RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 ZNF800Q2TB10 664 aaPredicted RBP eCLIP1.74□□□□□ -2.13
SNORD28-201ENST00000384706 C4orf48Q5BLP8 95 aa1.74□□□□□ -2.13
SNORD28-201ENST00000384706 NUTM2DQ5VT03 806 aaPredicted RBP1.74□□□□□ -2.13
SNORD28-201ENST00000384706 GIGYF2Q6Y7W6 1299 aaKnown RBP1.74□□□□□ -2.13
SNORD28-201ENST00000384706 DHX30Q7L2E3 1194 aaKnown RBP eCLIP1.74□□□□□ -2.13
SNORD28-201ENST00000384706 VASH1Q7L8A9 365 aaPredicted RBP1.74□□□□□ -2.13
SNORD28-201ENST00000384706 NUTM2AQ8IVF1 878 aaPredicted RBP1.74□□□□□ -2.13
SNORD28-201ENST00000384706 SVOPQ8N4V2 548 aa1.74□□□□□ -2.13
SNORD28-201ENST00000384706 CABLES1Q8TDN4 633 aa1.74□□□□□ -2.13
SNORD28-201ENST00000384706 TSEN34Q9BSV6 310 aaKnown RBP1.74□□□□□ -2.13
SNORD28-201ENST00000384706 COL25A1Q9BXS0 654 aaPredicted RBP1.74□□□□□ -2.13
SNORD28-201ENST00000384706 TBC1D2Q9BYX2 928 aa1.74□□□□□ -2.13
SNORD28-201ENST00000384706 ZBTB3Q9H5J0 574 aa1.74□□□□□ -2.13
SNORD28-201ENST00000384706 DNMT3LQ9UJW3 386 aa1.74□□□□□ -2.13
SNORD28-201ENST00000384706 CDC14CA4D256 554 aa1.73□□□□□ -2.13
SNORD28-201ENST00000384706 F12P00748 615 aaPredicted RBP1.73□□□□□ -2.13
SNORD28-201ENST00000384706 IRS1P35568 1242 aa1.73□□□□□ -2.13
SNORD28-201ENST00000384706 MARSP56192 900 aaKnown RBP1.73□□□□□ -2.13
SNORD28-201ENST00000384706 CBLBQ13191 982 aa1.73□□□□□ -2.13
SNORD28-201ENST00000384706 DIXDC1Q155Q3 683 aa1.73□□□□□ -2.13
SNORD28-201ENST00000384706 PLA2G4EQ3MJ16 856 aa1.73□□□□□ -2.13
SNORD28-201ENST00000384706 RNFT1Q5M7Z0 435 aa1.73□□□□□ -2.13
SNORD28-201ENST00000384706 RSBN1LQ6PCB5 846 aaPredicted RBP1.73□□□□□ -2.13
SNORD28-201ENST00000384706 RIC3Q7Z5B4 369 aa1.73□□□□□ -2.13
SNORD28-201ENST00000384706 CCDC116Q8IYX3 515 aa1.73□□□□□ -2.13
SNORD28-201ENST00000384706 VWA5B2Q8N398 1253 aa1.73□□□□□ -2.13
SNORD28-201ENST00000384706 MEIOBQ8N635 442 aa1.73□□□□□ -2.13
SNORD28-201ENST00000384706 WHAMMQ8TF30 809 aa1.73□□□□□ -2.13
SNORD28-201ENST00000384706 CARD14Q9BXL6 1004 aa1.73□□□□□ -2.13
SNORD28-201ENST00000384706 EMILIN1Q9Y6C2 1016 aa1.73□□□□□ -2.13
SNORD28-201ENST00000384706 GJA5P36382 358 aa1.72□□□□□ -2.13
SNORD28-201ENST00000384706 AMHR2Q16671 573 aa1.72□□□□□ -2.13
SNORD28-201ENST00000384706 QPCTQ16769 361 aa1.72□□□□□ -2.13
SNORD28-201ENST00000384706 PPP1R26Q5T8A7 1209 aaPredicted RBP1.72□□□□□ -2.13
SNORD28-201ENST00000384706 NBPF14Q5TI25 921 aa1.72□□□□□ -2.13
SNORD28-201ENST00000384706 PRPF38BQ5VTL8 546 aaKnown RBP1.72□□□□□ -2.13
SNORD28-201ENST00000384706 ZNF385CQ66K41 422 aaPredicted RBP1.72□□□□□ -2.13
SNORD28-201ENST00000384706 BARGINQ6ZT62 677 aa1.72□□□□□ -2.13
SNORD28-201ENST00000384706 SV2AQ7L0J3 742 aa1.72□□□□□ -2.13
SNORD28-201ENST00000384706 CCDC155Q8N6L0 562 aa1.72□□□□□ -2.13
SNORD28-201ENST00000384706 ARMC2Q8NEN0 867 aa1.72□□□□□ -2.13
SNORD28-201ENST00000384706 AGBL1Q96MI9 1066 aa1.72□□□□□ -2.13
SNORD28-201ENST00000384706 INSM2Q96T92 566 aaPredicted RBP1.72□□□□□ -2.13
SNORD28-201ENST00000384706 ZNF395Q9H8N7 513 aaPredicted RBP1.72□□□□□ -2.13
SNORD28-201ENST00000384706 PGPEP1Q9NXJ5 209 aa1.72□□□□□ -2.13
SNORD28-201ENST00000384706 SLC35F4A4IF30 521 aa1.71□□□□□ -2.14
SNORD28-201ENST00000384706 TRIM66O15016 1216 aa1.71□□□□□ -2.14
SNORD28-201ENST00000384706 SPINT1O43278 529 aa1.71□□□□□ -2.14
SNORD28-201ENST00000384706 ZMYND10O75800 440 aa1.71□□□□□ -2.14
SNORD28-201ENST00000384706 ARHGEF15O94989 841 aa1.71□□□□□ -2.14
SNORD28-201ENST00000384706 ADAMTS2O95450 1211 aa1.71□□□□□ -2.14
SNORD28-201ENST00000384706 ITGA6P23229 1130 aa1.71□□□□□ -2.14
SNORD28-201ENST00000384706 CTSOP43234 321 aaPredicted RBP1.71□□□□□ -2.14
SNORD28-201ENST00000384706 RAB15P59190 212 aa1.71□□□□□ -2.14
SNORD28-201ENST00000384706 RELBQ01201 579 aa1.71□□□□□ -2.14
SNORD28-201ENST00000384706 ERFEQ4G0M1 354 aa1.71□□□□□ -2.14
SNORD28-201ENST00000384706 RTL5Q5HYW3 569 aaPredicted RBP1.71□□□□□ -2.14
SNORD28-201ENST00000384706 Q6ZVU0 165 aa1.71□□□□□ -2.14
SNORD28-201ENST00000384706 SH3BP5LQ7L8J4 393 aa1.71□□□□□ -2.14
SNORD28-201ENST00000384706 SH3RF1Q7Z6J0 888 aa1.71□□□□□ -2.14
SNORD28-201ENST00000384706 ZBTB33Q86T24 672 aa1.71□□□□□ -2.14
SNORD28-201ENST00000384706 PARP9Q8IXQ6 854 aa1.71□□□□□ -2.14
SNORD28-201ENST00000384706 VSIG10Q8N0Z9 540 aa1.71□□□□□ -2.14
SNORD28-201ENST00000384706 HELBQ8NG08 1087 aaPredicted RBP1.71□□□□□ -2.14
SNORD28-201ENST00000384706 ZC3H15Q8WU90 426 aaKnown RBP1.71□□□□□ -2.14
SNORD28-201ENST00000384706 NANOS1Q8WY41 292 aaKnown RBP1.71□□□□□ -2.14
SNORD28-201ENST00000384706 SCARF2Q96GP6 870 aaPredicted RBP1.71□□□□□ -2.14
SNORD28-201ENST00000384706 KCTD15Q96SI1 283 aaPredicted RBP1.71□□□□□ -2.14
SNORD28-201ENST00000384706 C1QTNF2Q9BXJ5 285 aa1.71□□□□□ -2.14
SNORD28-201ENST00000384706 POLMQ9NP87 494 aaPredicted RBP1.71□□□□□ -2.14
SNORD28-201ENST00000384706 LIMD1Q9UGP4 676 aa1.71□□□□□ -2.14
SNORD28-201ENST00000384706 ATP1B4Q9UN42 357 aaPredicted RBP1.71□□□□□ -2.14
SNORD28-201ENST00000384706 MAP4K5Q9Y4K4 846 aa1.71□□□□□ -2.14
SNORD28-201ENST00000384706 LILRB3O75022 631 aa1.7□□□□□ -2.14
SNORD28-201ENST00000384706 SLURP2P0DP57 97 aa1.7□□□□□ -2.14
SNORD28-201ENST00000384706 MAP3K10Q02779 954 aa1.7□□□□□ -2.14
SNORD28-201ENST00000384706 CTDSPL2Q05D32 466 aa1.7□□□□□ -2.14
SNORD28-201ENST00000384706 DHX9Q08211 1270 aaKnown RBP1.7□□□□□ -2.14
SNORD28-201ENST00000384706 MYSM1Q5VVJ2 828 aa1.7□□□□□ -2.14
SNORD28-201ENST00000384706 LYPD4Q6UWN0 246 aa1.7□□□□□ -2.14
SNORD28-201ENST00000384706 TRMT44Q8IYL2 757 aaKnown RBP1.7□□□□□ -2.14
SNORD28-201ENST00000384706 SLC10A4Q96EP9 437 aa1.7□□□□□ -2.14
SNORD28-201ENST00000384706 ARHGAP9Q9BRR9 750 aa1.7□□□□□ -2.14
SNORD28-201ENST00000384706 ENAMQ9NRM1 1142 aa1.7□□□□□ -2.14
SNORD28-201ENST00000384706 TMPRSS4Q9NRS4 437 aa1.7□□□□□ -2.14
SNORD28-201ENST00000384706 POLR3EQ9NVU0 708 aa1.7□□□□□ -2.14
SNORD28-201ENST00000384706 CNTNAP5Q8WYK1 1306 aa1.69□□□□□ -2.14
SNORD28-201ENST00000384706 SENP3-EIF4A1A0A087X0R7 540 aa1.69□□□□□ -2.14
SNORD28-201ENST00000384706 GPR25O00155 361 aa1.69□□□□□ -2.14
SNORD28-201ENST00000384706 CELA2BP08218 269 aaPredicted RBP1.69□□□□□ -2.14
SNORD28-201ENST00000384706 RHOQP17081 205 aa1.69□□□□□ -2.14
SNORD28-201ENST00000384706 ADD1P35611 737 aaKnown RBP1.69□□□□□ -2.14
SNORD28-201ENST00000384706 SRSF11Q05519 484 aaKnown RBP1.69□□□□□ -2.14
SNORD28-201ENST00000384706 LAMC2Q13753 1193 aa1.69□□□□□ -2.14
SNORD28-201ENST00000384706 INTS6LQ5JSJ4 861 aaKnown RBP1.69□□□□□ -2.14
SNORD28-201ENST00000384706 PDXDC2PQ6P474 469 aa1.69□□□□□ -2.14
SNORD28-201ENST00000384706 RIPOR1Q6ZS17 1223 aa1.69□□□□□ -2.14
SNORD28-201ENST00000384706 LYSMD3Q7Z3D4 306 aa1.69□□□□□ -2.14
SNORD28-201ENST00000384706 PRICKLE2Q7Z3G6 844 aa1.69□□□□□ -2.14
SNORD28-201ENST00000384706 BEND7Q8N7W2 519 aaPredicted RBP1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms