RNA–Protein interactions for RNA: ENST00000372017.3

SNCG-202, Transcript of synuclein gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCG, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-202ENST00000372017 COG3Q96JB2 828 aa17.4■□□□□ 0.38
SNCG-202ENST00000372017 COL5A2P05997 1499 aaPredicted RBP17.39■□□□□ 0.37
SNCG-202ENST00000372017 STRN4Q9NRL3 753 aa17.38■□□□□ 0.37
SNCG-202ENST00000372017 ANKRD26Q9UPS8 1709 aa17.38■□□□□ 0.37
SNCG-202ENST00000372017 LARP1Q6PKG0 1096 aaKnown RBP17.37■□□□□ 0.37
SNCG-202ENST00000372017 SPATA31A5Q5VU36 1347 aa17.37■□□□□ 0.37
SNCG-202ENST00000372017 SPATA31A7Q8IWB4 1347 aa17.37■□□□□ 0.37
SNCG-202ENST00000372017 PER1O15534 1290 aaPredicted RBP17.36■□□□□ 0.37
SNCG-202ENST00000372017 CCDC9Q9Y3X0 531 aaKnown RBP17.36■□□□□ 0.37
SNCG-202ENST00000372017 SRCAPQ6ZRS2 3230 aa17.36■□□□□ 0.37
SNCG-202ENST00000372017 BRWD3Q6RI45 1802 aa17.35■□□□□ 0.37
SNCG-202ENST00000372017 PEAK1Q9H792 1746 aa17.35■□□□□ 0.37
SNCG-202ENST00000372017 ZEB1P37275 1124 aaPredicted RBP17.34■□□□□ 0.37
SNCG-202ENST00000372017 CGNL1Q0VF96 1302 aa17.34■□□□□ 0.37
SNCG-202ENST00000372017 RRS1Q15050 365 aaKnown RBP17.34■□□□□ 0.37
SNCG-202ENST00000372017 MAP3K19Q56UN5 1328 aa17.34■□□□□ 0.37
SNCG-202ENST00000372017 SPATA31A1Q5TZJ5 1347 aa17.34■□□□□ 0.37
SNCG-202ENST00000372017 ABCC6O95255 1503 aa17.33■□□□□ 0.37
SNCG-202ENST00000372017 ONECUT3O60422 494 aaPredicted RBP17.33■□□□□ 0.36
SNCG-202ENST00000372017 EVA1CP58658 441 aa17.33■□□□□ 0.36
SNCG-202ENST00000372017 FAM98CQ17RN3 349 aaKnown RBP17.32■□□□□ 0.36
SNCG-202ENST00000372017 AMER1Q5JTC6 1135 aaPredicted RBP17.32■□□□□ 0.36
SNCG-202ENST00000372017 MAP2P11137 1827 aaKnown RBP17.32■□□□□ 0.36
SNCG-202ENST00000372017 IP6K1Q92551 441 aa17.31■□□□□ 0.36
SNCG-202ENST00000372017 USP35Q9P2H5 1018 aa17.31■□□□□ 0.36
SNCG-202ENST00000372017 THSD7AQ9UPZ6 1657 aa17.31■□□□□ 0.36
SNCG-202ENST00000372017 WDR17Q8IZU2 1322 aa17.3■□□□□ 0.36
SNCG-202ENST00000372017 HOXC9P31274 260 aa17.3■□□□□ 0.36
SNCG-202ENST00000372017 RGPD2P0DJD1 1756 aa17.3■□□□□ 0.36
SNCG-202ENST00000372017 EP400Q96L91 3159 aa17.3■□□□□ 0.36
SNCG-202ENST00000372017 CRB1P82279 1406 aa17.3■□□□□ 0.36
SNCG-202ENST00000372017 SEPT12Q8IYM1 358 aa17.29■□□□□ 0.36
SNCG-202ENST00000372017 KNSTRNQ9Y448 316 aa17.29■□□□□ 0.36
SNCG-202ENST00000372017 EMILIN1Q9Y6C2 1016 aa17.29■□□□□ 0.36
SNCG-202ENST00000372017 ERBB3P21860 1342 aa17.28■□□□□ 0.36
SNCG-202ENST00000372017 WNK3Q9BYP7 1800 aa17.28■□□□□ 0.36
SNCG-202ENST00000372017 TNNT2P45379 298 aaPredicted RBP17.27■□□□□ 0.36
SNCG-202ENST00000372017 TOM1L2Q6ZVM7 507 aa17.27■□□□□ 0.36
SNCG-202ENST00000372017 ANKRD24Q8TF21 1146 aa17.27■□□□□ 0.36
SNCG-202ENST00000372017 BLMP54132 1417 aaPredicted RBP17.27■□□□□ 0.35
SNCG-202ENST00000372017 NSD2O96028 1365 aa17.27■□□□□ 0.35
SNCG-202ENST00000372017 AMPHP49418 695 aa17.26■□□□□ 0.35
SNCG-202ENST00000372017 HSP90AB2PQ58FF8 381 aa17.26■□□□□ 0.35
SNCG-202ENST00000372017 POLKQ9UBT6 870 aa17.26■□□□□ 0.35
SNCG-202ENST00000372017 BARGINQ6ZT62 677 aa17.25■□□□□ 0.35
SNCG-202ENST00000372017 TCP11L2Q8N4U5 519 aa17.25■□□□□ 0.35
SNCG-202ENST00000372017 LTV1Q96GA3 475 aaPredicted RBP17.25■□□□□ 0.35
SNCG-202ENST00000372017 CSB-PGBD3P0DP91 1061 aa17.24■□□□□ 0.35
SNCG-202ENST00000372017 CC2D1BQ5T0F9 858 aaKnown RBP17.24■□□□□ 0.35
SNCG-202ENST00000372017 CARD10Q9BWT7 1032 aa17.24■□□□□ 0.35
SNCG-202ENST00000372017 RTL1A6NKG5 1358 aa17.24■□□□□ 0.35
SNCG-202ENST00000372017 PARP4Q9UKK3 1724 aaKnown RBP17.24■□□□□ 0.35
SNCG-202ENST00000372017 MORC1Q86VD1 984 aa17.23■□□□□ 0.35
SNCG-202ENST00000372017 THRAP3Q9Y2W1 955 aaKnown RBP17.23■□□□□ 0.35
SNCG-202ENST00000372017 FAM208AQ9UK61 1670 aaKnown RBP17.23■□□□□ 0.35
SNCG-202ENST00000372017 DISP2A7MBM2 1401 aa17.22■□□□□ 0.35
SNCG-202ENST00000372017 CNGB1Q14028 1251 aaPredicted RBP17.22■□□□□ 0.35
SNCG-202ENST00000372017 INSRP06213 1382 aa17.22■□□□□ 0.35
SNCG-202ENST00000372017 FLT4P35916 1363 aa17.22■□□□□ 0.35
SNCG-202ENST00000372017 LRRC37A3O60309 1634 aa17.21■□□□□ 0.35
SNCG-202ENST00000372017 KIF24Q5T7B8 1368 aa17.21■□□□□ 0.35
SNCG-202ENST00000372017 A0A0G2JS52 829 aa17.21■□□□□ 0.35
SNCG-202ENST00000372017 MYT1Q01538 1121 aa17.21■□□□□ 0.35
SNCG-202ENST00000372017 FAM182BQ5T319 152 aa17.21■□□□□ 0.35
SNCG-202ENST00000372017 NLRP2Q9NX02 1062 aa17.21■□□□□ 0.35
SNCG-202ENST00000372017 SMG6Q86US8 1419 aaKnown RBP17.21■□□□□ 0.34
SNCG-202ENST00000372017 NPC1L1Q9UHC9 1359 aa17.2■□□□□ 0.34
SNCG-202ENST00000372017 PPM1GO15355 546 aaPredicted RBP17.2■□□□□ 0.34
SNCG-202ENST00000372017 NBPF6Q5VWK0 638 aa17.19■□□□□ 0.34
SNCG-202ENST00000372017 KRT27Q7Z3Y8 459 aa17.19■□□□□ 0.34
SNCG-202ENST00000372017 NBPF4Q96M43 638 aa17.19■□□□□ 0.34
SNCG-202ENST00000372017 CCDC125Q86Z20 511 aa17.18■□□□□ 0.34
SNCG-202ENST00000372017 DDX10Q13206 875 aaKnown RBP17.17■□□□□ 0.34
SNCG-202ENST00000372017 USHBP1Q8N6Y0 703 aa17.17■□□□□ 0.34
SNCG-202ENST00000372017 EIF4A2Q14240 407 aaKnown RBP17.15■□□□□ 0.34
SNCG-202ENST00000372017 SHANK3Q9BYB0 1731 aa17.13■□□□□ 0.33
SNCG-202ENST00000372017 MEGF6O75095 1541 aa17.13■□□□□ 0.33
SNCG-202ENST00000372017 MTHFSP49914 203 aa17.13■□□□□ 0.33
SNCG-202ENST00000372017 DDB1Q16531 1140 aa17.13■□□□□ 0.33
SNCG-202ENST00000372017 NCAPD2Q15021 1401 aa17.13■□□□□ 0.33
SNCG-202ENST00000372017 IL2RBP14784 551 aa17.12■□□□□ 0.33
SNCG-202ENST00000372017 SF3B2Q13435 895 aaKnown RBP17.12■□□□□ 0.33
SNCG-202ENST00000372017 MARCH10Q8NA82 808 aaPredicted RBP17.12■□□□□ 0.33
SNCG-202ENST00000372017 EYA1Q99502 592 aa17.12■□□□□ 0.33
SNCG-202ENST00000372017 PDE3BQ13370 1112 aa17.11■□□□□ 0.33
SNCG-202ENST00000372017 CDCA7Q9BWT1 371 aaPredicted RBP17.11■□□□□ 0.33
SNCG-202ENST00000372017 TNS2Q63HR2 1409 aa17.11■□□□□ 0.33
SNCG-202ENST00000372017 RGPD1P0DJD0 1748 aa17.1■□□□□ 0.33
SNCG-202ENST00000372017 SBF2Q86WG5 1849 aa17.1■□□□□ 0.33
SNCG-202ENST00000372017 EXOC5O00471 708 aa17.09■□□□□ 0.33
SNCG-202ENST00000372017 COL3A1P02461 1466 aaPredicted RBP17.09■□□□□ 0.33
SNCG-202ENST00000372017 TNS1Q9HBL0 1735 aaKnown RBP17.08■□□□□ 0.32
SNCG-202ENST00000372017 ZNF316A6NFI3 1004 aaPredicted RBP17.08■□□□□ 0.32
SNCG-202ENST00000372017 PPP2R1AP30153 589 aa17.08■□□□□ 0.32
SNCG-202ENST00000372017 IL13P35225 146 aa17.08■□□□□ 0.32
SNCG-202ENST00000372017 DEFB132Q7Z7B7 95 aa17.08■□□□□ 0.32
SNCG-202ENST00000372017 OVOS2A0A0G2JMS6 1433 aa17.07■□□□□ 0.32
SNCG-202ENST00000372017 PARD3Q8TEW0 1356 aa17.07■□□□□ 0.32
SNCG-202ENST00000372017 IGSF1Q8N6C5 1336 aa17.06■□□□□ 0.32
SNCG-202ENST00000372017 FAM196AQ6ZSG2 479 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms