RNA–Protein interactions for RNA: ENST00000384433.1

RNU6-549P-201, Transcript of RNA, U6 small nuclear 549, pseudogene, humanhuman

BASIC

Gene RNU6-549P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-549P-201ENST00000384433 PLEKHM2Q8IWE5 1019 aa8.35□□□□□ -1.07
RNU6-549P-201ENST00000384433 MKRN1Q9UHC7 482 aaKnown RBP8.35□□□□□ -1.07
RNU6-549P-201ENST00000384433 CHIC2Q9UKJ5 165 aa8.35□□□□□ -1.07
RNU6-549P-201ENST00000384433 ZMIZ1Q9ULJ6 1067 aa8.35□□□□□ -1.07
RNU6-549P-201ENST00000384433 CRTC2Q53ET0 693 aaPredicted RBP8.34□□□□□ -1.07
RNU6-549P-201ENST00000384433 BPHLQ86WA6 291 aaPredicted RBP8.34□□□□□ -1.07
RNU6-549P-201ENST00000384433 STK32AQ8WU08 396 aa8.34□□□□□ -1.07
RNU6-549P-201ENST00000384433 ZBTB7CA1YPR0 619 aa8.33□□□□□ -1.08
RNU6-549P-201ENST00000384433 MCCD1P59942 119 aaPredicted RBP8.33□□□□□ -1.08
RNU6-549P-201ENST00000384433 CDCA7Q9BWT1 371 aaPredicted RBP8.33□□□□□ -1.08
RNU6-549P-201ENST00000384433 C1QTNF2Q9BXJ5 285 aa8.33□□□□□ -1.08
RNU6-549P-201ENST00000384433 TRIM32Q13049 653 aa8.32□□□□□ -1.08
RNU6-549P-201ENST00000384433 TMEM164Q5U3C3 297 aa8.32□□□□□ -1.08
RNU6-549P-201ENST00000384433 PPP1R18Q6NYC8 613 aa8.32□□□□□ -1.08
RNU6-549P-201ENST00000384433 EMID1Q96A84 441 aaPredicted RBP8.32□□□□□ -1.08
RNU6-549P-201ENST00000384433 SLAIN2Q9P270 581 aa8.31□□□□□ -1.08
RNU6-549P-201ENST00000384433 NOVA2Q9UNW9 492 aaKnown RBP8.31□□□□□ -1.08
RNU6-549P-201ENST00000384433 USTQ9Y2C2 406 aa8.31□□□□□ -1.08
RNU6-549P-201ENST00000384433 RASA1P20936 1047 aa8.3□□□□□ -1.08
RNU6-549P-201ENST00000384433 CLDN10P78369 228 aa8.3□□□□□ -1.08
RNU6-549P-201ENST00000384433 PTK7Q13308 1070 aa8.3□□□□□ -1.08
RNU6-549P-201ENST00000384433 KCTD17Q8N5Z5 321 aa8.3□□□□□ -1.08
RNU6-549P-201ENST00000384433 ANKLE1Q8NAG6 615 aa8.3□□□□□ -1.08
RNU6-549P-201ENST00000384433 ESPNB1AK53 854 aa8.29□□□□□ -1.08
RNU6-549P-201ENST00000384433 USP17L15C9J2P7 530 aa8.29□□□□□ -1.08
RNU6-549P-201ENST00000384433 USP17L10C9JJH3 530 aa8.29□□□□□ -1.08
RNU6-549P-201ENST00000384433 USP17L13C9JLJ4 530 aa8.29□□□□□ -1.08
RNU6-549P-201ENST00000384433 USP17L12C9JPN9 530 aa8.29□□□□□ -1.08
RNU6-549P-201ENST00000384433 USP17L11C9JVI0 530 aa8.29□□□□□ -1.08
RNU6-549P-201ENST00000384433 USP17L21D6R901 530 aa8.29□□□□□ -1.08
RNU6-549P-201ENST00000384433 USP17L18D6R9N7 530 aa8.29□□□□□ -1.08
RNU6-549P-201ENST00000384433 USP17L22D6RA61 530 aa8.29□□□□□ -1.08
RNU6-549P-201ENST00000384433 USP17L17D6RBQ6 530 aa8.29□□□□□ -1.08
RNU6-549P-201ENST00000384433 USP17L19D6RCP7 530 aa8.29□□□□□ -1.08
RNU6-549P-201ENST00000384433 USP17L20D6RJB6 530 aa8.29□□□□□ -1.08
RNU6-549P-201ENST00000384433 USP17L24Q0WX57 530 aa8.29□□□□□ -1.08
RNU6-549P-201ENST00000384433 OXLD1Q5BKU9 147 aa8.29□□□□□ -1.08
RNU6-549P-201ENST00000384433 LIAT1Q6ZQX7 453 aa8.29□□□□□ -1.08
RNU6-549P-201ENST00000384433 SLC10A4Q96EP9 437 aa8.29□□□□□ -1.08
RNU6-549P-201ENST00000384433 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.29□□□□□ -1.08
RNU6-549P-201ENST00000384433 KIAA1024Q9UPX6 916 aa8.29□□□□□ -1.08
RNU6-549P-201ENST00000384433 ZBTB7BO15156 539 aaPredicted RBP8.28□□□□□ -1.08
RNU6-549P-201ENST00000384433 ZBTB24O43167 697 aaPredicted RBP8.28□□□□□ -1.08
RNU6-549P-201ENST00000384433 RAB15P59190 212 aa8.28□□□□□ -1.08
RNU6-549P-201ENST00000384433 ELOAQ14241 798 aaKnown RBP8.28□□□□□ -1.08
RNU6-549P-201ENST00000384433 OGFOD1Q8N543 542 aa8.28□□□□□ -1.08
RNU6-549P-201ENST00000384433 DOLKQ9UPQ8 538 aa8.28□□□□□ -1.08
RNU6-549P-201ENST00000384433 FAM196BA6NMK8 535 aa8.27□□□□□ -1.09
RNU6-549P-201ENST00000384433 DKK1O94907 266 aa8.27□□□□□ -1.09
RNU6-549P-201ENST00000384433 FAM69CQ0P6D2 419 aa8.27□□□□□ -1.09
RNU6-549P-201ENST00000384433 EML3Q32P44 896 aa8.27□□□□□ -1.09
RNU6-549P-201ENST00000384433 MAP7D1Q3KQU3 841 aa8.27□□□□□ -1.09
RNU6-549P-201ENST00000384433 TRMT44Q8IYL2 757 aaKnown RBP8.27□□□□□ -1.09
RNU6-549P-201ENST00000384433 ZNF592Q92610 1267 aa8.27□□□□□ -1.09
RNU6-549P-201ENST00000384433 ZNF594Q96JF6 807 aaPredicted RBP8.27□□□□□ -1.09
RNU6-549P-201ENST00000384433 GZF1Q9H116 711 aaPredicted RBP8.27□□□□□ -1.09
RNU6-549P-201ENST00000384433 LARP1Q6PKG0 1096 aaKnown RBP8.26□□□□□ -1.09
RNU6-549P-201ENST00000384433 KCTD15Q96SI1 283 aaPredicted RBP8.26□□□□□ -1.09
RNU6-549P-201ENST00000384433 PCDHB11Q9Y5F2 797 aa8.26□□□□□ -1.09
RNU6-549P-201ENST00000384433 ATP5J2-PTCD1G3V325 749 aa8.25□□□□□ -1.09
RNU6-549P-201ENST00000384433 BRD1O95696 1058 aa8.25□□□□□ -1.09
RNU6-549P-201ENST00000384433 PDE4CQ08493 712 aa8.25□□□□□ -1.09
RNU6-549P-201ENST00000384433 DPYDQ12882 1025 aa8.25□□□□□ -1.09
RNU6-549P-201ENST00000384433 ANKMY2Q8IV38 441 aa8.25□□□□□ -1.09
RNU6-549P-201ENST00000384433 LZTS3O60299 673 aaPredicted RBP8.24□□□□□ -1.09
RNU6-549P-201ENST00000384433 LGR5O75473 907 aa8.24□□□□□ -1.09
RNU6-549P-201ENST00000384433 GGCXP38435 758 aa8.24□□□□□ -1.09
RNU6-549P-201ENST00000384433 SCTRP47872 440 aa8.24□□□□□ -1.09
RNU6-549P-201ENST00000384433 WNT7BP56706 349 aa8.24□□□□□ -1.09
RNU6-549P-201ENST00000384433 INTS6LQ5JSJ4 861 aaKnown RBP8.24□□□□□ -1.09
RNU6-549P-201ENST00000384433 RC3H1Q5TC82 1133 aaKnown RBP8.24□□□□□ -1.09
RNU6-549P-201ENST00000384433 PHLDB3Q6NSJ2 640 aa8.24□□□□□ -1.09
RNU6-549P-201ENST00000384433 DNAAF2Q9NVR5 837 aaKnown RBP8.24□□□□□ -1.09
RNU6-549P-201ENST00000384433 NOD1Q9Y239 953 aa8.24□□□□□ -1.09
RNU6-549P-201ENST00000384433 PCDHGA11Q9Y5H2 935 aa8.24□□□□□ -1.09
RNU6-549P-201ENST00000384433 VARSP26640 1264 aaKnown RBP8.23□□□□□ -1.09
RNU6-549P-201ENST00000384433 SCNN1AP37088 669 aa8.23□□□□□ -1.09
RNU6-549P-201ENST00000384433 RPIAP49247 311 aa8.23□□□□□ -1.09
RNU6-549P-201ENST00000384433 GTF2IP78347 998 aa8.23□□□□□ -1.09
RNU6-549P-201ENST00000384433 MMRN1Q13201 1228 aa8.23□□□□□ -1.09
RNU6-549P-201ENST00000384433 ARID5BQ14865 1188 aa8.23□□□□□ -1.09
RNU6-549P-201ENST00000384433 FAM200AQ8TCP9 573 aa8.23□□□□□ -1.09
RNU6-549P-201ENST00000384433 TLL2Q9Y6L7 1015 aa8.23□□□□□ -1.09
RNU6-549P-201ENST00000384433 SFI1A8K8P3 1242 aa8.22□□□□□ -1.09
RNU6-549P-201ENST00000384433 ERVH48-1M5A8F1 160 aa8.22□□□□□ -1.09
RNU6-549P-201ENST00000384433 GRM5P41594 1212 aa8.22□□□□□ -1.09
RNU6-549P-201ENST00000384433 NBPF20Q3BBV1 942 aa8.22□□□□□ -1.09
RNU6-549P-201ENST00000384433 RNF20Q5VTR2 975 aa8.22□□□□□ -1.09
RNU6-549P-201ENST00000384433 VASH1Q7L8A9 365 aaPredicted RBP8.22□□□□□ -1.09
RNU6-549P-201ENST00000384433 TMPRSS4Q9NRS4 437 aa8.22□□□□□ -1.09
RNU6-549P-201ENST00000384433 PCDH10Q9P2E7 1040 aa8.22□□□□□ -1.09
RNU6-549P-201ENST00000384433 SIAH2O43255 324 aa8.21□□□□□ -1.1
RNU6-549P-201ENST00000384433 STAU1O95793 577 aaKnown RBP8.21□□□□□ -1.1
RNU6-549P-201ENST00000384433 EHBP1Q8NDI1 1231 aa8.21□□□□□ -1.1
RNU6-549P-201ENST00000384433 KCNA1Q09470 495 aa8.2□□□□□ -1.1
RNU6-549P-201ENST00000384433 TRIM50Q86XT4 487 aa8.2□□□□□ -1.1
RNU6-549P-201ENST00000384433 LARGE2Q8N3Y3 721 aa8.2□□□□□ -1.1
RNU6-549P-201ENST00000384433 TPCN2Q8NHX9 752 aa8.2□□□□□ -1.1
RNU6-549P-201ENST00000384433 IVNS1ABPQ9Y6Y0 642 aa8.2□□□□□ -1.1
RNU6-549P-201ENST00000384433 CD2BP2O95400 341 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms