RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 CCDC125Q86Z20 511 aa19.9■□□□□ 0.78
CLCN6-203ENST00000376490 ANKRD36BQ8N2N9 1353 aa19.9■□□□□ 0.78
CLCN6-203ENST00000376490 MYOM1P52179 1685 aa19.9■□□□□ 0.78
CLCN6-203ENST00000376490 HSPA5P11021 654 aaKnown RBP19.89■□□□□ 0.77
CLCN6-203ENST00000376490 EIF4G2P78344 907 aaKnown RBP eCLIP19.89■□□□□ 0.77
CLCN6-203ENST00000376490 BARGINQ6ZT62 677 aa19.89■□□□□ 0.77
CLCN6-203ENST00000376490 TCP11L2Q8N4U5 519 aa19.89■□□□□ 0.77
CLCN6-203ENST00000376490 EP400Q96L91 3159 aa19.88■□□□□ 0.77
CLCN6-203ENST00000376490 CRB1P82279 1406 aa19.87■□□□□ 0.77
CLCN6-203ENST00000376490 TOM1L2Q6ZVM7 507 aa19.87■□□□□ 0.77
CLCN6-203ENST00000376490 OVOS2A0A0J9YW53 1432 aa19.86■□□□□ 0.77
CLCN6-203ENST00000376490 OVOS2Q6IE36 1432 aa19.86■□□□□ 0.77
CLCN6-203ENST00000376490 THRAP3Q9Y2W1 955 aaKnown RBP19.86■□□□□ 0.77
CLCN6-203ENST00000376490 WDR17Q8IZU2 1322 aa19.85■□□□□ 0.77
CLCN6-203ENST00000376490 POLR3GLQ9BT43 218 aa19.85■□□□□ 0.77
CLCN6-203ENST00000376490 KIF20BQ96Q89 1820 aa19.85■□□□□ 0.77
CLCN6-203ENST00000376490 FYB1O15117 783 aa19.84■□□□□ 0.77
CLCN6-203ENST00000376490 FBLN1P23142 703 aa19.84■□□□□ 0.77
CLCN6-203ENST00000376490 COG3Q96JB2 828 aa19.84■□□□□ 0.77
CLCN6-203ENST00000376490 CARD14Q9BXL6 1004 aa19.84■□□□□ 0.77
CLCN6-203ENST00000376490 BLMP54132 1417 aaPredicted RBP19.84■□□□□ 0.77
CLCN6-203ENST00000376490 WNK3Q9BYP7 1800 aa19.83■□□□□ 0.77
CLCN6-203ENST00000376490 PARP4Q9UKK3 1724 aaKnown RBP19.83■□□□□ 0.77
CLCN6-203ENST00000376490 CSB-PGBD3P0DP91 1061 aa19.83■□□□□ 0.77
CLCN6-203ENST00000376490 GGNBP2Q9H3C7 697 aa19.83■□□□□ 0.77
CLCN6-203ENST00000376490 PDE3BQ13370 1112 aa19.82■□□□□ 0.76
CLCN6-203ENST00000376490 ABCC6O95255 1503 aa19.81■□□□□ 0.76
CLCN6-203ENST00000376490 SF3B2Q13435 895 aaKnown RBP19.8■□□□□ 0.76
CLCN6-203ENST00000376490 DEFB132Q7Z7B7 95 aa19.8■□□□□ 0.76
CLCN6-203ENST00000376490 CARD10Q9BWT7 1032 aa19.8■□□□□ 0.76
CLCN6-203ENST00000376490 RGPD1P0DJD0 1748 aa19.79■□□□□ 0.76
CLCN6-203ENST00000376490 C11orf95C9JLR9 678 aaPredicted RBP19.78■□□□□ 0.76
CLCN6-203ENST00000376490 FAM196AQ6ZSG2 479 aa19.78■□□□□ 0.76
CLCN6-203ENST00000376490 IP6K1Q92551 441 aa19.78■□□□□ 0.76
CLCN6-203ENST00000376490 RGPD2P0DJD1 1756 aa19.78■□□□□ 0.76
CLCN6-203ENST00000376490 ANKRD24Q8TF21 1146 aa19.77■□□□□ 0.76
CLCN6-203ENST00000376490 MAP3K19Q56UN5 1328 aa19.76■□□□□ 0.75
CLCN6-203ENST00000376490 NSD3Q9BZ95 1437 aa19.76■□□□□ 0.75
CLCN6-203ENST00000376490 NLRP2Q9NX02 1062 aa19.76■□□□□ 0.75
CLCN6-203ENST00000376490 MAP2P11137 1827 aaKnown RBP19.76■□□□□ 0.75
CLCN6-203ENST00000376490 SBF2Q86WG5 1849 aa19.76■□□□□ 0.75
CLCN6-203ENST00000376490 TNS1Q9HBL0 1735 aaKnown RBP19.76■□□□□ 0.75
CLCN6-203ENST00000376490 LRRC37A3O60309 1634 aa19.76■□□□□ 0.75
CLCN6-203ENST00000376490 ERBB3P21860 1342 aa19.76■□□□□ 0.75
CLCN6-203ENST00000376490 TRIM37O94972 964 aa19.75■□□□□ 0.75
CLCN6-203ENST00000376490 DDB1Q16531 1140 aa19.75■□□□□ 0.75
CLCN6-203ENST00000376490 AMPHP49418 695 aa19.74■□□□□ 0.75
CLCN6-203ENST00000376490 RRS1Q15050 365 aaKnown RBP19.74■□□□□ 0.75
CLCN6-203ENST00000376490 LTV1Q96GA3 475 aaPredicted RBP19.74■□□□□ 0.75
CLCN6-203ENST00000376490 CCDC7Q96M83 1385 aa19.73■□□□□ 0.75
CLCN6-203ENST00000376490 HOXC9P31274 260 aa19.73■□□□□ 0.75
CLCN6-203ENST00000376490 CDCA7Q9BWT1 371 aaPredicted RBP19.73■□□□□ 0.75
CLCN6-203ENST00000376490 BAG6P46379 1132 aa19.72■□□□□ 0.75
CLCN6-203ENST00000376490 PEAK1Q9H792 1746 aa19.72■□□□□ 0.75
CLCN6-203ENST00000376490 KAT6BQ8WYB5 2073 aa19.72■□□□□ 0.75
CLCN6-203ENST00000376490 DISP2A7MBM2 1401 aa19.71■□□□□ 0.75
CLCN6-203ENST00000376490 EN1Q05925 392 aaPredicted RBP19.71■□□□□ 0.75
CLCN6-203ENST00000376490 PANK3Q9H999 370 aa19.71■□□□□ 0.75
CLCN6-203ENST00000376490 FAM208AQ9UK61 1670 aaKnown RBP19.71■□□□□ 0.75
CLCN6-203ENST00000376490 EXOC5O00471 708 aa19.7■□□□□ 0.74
CLCN6-203ENST00000376490 MARCH10Q8NA82 808 aaPredicted RBP19.7■□□□□ 0.74
CLCN6-203ENST00000376490 CGNL1Q0VF96 1302 aa19.69■□□□□ 0.74
CLCN6-203ENST00000376490 ANKRD26Q9UPS8 1709 aa19.68■□□□□ 0.74
CLCN6-203ENST00000376490 APBA3O96018 575 aa19.67■□□□□ 0.74
CLCN6-203ENST00000376490 IL2RBP14784 551 aa19.67■□□□□ 0.74
CLCN6-203ENST00000376490 OVOS2A0A0G2JMS6 1433 aa19.66■□□□□ 0.74
CLCN6-203ENST00000376490 EZH2Q15910 746 aaKnown RBP19.65■□□□□ 0.74
CLCN6-203ENST00000376490 HSP90AB2PQ58FF8 381 aa19.65■□□□□ 0.74
CLCN6-203ENST00000376490 RTL1A6NKG5 1358 aa19.65■□□□□ 0.74
CLCN6-203ENST00000376490 CAMKK2Q96RR4 588 aa19.64■□□□□ 0.73
CLCN6-203ENST00000376490 EMILIN1Q9Y6C2 1016 aa19.64■□□□□ 0.73
CLCN6-203ENST00000376490 KIF7Q2M1P5 1343 aa19.64■□□□□ 0.73
CLCN6-203ENST00000376490 NBPF6Q5VWK0 638 aa19.63■□□□□ 0.73
CLCN6-203ENST00000376490 PTF1AQ7RTS3 328 aa19.63■□□□□ 0.73
CLCN6-203ENST00000376490 NBPF4Q96M43 638 aa19.63■□□□□ 0.73
CLCN6-203ENST00000376490 PPM1GO15355 546 aaPredicted RBP19.62■□□□□ 0.73
CLCN6-203ENST00000376490 TNNT2P45379 298 aaPredicted RBP19.62■□□□□ 0.73
CLCN6-203ENST00000376490 TNS2Q63HR2 1409 aa19.61■□□□□ 0.73
CLCN6-203ENST00000376490 INSRP06213 1382 aa19.61■□□□□ 0.73
CLCN6-203ENST00000376490 FLT4P35916 1363 aa19.6■□□□□ 0.73
CLCN6-203ENST00000376490 USHBP1Q8N6Y0 703 aa19.6■□□□□ 0.73
CLCN6-203ENST00000376490 KIF24Q5T7B8 1368 aa19.59■□□□□ 0.73
CLCN6-203ENST00000376490 BCL11BQ9C0K0 894 aaPredicted RBP19.59■□□□□ 0.73
CLCN6-203ENST00000376490 POLKQ9UBT6 870 aa19.59■□□□□ 0.73
CLCN6-203ENST00000376490 BCL9O00512 1426 aa19.59■□□□□ 0.73
CLCN6-203ENST00000376490 KNSTRNQ9Y448 316 aa19.58■□□□□ 0.72
CLCN6-203ENST00000376490 RREB1Q92766 1687 aa19.58■□□□□ 0.72
CLCN6-203ENST00000376490 DDX54Q8TDD1 881 aaKnown RBP19.57■□□□□ 0.72
CLCN6-203ENST00000376490 SMG6Q86US8 1419 aaKnown RBP19.57■□□□□ 0.72
CLCN6-203ENST00000376490 SHANK3Q9BYB0 1731 aa19.56■□□□□ 0.72
CLCN6-203ENST00000376490 WASHC2AQ641Q2 1341 aa19.56■□□□□ 0.72
CLCN6-203ENST00000376490 PSDA5PKW4 1024 aaPredicted RBP19.56■□□□□ 0.72
CLCN6-203ENST00000376490 KCNQ2O43526 872 aa19.56■□□□□ 0.72
CLCN6-203ENST00000376490 ACSBG1Q96GR2 724 aa19.56■□□□□ 0.72
CLCN6-203ENST00000376490 NUP188Q5SRE5 1749 aa19.56■□□□□ 0.72
CLCN6-203ENST00000376490 MORC1Q86VD1 984 aa19.55■□□□□ 0.72
CLCN6-203ENST00000376490 MEGF6O75095 1541 aa19.55■□□□□ 0.72
CLCN6-203ENST00000376490 PLSCR1O15162 318 aa19.54■□□□□ 0.72
CLCN6-203ENST00000376490 ZCRB1Q8TBF4 217 aaKnown RBP19.54■□□□□ 0.72
CLCN6-203ENST00000376490 NHSQ6T4R5 1651 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms