RNA–Protein interactions for RNA: ENST00000375472.7

SUSD3-202, Transcript of sushi domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SUSD3, Length 1,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-202ENST00000375472 COL18A1P39060 1754 aa31.57■■■□□ 2.64
SUSD3-202ENST00000375472 WASHC2AQ641Q2 1341 aa31.56■■■□□ 2.64
SUSD3-202ENST00000375472 COL5A2P05997 1499 aaPredicted RBP31.56■■■□□ 2.64
SUSD3-202ENST00000375472 SOCS7O14512 581 aa31.55■■■□□ 2.64
SUSD3-202ENST00000375472 RGS12O14924 1447 aa31.55■■■□□ 2.64
SUSD3-202ENST00000375472 ONECUT3O60422 494 aaPredicted RBP31.54■■■□□ 2.64
SUSD3-202ENST00000375472 AXIN2Q9Y2T1 843 aa31.53■■■□□ 2.64
SUSD3-202ENST00000375472 KNSTRNQ9Y448 316 aa31.53■■■□□ 2.64
SUSD3-202ENST00000375472 SPATA31A1Q5TZJ5 1347 aa31.52■■■□□ 2.64
SUSD3-202ENST00000375472 LTN1O94822 1766 aa31.52■■■□□ 2.64
SUSD3-202ENST00000375472 NSD2O96028 1365 aa31.52■■■□□ 2.64
SUSD3-202ENST00000375472 LARP1Q6PKG0 1096 aaKnown RBP31.51■■■□□ 2.63
SUSD3-202ENST00000375472 CRB1P82279 1406 aa31.49■■■□□ 2.63
SUSD3-202ENST00000375472 WDR17Q8IZU2 1322 aa31.49■■■□□ 2.63
SUSD3-202ENST00000375472 IP6K1Q92551 441 aa31.48■■■□□ 2.63
SUSD3-202ENST00000375472 THRAP3Q9Y2W1 955 aaKnown RBP31.48■■■□□ 2.63
SUSD3-202ENST00000375472 BLMP54132 1417 aaPredicted RBP31.48■■■□□ 2.63
SUSD3-202ENST00000375472 MAP3K19Q56UN5 1328 aa31.48■■■□□ 2.63
SUSD3-202ENST00000375472 AMPHP49418 695 aa31.46■■■□□ 2.63
SUSD3-202ENST00000375472 RTL1A6NKG5 1358 aa31.45■■■□□ 2.63
SUSD3-202ENST00000375472 FAM98CQ17RN3 349 aaKnown RBP31.45■■■□□ 2.63
SUSD3-202ENST00000375472 BARGINQ6ZT62 677 aa31.45■■■□□ 2.63
SUSD3-202ENST00000375472 TOM1L2Q6ZVM7 507 aa31.45■■■□□ 2.63
SUSD3-202ENST00000375472 SEPT12Q8IYM1 358 aa31.45■■■□□ 2.63
SUSD3-202ENST00000375472 TCP11L2Q8N4U5 519 aa31.45■■■□□ 2.63
SUSD3-202ENST00000375472 KIF24Q5T7B8 1368 aa31.44■■■□□ 2.62
SUSD3-202ENST00000375472 CSB-PGBD3P0DP91 1061 aa31.44■■■□□ 2.62
SUSD3-202ENST00000375472 ANKRD26Q9UPS8 1709 aa31.44■■■□□ 2.62
SUSD3-202ENST00000375472 RGPD5Q99666 1765 aa31.43■■■□□ 2.62
SUSD3-202ENST00000375472 USP35Q9P2H5 1018 aa31.42■■■□□ 2.62
SUSD3-202ENST00000375472 ERBB3P21860 1342 aa31.42■■■□□ 2.62
SUSD3-202ENST00000375472 PER1O15534 1290 aaPredicted RBP31.41■■■□□ 2.62
SUSD3-202ENST00000375472 FBLN1P23142 703 aa31.41■■■□□ 2.62
SUSD3-202ENST00000375472 HOXC9P31274 260 aa31.41■■■□□ 2.62
SUSD3-202ENST00000375472 RRS1Q15050 365 aaKnown RBP31.41■■■□□ 2.62
SUSD3-202ENST00000375472 A0A0G2JS52 829 aa31.4■■■□□ 2.62
SUSD3-202ENST00000375472 MYT1Q01538 1121 aa31.4■■■□□ 2.62
SUSD3-202ENST00000375472 CARD10Q9BWT7 1032 aa31.4■■■□□ 2.62
SUSD3-202ENST00000375472 AMER1Q5JTC6 1135 aaPredicted RBP31.39■■■□□ 2.62
SUSD3-202ENST00000375472 ANKRD24Q8TF21 1146 aa31.39■■■□□ 2.62
SUSD3-202ENST00000375472 THSD7AQ9UPZ6 1657 aa31.36■■■□□ 2.61
SUSD3-202ENST00000375472 FLT4P35916 1363 aa31.36■■■□□ 2.61
SUSD3-202ENST00000375472 MORC1Q86VD1 984 aa31.36■■■□□ 2.61
SUSD3-202ENST00000375472 CDCA7Q9BWT1 371 aaPredicted RBP31.35■■■□□ 2.61
SUSD3-202ENST00000375472 NPC1L1Q9UHC9 1359 aa31.34■■■□□ 2.61
SUSD3-202ENST00000375472 KRT27Q7Z3Y8 459 aa31.34■■■□□ 2.61
SUSD3-202ENST00000375472 INSRP06213 1382 aa31.32■■■□□ 2.6
SUSD3-202ENST00000375472 NLRP2Q9NX02 1062 aa31.32■■■□□ 2.6
SUSD3-202ENST00000375472 FAM208AQ9UK61 1670 aaKnown RBP31.31■■■□□ 2.6
SUSD3-202ENST00000375472 SMG6Q86US8 1419 aaKnown RBP31.31■■■□□ 2.6
SUSD3-202ENST00000375472 POLKQ9UBT6 870 aa31.3■■■□□ 2.6
SUSD3-202ENST00000375472 EMILIN1Q9Y6C2 1016 aa31.3■■■□□ 2.6
SUSD3-202ENST00000375472 BRWD3Q6RI45 1802 aa31.3■■■□□ 2.6
SUSD3-202ENST00000375472 MAP2P11137 1827 aaKnown RBP31.29■■■□□ 2.6
SUSD3-202ENST00000375472 TNNT2P45379 298 aaPredicted RBP31.29■■■□□ 2.6
SUSD3-202ENST00000375472 LTV1Q96GA3 475 aaPredicted RBP31.29■■■□□ 2.6
SUSD3-202ENST00000375472 PPM1GO15355 546 aaPredicted RBP31.27■■■□□ 2.6
SUSD3-202ENST00000375472 HSP90AB2PQ58FF8 381 aa31.27■■■□□ 2.6
SUSD3-202ENST00000375472 PEAK1Q9H792 1746 aa31.27■■■□□ 2.6
SUSD3-202ENST00000375472 PARP4Q9UKK3 1724 aaKnown RBP31.25■■■□□ 2.59
SUSD3-202ENST00000375472 PDE3BQ13370 1112 aa31.25■■■□□ 2.59
SUSD3-202ENST00000375472 CC2D1BQ5T0F9 858 aaKnown RBP31.24■■■□□ 2.59
SUSD3-202ENST00000375472 UPF1Q92900 1129 aaKnown RBP eCLIP31.24■■■□□ 2.59
SUSD3-202ENST00000375472 DDB1Q16531 1140 aa31.22■■■□□ 2.59
SUSD3-202ENST00000375472 DISP2A7MBM2 1401 aa31.22■■■□□ 2.59
SUSD3-202ENST00000375472 WNK3Q9BYP7 1800 aa31.21■■■□□ 2.59
SUSD3-202ENST00000375472 IL2RBP14784 551 aa31.2■■■□□ 2.59
SUSD3-202ENST00000375472 CCDC125Q86Z20 511 aa31.2■■■□□ 2.59
SUSD3-202ENST00000375472 EXOC5O00471 708 aa31.17■■■□□ 2.58
SUSD3-202ENST00000375472 NBPF6Q5VWK0 638 aa31.16■■■□□ 2.58
SUSD3-202ENST00000375472 FAM196AQ6ZSG2 479 aa31.16■■■□□ 2.58
SUSD3-202ENST00000375472 NBPF4Q96M43 638 aa31.16■■■□□ 2.58
SUSD3-202ENST00000375472 LRRC37A3O60309 1634 aa31.15■■■□□ 2.58
SUSD3-202ENST00000375472 RGPD2P0DJD1 1756 aa31.11■■■□□ 2.57
SUSD3-202ENST00000375472 TNS2Q63HR2 1409 aa31.11■■■□□ 2.57
SUSD3-202ENST00000375472 EIF4A2Q14240 407 aaKnown RBP31.1■■■□□ 2.57
SUSD3-202ENST00000375472 MTHFSP49914 203 aa31.09■■■□□ 2.57
SUSD3-202ENST00000375472 OVOS2A0A0G2JMS6 1433 aa31.08■■■□□ 2.57
SUSD3-202ENST00000375472 EP400Q96L91 3159 aa31.08■■■□□ 2.57
SUSD3-202ENST00000375472 DDX10Q13206 875 aaKnown RBP31.08■■■□□ 2.57
SUSD3-202ENST00000375472 CNGB1Q14028 1251 aaPredicted RBP31.08■■■□□ 2.57
SUSD3-202ENST00000375472 FAM182BQ5T319 152 aa31.08■■■□□ 2.57
SUSD3-202ENST00000375472 RAPGEF4Q8WZA2 1011 aa31.08■■■□□ 2.57
SUSD3-202ENST00000375472 SF3B2Q13435 895 aaKnown RBP31.07■■■□□ 2.56
SUSD3-202ENST00000375472 NCAPD2Q15021 1401 aa31.07■■■□□ 2.56
SUSD3-202ENST00000375472 USHBP1Q8N6Y0 703 aa31.06■■■□□ 2.56
SUSD3-202ENST00000375472 EYA1Q99502 592 aa31.06■■■□□ 2.56
SUSD3-202ENST00000375472 TATP17735 454 aaPredicted RBP31.05■■■□□ 2.56
SUSD3-202ENST00000375472 BCL9O00512 1426 aa31.05■■■□□ 2.56
SUSD3-202ENST00000375472 MARCH10Q8NA82 808 aaPredicted RBP31.04■■■□□ 2.56
SUSD3-202ENST00000375472 MEGF6O75095 1541 aa31.02■■■□□ 2.56
SUSD3-202ENST00000375472 ZNF316A6NFI3 1004 aaPredicted RBP31.01■■■□□ 2.55
SUSD3-202ENST00000375472 ZCRB1Q8TBF4 217 aaKnown RBP31.01■■■□□ 2.55
SUSD3-202ENST00000375472 IGSF1Q8N6C5 1336 aa31■■■□□ 2.55
SUSD3-202ENST00000375472 PLEKHG2Q9H7P9 1386 aa30.99■■■□□ 2.55
SUSD3-202ENST00000375472 RGPD1P0DJD0 1748 aa30.98■■■□□ 2.55
SUSD3-202ENST00000375472 IL13P35225 146 aa30.98■■■□□ 2.55
SUSD3-202ENST00000375472 PARD3Q8TEW0 1356 aa30.96■■■□□ 2.55
SUSD3-202ENST00000375472 DIAPH1O60610 1272 aaKnown RBP30.96■■■□□ 2.55
SUSD3-202ENST00000375472 TRIM37O94972 964 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms