P-201ENST00000391218 SKOR1P84550 965 aa0.87□□□□□ -2.27
RNU6-1250P-201ENST00000391218 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP0.87□□□□□ -2.27
RNU6-1250P-201ENST00000391218 MX2P20592 715 aa0.86□□□□□ -2.27
RNU6-1250P-201ENST00000391218 GRNP28799 593 aaKnown RBP0.86□□□□□ -2.27
RNU6-1250P-201ENST00000391218 LINC00528Q8N1L1 170 aa0.86□□□□□ -2.27
RNU6-1250P-201ENST00000391218 TRIM11Q96F44 468 aa0.86□□□□□ -2.27
RNU6-1250P-201ENST00000391218 NELL2Q99435 816 aa0.86□□□□□ -2.27
RNU6-1250P-201ENST00000391218 SPSB2Q99619 263 aa0.86□□□□□ -2.27
RNU6-1250P-201ENST00000391218 UNKLQ9H9P5 680 aaKnown RBP0.86□□□□□ -2.27
RNU6-1250P-201ENST00000391218 CUEDC1Q9NWM3 386 aaPredicted RBP0.86□□□□□ -2.27
RNU6-1250P-201ENST00000391218 ADH1CP00326 375 aa0.85□□□□□ -2.27
RNU6-1250P-201ENST00000391218 TGFB1P01137 390 aa0.85□□□□□ -2.27
RNU6-1250P-201ENST00000391218 SLPIP03973 132 aa0.85□□□□□ -2.27
RNU6-1250P-201ENST00000391218 KRTAP10-11P60412 298 aa0.85□□□□□ -2.27
RNU6-1250P-201ENST00000391218 NNTQ13423 1086 aa0.85□□□□□ -2.27
RNU6-1250P-201ENST00000391218 KRTAP5-7Q6L8G8 165 aa0.85□□□□□ -2.27
RNU6-1250P-201ENST00000391218 CBLL1Q75N03 491 aa0.85□□□□□ -2.27
RNU6-1250P-201ENST00000391218 NACC1Q96RE7 527 aa0.85□□□□□ -2.27
RNU6-1250P-201ENST00000391218 NSFL1CQ9UNZ2 370 aaKnown RBP0.85□□□□□ -2.27
RNU6-1250P-201ENST00000391218 MYRFQ9Y2G1 1151 aa0.85□□□□□ -2.27
RNU6-1250P-201ENST00000391218 SIAH2O43255 324 aa0.84□□□□□ -2.27
RNU6-1250P-201ENST00000391218 NFIXQ14938 502 aa0.84□□□□□ -2.27
RNU6-1250P-201ENST00000391218 LCE3AQ5TA76 89 aa0.84□□□□□ -2.27
RNU6-1250P-201ENST00000391218 MSL1Q68DK7 614 aa0.84□□□□□ -2.27
RNU6-1250P-201ENST00000391218 FAM229AH3BQW9 127 aa0.83□□□□□ -2.28
RNU6-1250P-201ENST00000391218 NR1I2O75469 434 aa0.83□□□□□ -2.28
RNU6-1250P-201ENST00000391218 KRTAP10-12P60413 245 aa0.83□□□□□ -2.28
RNU6-1250P-201ENST00000391218 PRRT3Q5FWE3 981 aa0.83□□□□□ -2.28
RNU6-1250P-201ENST00000391218 SLF2Q8IX21 1173 aa0.83□□□□□ -2.28
RNU6-1250P-201ENST00000391218 OXER1Q8TDS5 423 aa0.83□□□□□ -2.28
RNU6-1250P-201ENST00000391218 ZFAND3Q9H8U3 227 aa0.83□□□□□ -2.28
RNU6-1250P-201ENST00000391218 DLL4Q9NR61 685 aa0.83□□□□□ -2.28
RNU6-1250P-201ENST00000391218 FSTP19883 344 aa0.82□□□□□ -2.28
RNU6-1250P-201ENST00000391218 NRG1Q02297 640 aaPredicted RBP0.82□□□□□ -2.28
RNU6-1250P-201ENST00000391218 SWT1Q5T5J6 900 aaKnown RBP0.82□□□□□ -2.28
RNU6-1250P-201ENST00000391218 ANKLE2Q86XL3 938 aa0.82□□□□□ -2.28
RNU6-1250P-201ENST00000391218 SCUBE3Q8IX30 993 aa0.82□□□□□ -2.28
RNU6-1250P-201ENST00000391218 FAM84AQ96KN4 292 aa0.82□□□□□ -2.28
RNU6-1250P-201ENST00000391218 PCDHGA10Q9Y5H3 936 aa0.82□□□□□ -2.28
RNU6-1250P-201ENST00000391218 PITPNM2Q9BZ72 1349 aa0.82□□□□□ -2.28
RNU6-1250P-201ENST00000391218 C3orf80F5H4A9 247 aa0.81□□□□□ -2.28
RNU6-1250P-201ENST00000391218 PAPLNO95428 1278 aa0.81□□□□□ -2.28
RNU6-1250P-201ENST00000391218 CELA3BP08861 270 aa0.81□□□□□ -2.28
RNU6-1250P-201ENST00000391218 FOXR1Q6PIV2 292 aa0.81□□□□□ -2.28
RNU6-1250P-201ENST00000391218 AMIGO3Q86WK7 504 aa0.81□□□□□ -2.28
RNU6-1250P-201ENST00000391218 ZFPM1Q8IX07 1006 aa0.81□□□□□ -2.28
RNU6-1250P-201ENST00000391218 BTBD6Q96KE9 485 aa0.81□□□□□ -2.28
RNU6-1250P-201ENST00000391218 CNTNAP4Q9C0A0 1308 aa0.81□□□□□ -2.28
RNU6-1250P-201ENST00000391218 AHNAKQ09666 5890 aaKnown RBP0.81□□□□□ -2.28
RNU6-1250P-201ENST00000391218 CAPNS1P04632 268 aa0.8□□□□□ -2.28
RNU6-1250P-201ENST00000391218 CHRM1P11229 460 aaPredicted RBP0.8□□□□□ -2.28
RNU6-1250P-201ENST00000391218 TNFRSF1AP19438 455 aa0.8□□□□□ -2.28
RNU6-1250P-201ENST00000391218 POU3F3P20264 500 aaPredicted RBP0.8□□□□□ -2.28
RNU6-1250P-201ENST00000391218 INHBCP55103 352 aa0.8□□□□□ -2.28
RNU6-1250P-201ENST00000391218 MESP2Q0VG99 397 aa0.8□□□□□ -2.28
RNU6-1250P-201ENST00000391218 MBTPS1Q14703 1052 aa0.8□□□□□ -2.28
RNU6-1250P-201ENST00000391218 GRIK4Q16099 956 aa0.8□□□□□ -2.28
RNU6-1250P-201ENST00000391218 TXNRD3Q86VQ6 643 aa0.8□□□□□ -2.28
RNU6-1250P-201ENST00000391218 EHBP1Q8NDI1 1231 aa0.8□□□□□ -2.28
RNU6-1250P-201ENST00000391218 BHLHE22Q8NFJ8 381 aaPredicted RBP0.8□□□□□ -2.28
RNU6-1250P-201ENST00000391218 ZNF837Q96EG3 531 aaPredicted RBP0.8□□□□□ -2.28
RNU6-1250P-201ENST00000391218 PARD6AQ9NPB6 346 aa0.8□□□□□ -2.28
RNU6-1250P-201ENST00000391218 PRDM9Q9NQV7 894 aa0.8□□□□□ -2.28
RNU6-1250P-201ENST00000391218 CARMIL2Q6F5E8 1435 aa0.8□□□□□ -2.28
RNU6-1250P-201ENST00000391218 AHNAK2Q8IVF2 5795 aa0.79□□□□□ -2.28
RNU6-1250P-201ENST00000391218 FOXK1P85037 733 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms