RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 CCDC181Q5TID7 509 aa20.25■□□□□ 0.83
SNAPC3-202ENST00000380821 SPATA32Q96LK8 384 aa20.25■□□□□ 0.83
SNAPC3-202ENST00000380821 ARHGAP5Q13017 1502 aa20.24■□□□□ 0.83
SNAPC3-202ENST00000380821 ZFYVE27Q5T4F4 411 aa20.24■□□□□ 0.83
SNAPC3-202ENST00000380821 CEP57L1Q8IYX8 460 aa20.24■□□□□ 0.83
SNAPC3-202ENST00000380821 CFAP45Q9UL16 551 aa20.24■□□□□ 0.83
SNAPC3-202ENST00000380821 GOLGA6L7A0A1B0GV03 622 aa20.24■□□□□ 0.83
SNAPC3-202ENST00000380821 USP8P40818 1118 aa20.24■□□□□ 0.83
SNAPC3-202ENST00000380821 ZRSR2Q15696 482 aaKnown RBP20.24■□□□□ 0.83
SNAPC3-202ENST00000380821 CCAR1Q8IX12 1150 aaKnown RBP20.24■□□□□ 0.83
SNAPC3-202ENST00000380821 TSR2Q969E8 191 aaKnown RBP20.24■□□□□ 0.83
SNAPC3-202ENST00000380821 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.24■□□□□ 0.832e-6■■■■■ 149.1
SNAPC3-202ENST00000380821 CCDC158Q5M9N0 1113 aa20.24■□□□□ 0.83
SNAPC3-202ENST00000380821 PPP6R1Q9UPN7 881 aa20.23■□□□□ 0.83
SNAPC3-202ENST00000380821 PLEKHH2Q8IVE3 1493 aa20.23■□□□□ 0.83
SNAPC3-202ENST00000380821 EFCAB5A4FU69 1503 aa20.23■□□□□ 0.83
SNAPC3-202ENST00000380821 PDRG1Q9NUG6 133 aa20.23■□□□□ 0.83
SNAPC3-202ENST00000380821 SMTNL1A8MU46 457 aa20.23■□□□□ 0.83
SNAPC3-202ENST00000380821 KDM4AO75164 1064 aa20.23■□□□□ 0.83
SNAPC3-202ENST00000380821 KIF2AO00139 706 aaPredicted RBP20.22■□□□□ 0.83
SNAPC3-202ENST00000380821 SYCP1Q15431 976 aa20.22■□□□□ 0.83
SNAPC3-202ENST00000380821 SKIDA1Q1XH10 827 aa20.22■□□□□ 0.83
SNAPC3-202ENST00000380821 PLEKHO1Q53GL0 409 aaPredicted RBP20.22■□□□□ 0.83
SNAPC3-202ENST00000380821 SLC4A2P04920 1241 aa20.22■□□□□ 0.83
SNAPC3-202ENST00000380821 TRIM22Q8IYM9 498 aa20.21■□□□□ 0.83
SNAPC3-202ENST00000380821 STK3Q13188 491 aa20.21■□□□□ 0.83
SNAPC3-202ENST00000380821 SYTL4Q96C24 671 aaPredicted RBP20.21■□□□□ 0.83
SNAPC3-202ENST00000380821 ZNF428Q96B54 188 aa20.2■□□□□ 0.82
SNAPC3-202ENST00000380821 ATP2B1P20020 1258 aa20.2■□□□□ 0.82
SNAPC3-202ENST00000380821 CDKL5O76039 1030 aa20.2■□□□□ 0.82
SNAPC3-202ENST00000380821 MAPK8IP2Q13387 824 aaPredicted RBP20.2■□□□□ 0.82
SNAPC3-202ENST00000380821 DEF6Q9H4E7 631 aa20.2■□□□□ 0.82
SNAPC3-202ENST00000380821 KIF6Q6ZMV9 814 aa20.2■□□□□ 0.82
SNAPC3-202ENST00000380821 TMEM132EQ6IEE7 984 aa20.19■□□□□ 0.82
SNAPC3-202ENST00000380821 UPF3BQ9BZI7 483 aaKnown RBP20.18■□□□□ 0.82
SNAPC3-202ENST00000380821 KRT32Q14532 448 aa20.18■□□□□ 0.82
SNAPC3-202ENST00000380821 NOL7Q9UMY1 257 aaKnown RBP20.18■□□□□ 0.82
SNAPC3-202ENST00000380821 CCDC69A6NI79 296 aa20.18■□□□□ 0.82
SNAPC3-202ENST00000380821 KRT18P05783 430 aaKnown RBP20.18■□□□□ 0.82
SNAPC3-202ENST00000380821 BLOC1S2Q6QNY1 142 aa20.18■□□□□ 0.82
SNAPC3-202ENST00000380821 ARAP1Q96P48 1450 aa20.18■□□□□ 0.82
SNAPC3-202ENST00000380821 MAP3K11Q16584 847 aa20.18■□□□□ 0.82
SNAPC3-202ENST00000380821 PLEKHH1Q9ULM0 1364 aa20.17■□□□□ 0.82
SNAPC3-202ENST00000380821 CFAP70Q5T0N1 1121 aa20.17■□□□□ 0.82
SNAPC3-202ENST00000380821 ZSCAN25Q6NSZ9 544 aa20.17■□□□□ 0.82
SNAPC3-202ENST00000380821 RAD54L2Q9Y4B4 1467 aa20.17■□□□□ 0.82
SNAPC3-202ENST00000380821 CFTRP13569 1480 aa20.17■□□□□ 0.82
SNAPC3-202ENST00000380821 MSH5O43196 834 aa20.17■□□□□ 0.82
SNAPC3-202ENST00000380821 ANKRD18AQ8IVF6 992 aa20.16■□□□□ 0.82
SNAPC3-202ENST00000380821 RPAP2Q8IXW5 612 aaPredicted RBP20.16■□□□□ 0.82
SNAPC3-202ENST00000380821 WDR97A6NE52 1622 aa20.16■□□□□ 0.82
SNAPC3-202ENST00000380821 HSP90AB3PQ58FF7 597 aa20.16■□□□□ 0.82
SNAPC3-202ENST00000380821 NLRP2Q9NX02 1062 aa20.16■□□□□ 0.82
SNAPC3-202ENST00000380821 NLRP6P59044 892 aa20.16■□□□□ 0.82
SNAPC3-202ENST00000380821 SLFN5Q08AF3 891 aa20.16■□□□□ 0.82
SNAPC3-202ENST00000380821 NACAP1Q9BZK3 213 aa20.16■□□□□ 0.82
SNAPC3-202ENST00000380821 GBP3Q9H0R5 595 aa20.16■□□□□ 0.82
SNAPC3-202ENST00000380821 POLA1P09884 1462 aaPredicted RBP20.15■□□□□ 0.82
SNAPC3-202ENST00000380821 SYCE3A1L190 88 aa20.15■□□□□ 0.82
SNAPC3-202ENST00000380821 JAKMIP1Q96N16 626 aaKnown RBP20.15■□□□□ 0.82
SNAPC3-202ENST00000380821 HDGFL1Q5TGJ6 251 aa20.15■□□□□ 0.82
SNAPC3-202ENST00000380821 NBPF8Q3BBV2 869 aa20.14■□□□□ 0.81
SNAPC3-202ENST00000380821 GNL3LQ9NVN8 582 aaKnown RBP20.14■□□□□ 0.81
SNAPC3-202ENST00000380821 FBXO3Q9UK99 471 aa20.14■□□□□ 0.81
SNAPC3-202ENST00000380821 GPRASP1Q5JY77 1395 aa20.13■□□□□ 0.81
SNAPC3-202ENST00000380821 MAP4K4O95819 1239 aaPredicted RBP20.13■□□□□ 0.81
SNAPC3-202ENST00000380821 CCDC183Q5T5S1 534 aa20.13■□□□□ 0.81
SNAPC3-202ENST00000380821 CCDC148Q8NFR7 591 aa20.13■□□□□ 0.81
SNAPC3-202ENST00000380821 C9orf84Q5VXU9 1444 aa20.13■□□□□ 0.81
SNAPC3-202ENST00000380821 CCDC57Q2TAC2 916 aa20.13■□□□□ 0.81
SNAPC3-202ENST00000380821 TMCO3Q6UWJ1 677 aa20.13■□□□□ 0.81
SNAPC3-202ENST00000380821 UBXN4Q92575 508 aa20.13■□□□□ 0.81
SNAPC3-202ENST00000380821 CTNNA3Q9UI47 895 aa20.13■□□□□ 0.81
SNAPC3-202ENST00000380821 MTMR7Q9Y216 660 aa20.13■□□□□ 0.81
SNAPC3-202ENST00000380821 TIAM1Q13009 1591 aa20.13■□□□□ 0.81
SNAPC3-202ENST00000380821 NBPF1Q3BBV0 1214 aa20.13■□□□□ 0.81
SNAPC3-202ENST00000380821 MPNDQ8N594 471 aa20.13■□□□□ 0.81
SNAPC3-202ENST00000380821 HECW1Q76N89 1606 aa20.13■□□□□ 0.81
SNAPC3-202ENST00000380821 FAM177A1Q8N128 213 aaPredicted RBP20.12■□□□□ 0.81
SNAPC3-202ENST00000380821 WASF1Q92558 559 aa20.12■□□□□ 0.81
SNAPC3-202ENST00000380821 ANKRD30BQ9BXX2 1392 aa20.12■□□□□ 0.81
SNAPC3-202ENST00000380821 ZMYND15Q9H091 742 aa20.12■□□□□ 0.81
SNAPC3-202ENST00000380821 CCDC102AQ96A19 550 aa20.12■□□□□ 0.81
SNAPC3-202ENST00000380821 CGNQ9P2M7 1197 aaKnown RBP20.12■□□□□ 0.81
SNAPC3-202ENST00000380821 SEPT7Q16181 437 aaKnown RBP20.12■□□□□ 0.81
SNAPC3-202ENST00000380821 CNNM1Q9NRU3 951 aa20.11■□□□□ 0.81
SNAPC3-202ENST00000380821 ZSCAN12O43309 604 aa20.11■□□□□ 0.81
SNAPC3-202ENST00000380821 AACSQ86V21 672 aa20.11■□□□□ 0.81
SNAPC3-202ENST00000380821 PLCD4Q9BRC7 762 aa20.11■□□□□ 0.81
SNAPC3-202ENST00000380821 TANGO6Q9C0B7 1094 aa20.11■□□□□ 0.81
SNAPC3-202ENST00000380821 IKQ13123 557 aaPredicted RBP20.11■□□□□ 0.81
SNAPC3-202ENST00000380821 EPB41L2O43491 1005 aaKnown RBP20.1■□□□□ 0.81
SNAPC3-202ENST00000380821 SUPT6HQ7KZ85 1726 aaKnown RBP20.1■□□□□ 0.81
SNAPC3-202ENST00000380821 NEFHP12036 1026 aa20.1■□□□□ 0.81
SNAPC3-202ENST00000380821 FAM193AP78312 1265 aa20.09■□□□□ 0.81
SNAPC3-202ENST00000380821 PTPN14Q15678 1187 aa20.09■□□□□ 0.81
SNAPC3-202ENST00000380821 ZNF692Q9BU19 519 aaPredicted RBP20.09■□□□□ 0.81
SNAPC3-202ENST00000380821 ERICH4A6NGS2 130 aa20.09■□□□□ 0.81
SNAPC3-202ENST00000380821 ENOX2Q16206 610 aaKnown RBP20.09■□□□□ 0.81
SNAPC3-202ENST00000380821 CEP131Q9UPN4 1083 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms