RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 FYCO1Q9BQS8 1478 aa9.84□□□□□ -0.83
HSPG2-203ENST00000374695 PPP1R12BO60237 982 aaPredicted RBP9.84□□□□□ -0.83
HSPG2-203ENST00000374695 IKQ13123 557 aaPredicted RBP9.84□□□□□ -0.83
HSPG2-203ENST00000374695 POTEB2H3BUK9 544 aa9.84□□□□□ -0.83
HSPG2-203ENST00000374695 BRPF1P55201 1214 aaPredicted RBP9.84□□□□□ -0.83
HSPG2-203ENST00000374695 RBM28Q9NW13 759 aaKnown RBP9.84□□□□□ -0.83
HSPG2-203ENST00000374695 GRPEL1Q9HAV7 217 aa9.84□□□□□ -0.83
HSPG2-203ENST00000374695 UBXN4Q92575 508 aa9.84□□□□□ -0.83
HSPG2-203ENST00000374695 CEP131Q9UPN4 1083 aa9.84□□□□□ -0.83
HSPG2-203ENST00000374695 LRRFIP2Q9Y608 721 aaKnown RBP9.84□□□□□ -0.83
HSPG2-203ENST00000374695 GNAI3P08754 354 aa9.84□□□□□ -0.83
HSPG2-203ENST00000374695 ME1P48163 572 aa9.84□□□□□ -0.83
HSPG2-203ENST00000374695 GCC1Q96CN9 775 aa9.84□□□□□ -0.83
HSPG2-203ENST00000374695 CLGNO14967 610 aa9.84□□□□□ -0.83
HSPG2-203ENST00000374695 CCDC102AQ96A19 550 aa9.84□□□□□ -0.83
HSPG2-203ENST00000374695 AK9Q5TCS8 1911 aa9.84□□□□□ -0.83
HSPG2-203ENST00000374695 SMC1AQ14683 1233 aaKnown RBP9.84□□□□□ -0.83
HSPG2-203ENST00000374695 PLEKHH1Q9ULM0 1364 aa9.83□□□□□ -0.84
HSPG2-203ENST00000374695 WASF1Q92558 559 aa9.83□□□□□ -0.84
HSPG2-203ENST00000374695 FAM193AP78312 1265 aa9.83□□□□□ -0.84
HSPG2-203ENST00000374695 TMCO3Q6UWJ1 677 aa9.83□□□□□ -0.84
HSPG2-203ENST00000374695 LNPKQ9C0E8 428 aa9.83□□□□□ -0.84
HSPG2-203ENST00000374695 SEPT11Q9NVA2 429 aaKnown RBP9.83□□□□□ -0.84
HSPG2-203ENST00000374695 VPS36Q86VN1 386 aa9.83□□□□□ -0.84
HSPG2-203ENST00000374695 ARHGAP29Q52LW3 1261 aa9.83□□□□□ -0.84
HSPG2-203ENST00000374695 SPC24Q8NBT2 197 aa9.83□□□□□ -0.84
HSPG2-203ENST00000374695 ZSCAN25Q6NSZ9 544 aa9.82□□□□□ -0.84
HSPG2-203ENST00000374695 GIGYF2Q6Y7W6 1299 aaKnown RBP9.82□□□□□ -0.84
HSPG2-203ENST00000374695 NACAP1Q9BZK3 213 aa9.82□□□□□ -0.84
HSPG2-203ENST00000374695 TRAK1Q9UPV9 953 aa9.82□□□□□ -0.84
HSPG2-203ENST00000374695 ZSCAN30Q86W11 494 aa9.82□□□□□ -0.84
HSPG2-203ENST00000374695 CCDC57Q2TAC2 916 aa9.82□□□□□ -0.84
HSPG2-203ENST00000374695 KIF6Q6ZMV9 814 aa9.82□□□□□ -0.84
HSPG2-203ENST00000374695 ZSCAN12O43309 604 aa9.82□□□□□ -0.84
HSPG2-203ENST00000374695 KIF20AO95235 890 aa9.82□□□□□ -0.84
HSPG2-203ENST00000374695 FGFR1OPO95684 399 aaKnown RBP9.82□□□□□ -0.84
HSPG2-203ENST00000374695 KIF18AQ8NI77 898 aa9.82□□□□□ -0.84
HSPG2-203ENST00000374695 CCDC88BA6NC98 1476 aa9.82□□□□□ -0.84
HSPG2-203ENST00000374695 TAOK3Q9H2K8 898 aa9.82□□□□□ -0.84
HSPG2-203ENST00000374695 PRPF40AO75400 957 aaKnown RBP9.81□□□□□ -0.84
HSPG2-203ENST00000374695 TANGO6Q9C0B7 1094 aa9.81□□□□□ -0.84
HSPG2-203ENST00000374695 POLA1P09884 1462 aaPredicted RBP9.81□□□□□ -0.84
HSPG2-203ENST00000374695 CCDC83Q8IWF9 413 aa9.81□□□□□ -0.84
HSPG2-203ENST00000374695 DDX12PQ92771 950 aa9.81□□□□□ -0.84
HSPG2-203ENST00000374695 AEBP2Q6ZN18 517 aaPredicted RBP9.81□□□□□ -0.84
HSPG2-203ENST00000374695 CGNQ9P2M7 1197 aaKnown RBP9.81□□□□□ -0.84
HSPG2-203ENST00000374695 PLEKHH2Q8IVE3 1493 aa9.81□□□□□ -0.84
HSPG2-203ENST00000374695 ANAPC15P60006 121 aa9.81□□□□□ -0.84
HSPG2-203ENST00000374695 NEUROD6Q96NK8 337 aa9.81□□□□□ -0.84
HSPG2-203ENST00000374695 CYP46A1Q9Y6A2 500 aa9.81□□□□□ -0.84
HSPG2-203ENST00000374695 IRX3P78415 501 aaPredicted RBP9.81□□□□□ -0.84
HSPG2-203ENST00000374695 BBXQ8WY36 941 aaPredicted RBP9.81□□□□□ -0.84
HSPG2-203ENST00000374695 TIGD1Q96MW7 591 aa9.81□□□□□ -0.84
HSPG2-203ENST00000374695 NEK4P51957 841 aa9.8□□□□□ -0.84
HSPG2-203ENST00000374695 CCDC30Q5VVM6 783 aa9.8□□□□□ -0.84
HSPG2-203ENST00000374695 ELL2O00472 640 aaPredicted RBP9.8□□□□□ -0.84
HSPG2-203ENST00000374695 CCDC69A6NI79 296 aa9.8□□□□□ -0.84
HSPG2-203ENST00000374695 KIF5CO60282 957 aa9.8□□□□□ -0.84
HSPG2-203ENST00000374695 SPECC1LQ69YQ0 1117 aa9.8□□□□□ -0.84
HSPG2-203ENST00000374695 PRIMPOLQ96LW4 560 aa9.8□□□□□ -0.84
HSPG2-203ENST00000374695 KRT32Q14532 448 aa9.8□□□□□ -0.84
HSPG2-203ENST00000374695 FMNL2Q96PY5 1086 aa9.8□□□□□ -0.84
HSPG2-203ENST00000374695 FYB1O15117 783 aa9.8□□□□□ -0.84
HSPG2-203ENST00000374695 NEBLO76041 1014 aa9.8□□□□□ -0.84
HSPG2-203ENST00000374695 CCDC175P0C221 793 aa9.8□□□□□ -0.84
HSPG2-203ENST00000374695 GRIPAP1Q4V328 841 aa9.8□□□□□ -0.84
HSPG2-203ENST00000374695 UPF3BQ9BZI7 483 aaKnown RBP9.8□□□□□ -0.84
HSPG2-203ENST00000374695 SFPQP23246 707 aaKnown RBP eCLIP9.8□□□□□ -0.848e-6■■■■□ 25.1
HSPG2-203ENST00000374695 HS1BP3Q53T59 392 aa9.8□□□□□ -0.84
HSPG2-203ENST00000374695 HOOK3Q86VS8 718 aa9.8□□□□□ -0.84
HSPG2-203ENST00000374695 ERICH4A6NGS2 130 aa9.8□□□□□ -0.84
HSPG2-203ENST00000374695 K7ELQ4 463 aaPredicted RBP9.8□□□□□ -0.84
HSPG2-203ENST00000374695 TUBB4BP68371 445 aa9.8□□□□□ -0.84
HSPG2-203ENST00000374695 ZSCAN31Q96LW9 406 aaPredicted RBP9.8□□□□□ -0.84
HSPG2-203ENST00000374695 PSME1Q06323 249 aa9.8□□□□□ -0.84
HSPG2-203ENST00000374695 GAS2L2Q8NHY3 880 aa9.8□□□□□ -0.84
HSPG2-203ENST00000374695 NAA15Q9BXJ9 866 aaKnown RBP9.8□□□□□ -0.84
HSPG2-203ENST00000374695 SPA17Q15506 151 aa9.8□□□□□ -0.84
HSPG2-203ENST00000374695 CCDC158Q5M9N0 1113 aa9.79□□□□□ -0.84
HSPG2-203ENST00000374695 MYOM3Q5VTT5 1437 aa9.79□□□□□ -0.84
HSPG2-203ENST00000374695 MSH5O43196 834 aa9.79□□□□□ -0.84
HSPG2-203ENST00000374695 GNAI2P04899 355 aa9.79□□□□□ -0.84
HSPG2-203ENST00000374695 BCL11BQ9C0K0 894 aaPredicted RBP9.79□□□□□ -0.84
HSPG2-203ENST00000374695 SMARCA4P51532 1647 aa9.79□□□□□ -0.84
HSPG2-203ENST00000374695 C6orf163Q5TEZ5 329 aa9.79□□□□□ -0.84
HSPG2-203ENST00000374695 CCT4P50991 539 aaKnown RBP9.79□□□□□ -0.84
HSPG2-203ENST00000374695 EIF5P55010 431 aaKnown RBP9.79□□□□□ -0.84
HSPG2-203ENST00000374695 CTNNA3Q9UI47 895 aa9.79□□□□□ -0.84
HSPG2-203ENST00000374695 GOLGA6L9A6NEM1 432 aa9.79□□□□□ -0.84
HSPG2-203ENST00000374695 APAF1O14727 1248 aa9.79□□□□□ -0.84
HSPG2-203ENST00000374695 PTPN14Q15678 1187 aa9.79□□□□□ -0.84
HSPG2-203ENST00000374695 NUP62CLQ9H1M0 184 aa9.79□□□□□ -0.84
HSPG2-203ENST00000374695 PDE3AQ14432 1141 aa9.79□□□□□ -0.84
HSPG2-203ENST00000374695 SPATA32Q96LK8 384 aa9.79□□□□□ -0.84
HSPG2-203ENST00000374695 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.79□□□□□ -0.843e-7■■□□□ 12
HSPG2-203ENST00000374695 V9GYY5 206 aaPredicted RBP9.79□□□□□ -0.84
HSPG2-203ENST00000374695 MYH10P35580 1976 aa9.79□□□□□ -0.84
HSPG2-203ENST00000374695 NEMFO60524 1076 aa9.79□□□□□ -0.84
HSPG2-203ENST00000374695 TERF1P54274 439 aa9.79□□□□□ -0.84
HSPG2-203ENST00000374695 FILIP1Q7Z7B0 1213 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms