RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 ANXA1P04083 346 aa21.7■■□□□ 1.06
TRAF3IP1-201ENST00000373327 IFT57Q9NWB7 429 aa21.7■■□□□ 1.06
TRAF3IP1-201ENST00000373327 YEATS2Q9ULM3 1422 aa21.7■■□□□ 1.06
TRAF3IP1-201ENST00000373327 TRPM1Q7Z4N2 1603 aa21.69■■□□□ 1.06
TRAF3IP1-201ENST00000373327 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.68■■□□□ 1.06
TRAF3IP1-201ENST00000373327 VAMP4O75379 141 aa21.68■■□□□ 1.06
TRAF3IP1-201ENST00000373327 CFAP44Q96MT7 982 aa21.68■■□□□ 1.06
TRAF3IP1-201ENST00000373327 MEIS3Q99687 375 aa21.68■■□□□ 1.06
TRAF3IP1-201ENST00000373327 CCDC27Q2M243 656 aa21.68■■□□□ 1.06
TRAF3IP1-201ENST00000373327 NPC1L1Q9UHC9 1359 aa21.67■■□□□ 1.06
TRAF3IP1-201ENST00000373327 ALDH1L2Q3SY69 923 aa21.67■■□□□ 1.06
TRAF3IP1-201ENST00000373327 TBC1D9Q6ZT07 1266 aa21.67■■□□□ 1.06
TRAF3IP1-201ENST00000373327 NLRP2Q9NX02 1062 aa21.67■■□□□ 1.06
TRAF3IP1-201ENST00000373327 MSNP26038 577 aaKnown RBP21.66■■□□□ 1.06
TRAF3IP1-201ENST00000373327 TRMT2AQ8IZ69 625 aaKnown RBP21.66■■□□□ 1.06
TRAF3IP1-201ENST00000373327 RSPH6AQ9H0K4 717 aa21.66■■□□□ 1.06
TRAF3IP1-201ENST00000373327 YTHDC2Q9H6S0 1430 aaKnown RBP21.66■■□□□ 1.06
TRAF3IP1-201ENST00000373327 PPIP5K1Q6PFW1 1433 aa21.66■■□□□ 1.06
TRAF3IP1-201ENST00000373327 NSD2O96028 1365 aa21.66■■□□□ 1.06
TRAF3IP1-201ENST00000373327 EIF4A2Q14240 407 aaKnown RBP21.66■■□□□ 1.06
TRAF3IP1-201ENST00000373327 GAS2L2Q8NHY3 880 aa21.66■■□□□ 1.06
TRAF3IP1-201ENST00000373327 GNAI2P04899 355 aa21.65■■□□□ 1.06
TRAF3IP1-201ENST00000373327 ABCC11Q96J66 1382 aa21.65■■□□□ 1.06
TRAF3IP1-201ENST00000373327 ZBTB40Q9NUA8 1239 aa21.65■■□□□ 1.06
TRAF3IP1-201ENST00000373327 CCDC30Q5VVM6 783 aa21.65■■□□□ 1.06
TRAF3IP1-201ENST00000373327 NUTM1Q86Y26 1132 aa21.65■■□□□ 1.06
TRAF3IP1-201ENST00000373327 RNF214Q8ND24 703 aa21.65■■□□□ 1.06
TRAF3IP1-201ENST00000373327 MPNDQ8N594 471 aa21.64■■□□□ 1.06
TRAF3IP1-201ENST00000373327 GOLGA6L4A6NEF3 574 aa21.64■■□□□ 1.05
TRAF3IP1-201ENST00000373327 CAVIN1Q6NZI2 390 aaKnown RBP21.64■■□□□ 1.05
TRAF3IP1-201ENST00000373327 DDX54Q8TDD1 881 aaKnown RBP21.64■■□□□ 1.05
TRAF3IP1-201ENST00000373327 LARP6Q9BRS8 491 aaKnown RBP21.64■■□□□ 1.05
TRAF3IP1-201ENST00000373327 UPF3BQ9BZI7 483 aaKnown RBP21.63■■□□□ 1.05
TRAF3IP1-201ENST00000373327 MRPL50Q8N5N7 158 aaKnown RBP21.63■■□□□ 1.05
TRAF3IP1-201ENST00000373327 DIAPH3Q9NSV4 1193 aa21.63■■□□□ 1.05
TRAF3IP1-201ENST00000373327 ZC3H6P61129 1189 aaKnown RBP21.63■■□□□ 1.05
TRAF3IP1-201ENST00000373327 K7ELQ4 463 aaPredicted RBP21.62■■□□□ 1.05
TRAF3IP1-201ENST00000373327 PRPF40AO75400 957 aaKnown RBP21.62■■□□□ 1.05
TRAF3IP1-201ENST00000373327 OTUD7AQ8TE49 926 aaPredicted RBP21.62■■□□□ 1.05
TRAF3IP1-201ENST00000373327 SIL1Q9H173 461 aa21.62■■□□□ 1.05
TRAF3IP1-201ENST00000373327 TRPM2O94759 1503 aa21.62■■□□□ 1.05
TRAF3IP1-201ENST00000373327 ZNF530Q6P9A1 599 aaPredicted RBP21.62■■□□□ 1.05
TRAF3IP1-201ENST00000373327 CLTCL1P53675 1640 aa21.62■■□□□ 1.05
TRAF3IP1-201ENST00000373327 NUCB1Q02818 461 aa21.61■■□□□ 1.05
TRAF3IP1-201ENST00000373327 RIMS2Q9UQ26 1411 aa21.61■■□□□ 1.05
TRAF3IP1-201ENST00000373327 HDAC1Q13547 482 aaPredicted RBP21.6■■□□□ 1.05
TRAF3IP1-201ENST00000373327 SSFA2P28290 1259 aa21.6■■□□□ 1.05
TRAF3IP1-201ENST00000373327 ZFYVE16Q7Z3T8 1539 aa21.6■■□□□ 1.05
TRAF3IP1-201ENST00000373327 TTC21BQ7Z4L5 1316 aa21.6■■□□□ 1.05
TRAF3IP1-201ENST00000373327 KDM5AP29375 1690 aaKnown RBP21.59■■□□□ 1.05
TRAF3IP1-201ENST00000373327 IFIT2P09913 472 aaKnown RBP21.59■■□□□ 1.05
TRAF3IP1-201ENST00000373327 THEMISQ8N1K5 641 aaPredicted RBP21.59■■□□□ 1.05
TRAF3IP1-201ENST00000373327 POGZQ7Z3K3 1410 aa21.59■■□□□ 1.05
TRAF3IP1-201ENST00000373327 MPRIPQ6WCQ1 1025 aa21.59■■□□□ 1.05
TRAF3IP1-201ENST00000373327 SRGAP3O43295 1099 aa21.58■■□□□ 1.05
TRAF3IP1-201ENST00000373327 GNAI3P08754 354 aa21.58■■□□□ 1.05
TRAF3IP1-201ENST00000373327 FOSBP53539 338 aa21.58■■□□□ 1.05
TRAF3IP1-201ENST00000373327 IQGAP3Q86VI3 1631 aa21.58■■□□□ 1.04
TRAF3IP1-201ENST00000373327 MYL6BP14649 208 aa21.58■■□□□ 1.04
TRAF3IP1-201ENST00000373327 LRRCC1Q9C099 1032 aa21.58■■□□□ 1.04
TRAF3IP1-201ENST00000373327 LRRFIP2Q9Y608 721 aaKnown RBP21.57■■□□□ 1.04
TRAF3IP1-201ENST00000373327 G2E3Q7L622 706 aa21.57■■□□□ 1.04
TRAF3IP1-201ENST00000373327 TNPO1Q92973 898 aaKnown RBP21.56■■□□□ 1.04
TRAF3IP1-201ENST00000373327 GNAT3A8MTJ3 354 aa21.56■■□□□ 1.04
TRAF3IP1-201ENST00000373327 HSP90B1P14625 803 aaKnown RBP21.56■■□□□ 1.04
TRAF3IP1-201ENST00000373327 RIC3Q7Z5B4 369 aa21.56■■□□□ 1.04
TRAF3IP1-201ENST00000373327 IL16Q14005 1332 aa21.56■■□□□ 1.04
TRAF3IP1-201ENST00000373327 MTHFSDQ2M296 383 aaKnown RBP21.55■■□□□ 1.04
TRAF3IP1-201ENST00000373327 SMC5Q8IY18 1101 aa21.55■■□□□ 1.04
TRAF3IP1-201ENST00000373327 INSRP06213 1382 aa21.55■■□□□ 1.04
TRAF3IP1-201ENST00000373327 DTNBO60941 627 aa21.55■■□□□ 1.04
TRAF3IP1-201ENST00000373327 GPATCH3Q96I76 525 aa21.55■■□□□ 1.04
TRAF3IP1-201ENST00000373327 PANK2Q9BZ23 570 aa21.55■■□□□ 1.04
TRAF3IP1-201ENST00000373327 VPS37CA5D8V6 355 aaPredicted RBP21.55■■□□□ 1.04
TRAF3IP1-201ENST00000373327 IL13P35225 146 aa21.55■■□□□ 1.04
TRAF3IP1-201ENST00000373327 RPAP2Q8IXW5 612 aaPredicted RBP21.55■■□□□ 1.04
TRAF3IP1-201ENST00000373327 ZBTB7BO15156 539 aaPredicted RBP21.54■■□□□ 1.04
TRAF3IP1-201ENST00000373327 ERC2O15083 957 aa21.54■■□□□ 1.04
TRAF3IP1-201ENST00000373327 CCT4P50991 539 aaKnown RBP21.54■■□□□ 1.04
TRAF3IP1-201ENST00000373327 RABEP1Q15276 862 aa21.54■■□□□ 1.04
TRAF3IP1-201ENST00000373327 BMP2KLQ5H9B9 411 aa21.54■■□□□ 1.04
TRAF3IP1-201ENST00000373327 SRCIN1Q9C0H9 1055 aa21.53■■□□□ 1.04
TRAF3IP1-201ENST00000373327 FLIIQ13045 1269 aa21.53■■□□□ 1.04
TRAF3IP1-201ENST00000373327 GORABQ5T7V8 394 aa21.53■■□□□ 1.04
TRAF3IP1-201ENST00000373327 RAPGEF4Q8WZA2 1011 aa21.53■■□□□ 1.04
TRAF3IP1-201ENST00000373327 PLEKHF1Q96S99 279 aa21.53■■□□□ 1.04
TRAF3IP1-201ENST00000373327 CWC27Q6UX04 472 aaKnown RBP21.52■■□□□ 1.04
TRAF3IP1-201ENST00000373327 TTC5Q8N0Z6 440 aa21.52■■□□□ 1.03
TRAF3IP1-201ENST00000373327 JARID2Q92833 1246 aaPredicted RBP21.52■■□□□ 1.03
TRAF3IP1-201ENST00000373327 G3BP1Q13283 466 aaKnown RBP eCLIP21.51■■□□□ 1.03
TRAF3IP1-201ENST00000373327 TAF7Q15545 349 aaPredicted RBP21.51■■□□□ 1.03
TRAF3IP1-201ENST00000373327 SKOR2Q2VWA4 1001 aaPredicted RBP21.51■■□□□ 1.03
TRAF3IP1-201ENST00000373327 UNC13BO14795 1591 aa21.51■■□□□ 1.03
TRAF3IP1-201ENST00000373327 PROSER2Q86WR7 435 aaPredicted RBP21.51■■□□□ 1.03
TRAF3IP1-201ENST00000373327 E9PCH4 1651 aa21.51■■□□□ 1.03
TRAF3IP1-201ENST00000373327 SYNMO15061 1565 aa21.51■■□□□ 1.03
TRAF3IP1-201ENST00000373327 SDSP20132 328 aa21.51■■□□□ 1.03
TRAF3IP1-201ENST00000373327 NUCB2P80303 420 aa21.51■■□□□ 1.03
TRAF3IP1-201ENST00000373327 NEXNQ0ZGT2 675 aa21.5■■□□□ 1.03
TRAF3IP1-201ENST00000373327 UHRF1BP1LA0JNW5 1464 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms