RNA–Protein interactions for RNA: ENST00000372390.8

TSC22D3-205, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 1,812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-205ENST00000372390 ARHGEF25Q86VW2 580 aa27.76■■■□□ 2.03
TSC22D3-205ENST00000372390 ABCC6O95255 1503 aa27.74■■■□□ 2.03
TSC22D3-205ENST00000372390 RTL1A6NKG5 1358 aa27.74■■■□□ 2.03
TSC22D3-205ENST00000372390 INSRP06213 1382 aa27.73■■■□□ 2.03
TSC22D3-205ENST00000372390 KIF24Q5T7B8 1368 aa27.73■■■□□ 2.03
TSC22D3-205ENST00000372390 AMPHP49418 695 aa27.73■■■□□ 2.03
TSC22D3-205ENST00000372390 HSP90AB2PQ58FF8 381 aa27.73■■■□□ 2.03
TSC22D3-205ENST00000372390 MEX3CQ5U5Q3 659 aaKnown RBP27.73■■■□□ 2.03
TSC22D3-205ENST00000372390 COL14A1Q05707 1796 aaKnown RBP27.72■■■□□ 2.03
TSC22D3-205ENST00000372390 FLT4P35916 1363 aa27.71■■■□□ 2.03
TSC22D3-205ENST00000372390 HOXC9P31274 260 aa27.7■■■□□ 2.02
TSC22D3-205ENST00000372390 YTHDC1Q96MU7 727 aaKnown RBP27.7■■■□□ 2.02
TSC22D3-205ENST00000372390 DIAPH1O60610 1272 aaKnown RBP27.69■■■□□ 2.02
TSC22D3-205ENST00000372390 CHRNA2Q15822 529 aa27.69■■■□□ 2.02
TSC22D3-205ENST00000372390 RGPD5Q99666 1765 aa27.69■■■□□ 2.02
TSC22D3-205ENST00000372390 ADAMTS8Q9UP79 889 aa27.68■■■□□ 2.02
TSC22D3-205ENST00000372390 WDR43Q15061 677 aaKnown RBP eCLIP27.67■■■□□ 2.02
TSC22D3-205ENST00000372390 LMO7Q8WWI1 1683 aa27.67■■■□□ 2.02
TSC22D3-205ENST00000372390 BLMP54132 1417 aaPredicted RBP27.67■■■□□ 2.02
TSC22D3-205ENST00000372390 COL18A1P39060 1754 aa27.67■■■□□ 2.02
TSC22D3-205ENST00000372390 FAM83GA6ND36 823 aa27.67■■■□□ 2.02
TSC22D3-205ENST00000372390 C8orf37Q96NL8 207 aa27.67■■■□□ 2.02
TSC22D3-205ENST00000372390 PLCH1Q4KWH8 1693 aa27.66■■■□□ 2.02
TSC22D3-205ENST00000372390 IL13P35225 146 aa27.66■■■□□ 2.02
TSC22D3-205ENST00000372390 EIF4A2Q14240 407 aaKnown RBP27.66■■■□□ 2.02
TSC22D3-205ENST00000372390 IP6K1Q92551 441 aa27.66■■■□□ 2.02
TSC22D3-205ENST00000372390 U2SURPO15042 1029 aaKnown RBP27.64■■■□□ 2.01
TSC22D3-205ENST00000372390 AXIN2Q9Y2T1 843 aa27.64■■■□□ 2.01
TSC22D3-205ENST00000372390 NWD2Q9ULI1 1742 aa27.63■■■□□ 2.01
TSC22D3-205ENST00000372390 NGLY1Q96IV0 654 aa27.63■■■□□ 2.01
TSC22D3-205ENST00000372390 LTV1Q96GA3 475 aaPredicted RBP27.62■■■□□ 2.01
TSC22D3-205ENST00000372390 CAMTA1Q9Y6Y1 1673 aa27.61■■■□□ 2.01
TSC22D3-205ENST00000372390 SLIT2O94813 1529 aa27.61■■■□□ 2.01
TSC22D3-205ENST00000372390 SENP3-EIF4A1A0A087X0R7 540 aa27.61■■■□□ 2.01
TSC22D3-205ENST00000372390 U2AF1L5P0DN76 240 aaPredicted RBP27.6■■■□□ 2.01
TSC22D3-205ENST00000372390 U2AF1Q01081 240 aaKnown RBP eCLIP27.6■■■□□ 2.01
TSC22D3-205ENST00000372390 BTG4Q9NY30 223 aa27.6■■■□□ 2.01
TSC22D3-205ENST00000372390 NUDCQ9Y266 331 aa27.6■■■□□ 2.01
TSC22D3-205ENST00000372390 RGPD1P0DJD0 1748 aa27.6■■■□□ 2.01
TSC22D3-205ENST00000372390 COL5A2P05997 1499 aaPredicted RBP27.59■■■□□ 2.01
TSC22D3-205ENST00000372390 RGPD2P0DJD1 1756 aa27.59■■■□□ 2.01
TSC22D3-205ENST00000372390 CCDC146Q8IYE0 955 aa27.57■■■□□ 2
TSC22D3-205ENST00000372390 NRAPQ86VF7 1730 aa27.57■■■□□ 2
TSC22D3-205ENST00000372390 FNBP4Q8N3X1 1017 aaPredicted RBP27.57■■■□□ 2
TSC22D3-205ENST00000372390 ERBB3P21860 1342 aa27.56■■■□□ 2
TSC22D3-205ENST00000372390 AFF2P51816 1311 aa27.55■■■□□ 2
TSC22D3-205ENST00000372390 HMOX1P09601 288 aa27.55■■■□□ 2
TSC22D3-205ENST00000372390 EVA1CP58658 441 aa27.55■■■□□ 2
TSC22D3-205ENST00000372390 ANKRD24Q8TF21 1146 aa27.55■■■□□ 2
TSC22D3-205ENST00000372390 FAM208AQ9UK61 1670 aaKnown RBP27.55■■■□□ 2
TSC22D3-205ENST00000372390 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.54■■■□□ 2
TSC22D3-205ENST00000372390 CSB-PGBD3P0DP91 1061 aa27.53■■■□□ 2
TSC22D3-205ENST00000372390 STRN4Q9NRL3 753 aa27.53■■■□□ 2
TSC22D3-205ENST00000372390 AEBP1Q8IUX7 1158 aa27.53■■■□□ 2
TSC22D3-205ENST00000372390 EYA1Q99502 592 aa27.53■■■□□ 2
TSC22D3-205ENST00000372390 USP21Q9UK80 565 aa27.53■■■□□ 2
TSC22D3-205ENST00000372390 BCL9LQ86UU0 1499 aa27.52■■■□□ 2
TSC22D3-205ENST00000372390 HNRNPUQ00839 825 aaKnown RBP eCLIP27.52■■■□□ 2
TSC22D3-205ENST00000372390 UNC5CLQ8IV45 518 aa27.52■■■□□ 2
TSC22D3-205ENST00000372390 WDR17Q8IZU2 1322 aa27.52■■■□□ 2
TSC22D3-205ENST00000372390 RSPH6AQ9H0K4 717 aa27.5■■□□□ 1.99
TSC22D3-205ENST00000372390 USHBP1Q8N6Y0 703 aa27.49■■□□□ 1.99
TSC22D3-205ENST00000372390 IGSF1Q8N6C5 1336 aa27.49■■□□□ 1.99
TSC22D3-205ENST00000372390 NBPF6Q5VWK0 638 aa27.48■■□□□ 1.99
TSC22D3-205ENST00000372390 SULT6B1Q6IMI4 303 aa27.48■■□□□ 1.99
TSC22D3-205ENST00000372390 NBPF4Q96M43 638 aa27.48■■□□□ 1.99
TSC22D3-205ENST00000372390 CRB1P82279 1406 aa27.47■■□□□ 1.99
TSC22D3-205ENST00000372390 TOM1L2Q6ZVM7 507 aa27.47■■□□□ 1.99
TSC22D3-205ENST00000372390 LARP1Q6PKG0 1096 aaKnown RBP27.46■■□□□ 1.99
TSC22D3-205ENST00000372390 PLEKHF1Q96S99 279 aa27.46■■□□□ 1.99
TSC22D3-205ENST00000372390 PHF23Q9BUL5 403 aaPredicted RBP27.46■■□□□ 1.99
TSC22D3-205ENST00000372390 PRKAR2BP31323 418 aa27.46■■□□□ 1.99
TSC22D3-205ENST00000372390 ZNF772Q68DY9 489 aaPredicted RBP27.46■■□□□ 1.99
TSC22D3-205ENST00000372390 NLRP2Q9NX02 1062 aa27.46■■□□□ 1.99
TSC22D3-205ENST00000372390 FCHSD2O94868 740 aa27.45■■□□□ 1.98
TSC22D3-205ENST00000372390 RUNDC1Q96C34 613 aa27.44■■□□□ 1.98
TSC22D3-205ENST00000372390 VPS72Q15906 364 aa27.44■■□□□ 1.98
TSC22D3-205ENST00000372390 CCDC9Q9Y3X0 531 aaKnown RBP27.44■■□□□ 1.98
TSC22D3-205ENST00000372390 APAF1O14727 1248 aa27.43■■□□□ 1.98
TSC22D3-205ENST00000372390 TRPC5Q9UL62 973 aaPredicted RBP27.43■■□□□ 1.98
TSC22D3-205ENST00000372390 SALL2Q9Y467 1007 aaPredicted RBP27.43■■□□□ 1.98
TSC22D3-205ENST00000372390 KDRP35968 1356 aa27.42■■□□□ 1.98
TSC22D3-205ENST00000372390 ATRNO75882 1429 aa27.42■■□□□ 1.98
TSC22D3-205ENST00000372390 PHACTR3Q96KR7 559 aa27.41■■□□□ 1.98
TSC22D3-205ENST00000372390 CARD10Q9BWT7 1032 aa27.41■■□□□ 1.98
TSC22D3-205ENST00000372390 NCAPD2Q15021 1401 aa27.4■■□□□ 1.98
TSC22D3-205ENST00000372390 SPATA31A5Q5VU36 1347 aa27.39■■□□□ 1.98
TSC22D3-205ENST00000372390 SPATA31A7Q8IWB4 1347 aa27.39■■□□□ 1.98
TSC22D3-205ENST00000372390 TCP11L2Q8N4U5 519 aa27.39■■□□□ 1.98
TSC22D3-205ENST00000372390 RRP7AQ9Y3A4 280 aaKnown RBP27.39■■□□□ 1.97
TSC22D3-205ENST00000372390 SPATA31A1Q5TZJ5 1347 aa27.38■■□□□ 1.97
TSC22D3-205ENST00000372390 USP35Q9P2H5 1018 aa27.38■■□□□ 1.97
TSC22D3-205ENST00000372390 MAPK8IP3Q9UPT6 1336 aa27.37■■□□□ 1.97
TSC22D3-205ENST00000372390 QTRT2Q9H974 415 aaKnown RBP27.37■■□□□ 1.97
TSC22D3-205ENST00000372390 PNNQ9H307 717 aaKnown RBP27.35■■□□□ 1.97
TSC22D3-205ENST00000372390 THRAP3Q9Y2W1 955 aaKnown RBP27.35■■□□□ 1.97
TSC22D3-205ENST00000372390 NEUROD2Q15784 382 aa27.34■■□□□ 1.97
TSC22D3-205ENST00000372390 GJD4Q96KN9 370 aaPredicted RBP27.34■■□□□ 1.97
TSC22D3-205ENST00000372390 GLI3P10071 1580 aa27.32■■□□□ 1.96
TSC22D3-205ENST00000372390 ZBED9Q6R2W3 1325 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms