RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 IL1RAPL2Q9NP60 686 aa24.23■■□□□ 1.47
CDC42BPB-201ENST00000361246 IFT57Q9NWB7 429 aa24.23■■□□□ 1.47
CDC42BPB-201ENST00000361246 NEK4P51957 841 aa24.23■■□□□ 1.47
CDC42BPB-201ENST00000361246 MCM10Q7L590 875 aa24.23■■□□□ 1.47
CDC42BPB-201ENST00000361246 SMC2O95347 1197 aa24.23■■□□□ 1.47
CDC42BPB-201ENST00000361246 IGHMBP2P38935 993 aaKnown RBP24.23■■□□□ 1.47
CDC42BPB-201ENST00000361246 CAGE1Q8TC20 777 aa24.23■■□□□ 1.47
CDC42BPB-201ENST00000361246 C9orf84Q5VXU9 1444 aa24.22■■□□□ 1.47
CDC42BPB-201ENST00000361246 THUMPD2Q9BTF0 503 aaKnown RBP24.22■■□□□ 1.47
CDC42BPB-201ENST00000361246 KAT6BQ8WYB5 2073 aa24.22■■□□□ 1.47
CDC42BPB-201ENST00000361246 SKOR2Q2VWA4 1001 aaPredicted RBP24.22■■□□□ 1.47
CDC42BPB-201ENST00000361246 NUDT16Q96DE0 195 aaKnown RBP24.21■■□□□ 1.47
CDC42BPB-201ENST00000361246 VSIG10Q8N0Z9 540 aa24.21■■□□□ 1.47
CDC42BPB-201ENST00000361246 POGZQ7Z3K3 1410 aa24.21■■□□□ 1.47
CDC42BPB-201ENST00000361246 TRMT1LQ7Z2T5 733 aaKnown RBP24.21■■□□□ 1.47
CDC42BPB-201ENST00000361246 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.21■■□□□ 1.47
CDC42BPB-201ENST00000361246 SYCP1Q15431 976 aa24.21■■□□□ 1.47
CDC42BPB-201ENST00000361246 ZNF692Q9BU19 519 aaPredicted RBP24.21■■□□□ 1.47
CDC42BPB-201ENST00000361246 TANGO6Q9C0B7 1094 aa24.2■■□□□ 1.46
CDC42BPB-201ENST00000361246 STARD3NLO95772 234 aa24.2■■□□□ 1.46
CDC42BPB-201ENST00000361246 PDCL3Q9H2J4 239 aa24.2■■□□□ 1.46
CDC42BPB-201ENST00000361246 MAGEC2Q9UBF1 373 aaPredicted RBP24.19■■□□□ 1.46
CDC42BPB-201ENST00000361246 SOGA3Q5TF21 947 aa24.19■■□□□ 1.46
CDC42BPB-201ENST00000361246 CWC27Q6UX04 472 aaKnown RBP24.19■■□□□ 1.46
CDC42BPB-201ENST00000361246 NACAP1Q9BZK3 213 aa24.19■■□□□ 1.46
CDC42BPB-201ENST00000361246 ERC1Q8IUD2 1116 aa24.18■■□□□ 1.46
CDC42BPB-201ENST00000361246 SRCIN1Q9C0H9 1055 aa24.18■■□□□ 1.46
CDC42BPB-201ENST00000361246 METTL24Q5JXM2 366 aa24.18■■□□□ 1.46
CDC42BPB-201ENST00000361246 MYD88Q99836 296 aa24.18■■□□□ 1.46
CDC42BPB-201ENST00000361246 SRGAP3O43295 1099 aa24.18■■□□□ 1.46
CDC42BPB-201ENST00000361246 GPTP24298 496 aa24.18■■□□□ 1.46
CDC42BPB-201ENST00000361246 PPM1FP49593 454 aaPredicted RBP24.18■■□□□ 1.46
CDC42BPB-201ENST00000361246 SEPT11Q9NVA2 429 aaKnown RBP24.18■■□□□ 1.46
CDC42BPB-201ENST00000361246 TXLNAP40222 546 aa24.17■■□□□ 1.46
CDC42BPB-201ENST00000361246 NUTM1Q86Y26 1132 aa24.17■■□□□ 1.46
CDC42BPB-201ENST00000361246 LRRCC1Q9C099 1032 aa24.17■■□□□ 1.46
CDC42BPB-201ENST00000361246 FBXO31Q5XUX0 539 aaPredicted RBP24.17■■□□□ 1.46
CDC42BPB-201ENST00000361246 MINDY4BA8MYZ0 360 aa24.16■■□□□ 1.46
CDC42BPB-201ENST00000361246 CRACR2BQ8N4Y2 399 aaPredicted RBP24.16■■□□□ 1.46
CDC42BPB-201ENST00000361246 PDZRN3Q9UPQ7 1066 aa24.16■■□□□ 1.46
CDC42BPB-201ENST00000361246 FIBPO43427 364 aa24.16■■□□□ 1.46
CDC42BPB-201ENST00000361246 RUFY1Q96T51 708 aa24.16■■□□□ 1.46
CDC42BPB-201ENST00000361246 ACSBG1Q96GR2 724 aa24.15■■□□□ 1.46
CDC42BPB-201ENST00000361246 GNAT3A8MTJ3 354 aa24.15■■□□□ 1.46
CDC42BPB-201ENST00000361246 POLR3DP05423 398 aaPredicted RBP24.15■■□□□ 1.46
CDC42BPB-201ENST00000361246 ZNF622Q969S3 477 aaKnown RBP eCLIP24.15■■□□□ 1.463e-6■■■□□ 16.9
CDC42BPB-201ENST00000361246 KIF21BO75037 1637 aa24.15■■□□□ 1.46
CDC42BPB-201ENST00000361246 RPGRQ92834 1020 aaKnown RBP24.15■■□□□ 1.46
CDC42BPB-201ENST00000361246 TMOD2Q9NZR1 351 aa24.15■■□□□ 1.46
CDC42BPB-201ENST00000361246 SCLT1Q96NL6 688 aa24.14■■□□□ 1.46
CDC42BPB-201ENST00000361246 SPDYE4A6NLX3 237 aa24.14■■□□□ 1.45
CDC42BPB-201ENST00000361246 STK38Q15208 465 aa24.14■■□□□ 1.45
CDC42BPB-201ENST00000361246 MPNDQ8N594 471 aa24.14■■□□□ 1.45
CDC42BPB-201ENST00000361246 CHMP5Q9NZZ3 219 aa24.13■■□□□ 1.45
CDC42BPB-201ENST00000361246 CHRNA2Q15822 529 aa24.12■■□□□ 1.45
CDC42BPB-201ENST00000361246 SPC24Q8NBT2 197 aa24.11■■□□□ 1.45
CDC42BPB-201ENST00000361246 CEP126Q9P2H0 1117 aa24.11■■□□□ 1.45
CDC42BPB-201ENST00000361246 JARID2Q92833 1246 aaPredicted RBP24.11■■□□□ 1.45
CDC42BPB-201ENST00000361246 UBAC1Q9BSL1 405 aa24.11■■□□□ 1.45
CDC42BPB-201ENST00000361246 GPS2Q13227 327 aa24.1■■□□□ 1.45
CDC42BPB-201ENST00000361246 HIP1O00291 1037 aa24.1■■□□□ 1.45
CDC42BPB-201ENST00000361246 PNISRQ8TF01 805 aaKnown RBP24.1■■□□□ 1.45
CDC42BPB-201ENST00000361246 NUCB2P80303 420 aa24.09■■□□□ 1.45
CDC42BPB-201ENST00000361246 ZNF652Q9Y2D9 606 aa24.09■■□□□ 1.45
CDC42BPB-201ENST00000361246 CCT4P50991 539 aaKnown RBP24.09■■□□□ 1.45
CDC42BPB-201ENST00000361246 PRPF40AO75400 957 aaKnown RBP24.09■■□□□ 1.45
CDC42BPB-201ENST00000361246 LIG1P18858 919 aa24.09■■□□□ 1.45
CDC42BPB-201ENST00000361246 CAVIN1Q6NZI2 390 aaKnown RBP24.09■■□□□ 1.45
CDC42BPB-201ENST00000361246 NAT10Q9H0A0 1025 aaKnown RBP24.09■■□□□ 1.45
CDC42BPB-201ENST00000361246 KINO60870 393 aaKnown RBP24.08■■□□□ 1.45
CDC42BPB-201ENST00000361246 GSE1Q14687 1217 aa24.08■■□□□ 1.45
CDC42BPB-201ENST00000361246 SETQ01105 290 aaPredicted RBP24.08■■□□□ 1.45
CDC42BPB-201ENST00000361246 TRIM22Q8IYM9 498 aa24.08■■□□□ 1.45
CDC42BPB-201ENST00000361246 DHX8Q14562 1220 aaKnown RBP24.08■■□□□ 1.45
CDC42BPB-201ENST00000361246 CDK13Q14004 1512 aaKnown RBP24.08■■□□□ 1.45
CDC42BPB-201ENST00000361246 C6orf229H3BNL8 230 aa24.08■■□□□ 1.44
CDC42BPB-201ENST00000361246 CASKIN1Q8WXD9 1431 aa24.08■■□□□ 1.44
CDC42BPB-201ENST00000361246 SMARCA5O60264 1052 aaPredicted RBP24.08■■□□□ 1.44
CDC42BPB-201ENST00000361246 CCDC82Q8N4S0 544 aa24.08■■□□□ 1.44
CDC42BPB-201ENST00000361246 AK7Q96M32 723 aa24.08■■□□□ 1.44
CDC42BPB-201ENST00000361246 AMOTL2Q9Y2J4 779 aa24.08■■□□□ 1.44
CDC42BPB-201ENST00000361246 NME9Q86XW9 330 aa24.07■■□□□ 1.44
CDC42BPB-201ENST00000361246 C8orf37Q96NL8 207 aa24.07■■□□□ 1.44
CDC42BPB-201ENST00000361246 MNS1Q8NEH6 495 aa24.07■■□□□ 1.44
CDC42BPB-201ENST00000361246 AIDAQ96BJ3 306 aa24.07■■□□□ 1.44
CDC42BPB-201ENST00000361246 ZNF771Q7L3S4 317 aaPredicted RBP24.07■■□□□ 1.44
CDC42BPB-201ENST00000361246 SLC52A1Q9NWF4 448 aa24.07■■□□□ 1.44
CDC42BPB-201ENST00000361246 DZIP1Q86YF9 867 aaKnown RBP24.07■■□□□ 1.44
CDC42BPB-201ENST00000361246 CYP46A1Q9Y6A2 500 aa24.06■■□□□ 1.44
CDC42BPB-201ENST00000361246 TRIM5Q9C035 493 aa24.06■■□□□ 1.44
CDC42BPB-201ENST00000361246 UBAP1LF5GYI3 381 aa24.06■■□□□ 1.44
CDC42BPB-201ENST00000361246 TRMT112Q9UI30 125 aaKnown RBP24.05■■□□□ 1.44
CDC42BPB-201ENST00000361246 ME1P48163 572 aa24.05■■□□□ 1.44
CDC42BPB-201ENST00000361246 MKNK2Q9HBH9 465 aa24.05■■□□□ 1.44
CDC42BPB-201ENST00000361246 CAVIN4Q5BKX8 364 aa24.05■■□□□ 1.44
CDC42BPB-201ENST00000361246 DHX37Q8IY37 1157 aaKnown RBP24.05■■□□□ 1.44
CDC42BPB-201ENST00000361246 DDX11Q96FC9 970 aa24.05■■□□□ 1.44
CDC42BPB-201ENST00000361246 ZSCAN25Q6NSZ9 544 aa24.04■■□□□ 1.44
CDC42BPB-201ENST00000361246 ZBTB3Q9H5J0 574 aa24.04■■□□□ 1.44
CDC42BPB-201ENST00000361246 ARHGEF11O15085 1522 aa24.04■■□□□ 1.44
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