RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 PDLIM2Q96JY6 352 aa20.84■□□□□ 0.93
DKC1-201ENST00000369550 PPIP5K1Q6PFW1 1433 aa20.83■□□□□ 0.93
DKC1-201ENST00000369550 PRPF40AO75400 957 aaKnown RBP20.83■□□□□ 0.93
DKC1-201ENST00000369550 ALDH1L2Q3SY69 923 aa20.83■□□□□ 0.93
DKC1-201ENST00000369550 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.83■□□□□ 0.93
DKC1-201ENST00000369550 ZKSCAN5Q9Y2L8 839 aa20.83■□□□□ 0.93
DKC1-201ENST00000369550 ZC3H13Q5T200 1668 aaKnown RBP20.83■□□□□ 0.92
DKC1-201ENST00000369550 TMEM132EQ6IEE7 984 aa20.83■□□□□ 0.92
DKC1-201ENST00000369550 CHMP4BQ9H444 224 aaKnown RBP20.83■□□□□ 0.92
DKC1-201ENST00000369550 CFAP65Q6ZU64 1925 aaKnown RBP20.83■□□□□ 0.92
DKC1-201ENST00000369550 PKP1Q13835 747 aa20.82■□□□□ 0.92
DKC1-201ENST00000369550 PRDM4Q9UKN5 801 aa20.82■□□□□ 0.92
DKC1-201ENST00000369550 PPLO60437 1756 aa20.82■□□□□ 0.92
DKC1-201ENST00000369550 NSD2O96028 1365 aa20.82■□□□□ 0.92
DKC1-201ENST00000369550 ZBTB7BO15156 539 aaPredicted RBP20.81■□□□□ 0.92
DKC1-201ENST00000369550 MTERF4Q7Z6M4 381 aaKnown RBP20.81■□□□□ 0.92
DKC1-201ENST00000369550 RBM27Q9P2N5 1060 aaKnown RBP20.81■□□□□ 0.92
DKC1-201ENST00000369550 AK9Q5TCS8 1911 aa20.81■□□□□ 0.92
DKC1-201ENST00000369550 DIP2BQ9P265 1576 aa20.8■□□□□ 0.92
DKC1-201ENST00000369550 SETBP1Q9Y6X0 1596 aa20.8■□□□□ 0.92
DKC1-201ENST00000369550 SIGLEC1Q9BZZ2 1709 aa20.8■□□□□ 0.92
DKC1-201ENST00000369550 DYNC1I1O14576 645 aa20.8■□□□□ 0.92
DKC1-201ENST00000369550 YEATS2Q9ULM3 1422 aa20.8■□□□□ 0.92
DKC1-201ENST00000369550 USP32Q8NFA0 1604 aa20.79■□□□□ 0.92
DKC1-201ENST00000369550 ARHGAP31Q2M1Z3 1444 aa20.79■□□□□ 0.92
DKC1-201ENST00000369550 PIK3C2BO00750 1634 aa20.79■□□□□ 0.92
DKC1-201ENST00000369550 ANKRD36BQ8N2N9 1353 aa20.79■□□□□ 0.92
DKC1-201ENST00000369550 RPGRIP1LQ68CZ1 1315 aa20.78■□□□□ 0.92
DKC1-201ENST00000369550 MCM5P33992 734 aa20.78■□□□□ 0.92
DKC1-201ENST00000369550 CCDC39Q9UFE4 941 aa20.78■□□□□ 0.92
DKC1-201ENST00000369550 EVC2Q86UK5 1308 aa20.78■□□□□ 0.92
DKC1-201ENST00000369550 CYP2E1P05181 493 aaPredicted RBP20.78■□□□□ 0.92
DKC1-201ENST00000369550 GPT2Q8TD30 523 aa20.78■□□□□ 0.92
DKC1-201ENST00000369550 SYCE3A1L190 88 aa20.77■□□□□ 0.92
DKC1-201ENST00000369550 GGNBP2Q9H3C7 697 aa20.77■□□□□ 0.92
DKC1-201ENST00000369550 QRICH2Q9H0J4 1663 aa20.77■□□□□ 0.92
DKC1-201ENST00000369550 CWC22Q9HCG8 908 aaKnown RBP20.77■□□□□ 0.91
DKC1-201ENST00000369550 GSPT1P15170 499 aaKnown RBP20.76■□□□□ 0.91
DKC1-201ENST00000369550 FAM69CQ0P6D2 419 aa20.76■□□□□ 0.91
DKC1-201ENST00000369550 SASS6Q6UVJ0 657 aa20.76■□□□□ 0.91
DKC1-201ENST00000369550 LRSAM1Q6UWE0 723 aa20.75■□□□□ 0.91
DKC1-201ENST00000369550 SIRT2Q8IXJ6 389 aa20.75■□□□□ 0.91
DKC1-201ENST00000369550 CFAP44Q96MT7 982 aa20.75■□□□□ 0.91
DKC1-201ENST00000369550 C14orf93Q9H972 538 aaKnown RBP20.75■□□□□ 0.91
DKC1-201ENST00000369550 CABP2Q9NPB3 220 aa20.75■□□□□ 0.91
DKC1-201ENST00000369550 MED14O60244 1454 aa20.75■□□□□ 0.91
DKC1-201ENST00000369550 ST18O60284 1047 aa20.75■□□□□ 0.91
DKC1-201ENST00000369550 PTMAP06454 111 aaKnown RBP20.75■□□□□ 0.91
DKC1-201ENST00000369550 ZGPATQ8N5A5 531 aaKnown RBP20.74■□□□□ 0.91
DKC1-201ENST00000369550 RNF214Q8ND24 703 aa20.74■□□□□ 0.91
DKC1-201ENST00000369550 SMAP1Q8IYB5 467 aaPredicted RBP20.73■□□□□ 0.91
DKC1-201ENST00000369550 TMEM63CQ9P1W3 806 aa20.73■□□□□ 0.91
DKC1-201ENST00000369550 ZNF428Q96B54 188 aa20.73■□□□□ 0.91
DKC1-201ENST00000369550 USP26Q9BXU7 913 aa20.72■□□□□ 0.91
DKC1-201ENST00000369550 DIAPH1O60610 1272 aaKnown RBP20.72■□□□□ 0.91
DKC1-201ENST00000369550 INTS3Q68E01 1043 aaKnown RBP20.72■□□□□ 0.91
DKC1-201ENST00000369550 PLEKHM2Q8IWE5 1019 aa20.72■□□□□ 0.91
DKC1-201ENST00000369550 ZBTB7CA1YPR0 619 aa20.71■□□□□ 0.91
DKC1-201ENST00000369550 SAFB2Q14151 953 aaKnown RBP eCLIP20.71■□□□□ 0.91
DKC1-201ENST00000369550 FOXD4L5Q5VV16 416 aaPredicted RBP20.71■□□□□ 0.91
DKC1-201ENST00000369550 FOXD4L4Q8WXT5 416 aaPredicted RBP20.71■□□□□ 0.91
DKC1-201ENST00000369550 ELL2O00472 640 aaPredicted RBP20.71■□□□□ 0.91
DKC1-201ENST00000369550 DNTTIP2Q5QJE6 756 aaKnown RBP20.71■□□□□ 0.91
DKC1-201ENST00000369550 CHAMP1Q96JM3 812 aa20.71■□□□□ 0.91
DKC1-201ENST00000369550 ADGRB1O14514 1584 aa20.7■□□□□ 0.9
DKC1-201ENST00000369550 PRDM10Q9NQV6 1147 aa20.7■□□□□ 0.9
DKC1-201ENST00000369550 PODXL2Q9NZ53 605 aa20.7■□□□□ 0.9
DKC1-201ENST00000369550 BRPF1P55201 1214 aaPredicted RBP20.7■□□□□ 0.9
DKC1-201ENST00000369550 CASC1Q6TDU7 716 aa20.7■□□□□ 0.9
DKC1-201ENST00000369550 MRPL50Q8N5N7 158 aaKnown RBP20.7■□□□□ 0.9
DKC1-201ENST00000369550 ARHGAP45Q92619 1136 aa20.7■□□□□ 0.9
DKC1-201ENST00000369550 TTC22Q5TAA0 569 aa20.69■□□□□ 0.9
DKC1-201ENST00000369550 KIAA2012Q0VF49 1180 aa20.69■□□□□ 0.9
DKC1-201ENST00000369550 NEXMIFQ5QGS0 1516 aa20.69■□□□□ 0.9
DKC1-201ENST00000369550 NSFL1CQ9UNZ2 370 aaKnown RBP20.68■□□□□ 0.9
DKC1-201ENST00000369550 ZDHHC9Q9Y397 364 aa20.68■□□□□ 0.9
DKC1-201ENST00000369550 TSPOAP1O95153 1857 aa20.68■□□□□ 0.9
DKC1-201ENST00000369550 VAMP4O75379 141 aa20.67■□□□□ 0.9
DKC1-201ENST00000369550 PUS7Q96PZ0 661 aaKnown RBP20.67■□□□□ 0.9
DKC1-201ENST00000369550 A0A1W2PP64 1363 aa20.67■□□□□ 0.9
DKC1-201ENST00000369550 MBD3O95983 291 aa20.67■□□□□ 0.9
DKC1-201ENST00000369550 SRPK2P78362 688 aaKnown RBP20.67■□□□□ 0.9
DKC1-201ENST00000369550 SLC52A1Q9NWF4 448 aa20.67■□□□□ 0.9
DKC1-201ENST00000369550 REREQ9P2R6 1566 aa20.67■□□□□ 0.9
DKC1-201ENST00000369550 PREX1Q8TCU6 1659 aa20.67■□□□□ 0.9
DKC1-201ENST00000369550 TSPYL6Q8N831 410 aa20.66■□□□□ 0.9
DKC1-201ENST00000369550 COL3A1P02461 1466 aaPredicted RBP20.66■□□□□ 0.9
DKC1-201ENST00000369550 VGFO15240 615 aaPredicted RBP20.66■□□□□ 0.9
DKC1-201ENST00000369550 C16orf71Q8IYS4 520 aaPredicted RBP20.66■□□□□ 0.9
DKC1-201ENST00000369550 THUMPD2Q9BTF0 503 aaKnown RBP20.65■□□□□ 0.9
DKC1-201ENST00000369550 CCDC94Q9BW85 323 aaPredicted RBP20.65■□□□□ 0.9
DKC1-201ENST00000369550 PIK3R4Q99570 1358 aa20.65■□□□□ 0.9
DKC1-201ENST00000369550 ABCC4O15439 1325 aa20.65■□□□□ 0.9
DKC1-201ENST00000369550 PTCH1Q13635 1447 aa20.65■□□□□ 0.9
DKC1-201ENST00000369550 PRKAR2BP31323 418 aa20.65■□□□□ 0.9
DKC1-201ENST00000369550 NUTM2DQ5VT03 806 aaPredicted RBP20.64■□□□□ 0.9
DKC1-201ENST00000369550 IDI1Q13907 227 aa20.64■□□□□ 0.89
DKC1-201ENST00000369550 TSPY26PQ9H489 355 aa20.64■□□□□ 0.89
DKC1-201ENST00000369550 ZHX1Q9UKY1 873 aaPredicted RBP20.64■□□□□ 0.89
DKC1-201ENST00000369550 FCHSD2O94868 740 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms