RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 ZNF521Q96K83 1311 aa18.17■□□□□ 0.5
CSNK1E-201ENST00000359867 SHPRHQ149N8 1683 aa18.16■□□□□ 0.5
CSNK1E-201ENST00000359867 MAP3K19Q56UN5 1328 aa18.16■□□□□ 0.5
CSNK1E-201ENST00000359867 ZBTB7CA1YPR0 619 aa18.16■□□□□ 0.5
CSNK1E-201ENST00000359867 CDCA7LQ96GN5 454 aa18.16■□□□□ 0.5
CSNK1E-201ENST00000359867 PHLPP1O60346 1717 aa18.16■□□□□ 0.5
CSNK1E-201ENST00000359867 USP19O94966 1318 aa18.16■□□□□ 0.5
CSNK1E-201ENST00000359867 GCP02774 474 aa18.16■□□□□ 0.5
CSNK1E-201ENST00000359867 RCAN3Q9UKA8 241 aa18.16■□□□□ 0.5
CSNK1E-201ENST00000359867 ARHGEF10O15013 1369 aa18.16■□□□□ 0.5
CSNK1E-201ENST00000359867 NFAT5O94916 1531 aa18.15■□□□□ 0.5
CSNK1E-201ENST00000359867 PEAK1Q9H792 1746 aa18.15■□□□□ 0.5
CSNK1E-201ENST00000359867 SLIT3O75094 1523 aa18.14■□□□□ 0.5
CSNK1E-201ENST00000359867 COL16A1Q07092 1604 aaPredicted RBP18.13■□□□□ 0.49
CSNK1E-201ENST00000359867 PHRF1Q9P1Y6 1649 aaKnown RBP18.13■□□□□ 0.49
CSNK1E-201ENST00000359867 LTN1O94822 1766 aa18.13■□□□□ 0.49
CSNK1E-201ENST00000359867 ZC3H6P61129 1189 aaKnown RBP18.13■□□□□ 0.49
CSNK1E-201ENST00000359867 GOLGA2Q08379 1002 aa18.13■□□□□ 0.49
CSNK1E-201ENST00000359867 KCNH5Q8NCM2 988 aa18.13■□□□□ 0.49
CSNK1E-201ENST00000359867 CCDC146Q8IYE0 955 aa18.12■□□□□ 0.49
CSNK1E-201ENST00000359867 LRRC59Q96AG4 307 aaKnown RBP18.12■□□□□ 0.49
CSNK1E-201ENST00000359867 CRYBG1Q9Y4K1 1723 aa18.12■□□□□ 0.49
CSNK1E-201ENST00000359867 APAF1O14727 1248 aa18.12■□□□□ 0.49
CSNK1E-201ENST00000359867 COL3A1P02461 1466 aaPredicted RBP18.12■□□□□ 0.49
CSNK1E-201ENST00000359867 HSP90AB2PQ58FF8 381 aa18.11■□□□□ 0.49
CSNK1E-201ENST00000359867 CDK12Q9NYV4 1490 aaPredicted RBP18.11■□□□□ 0.49
CSNK1E-201ENST00000359867 AMPHP49418 695 aa18.11■□□□□ 0.49
CSNK1E-201ENST00000359867 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.11■□□□□ 0.49
CSNK1E-201ENST00000359867 RRP1P56182 461 aaKnown RBP18.1■□□□□ 0.49
CSNK1E-201ENST00000359867 RUNDC1Q96C34 613 aa18.1■□□□□ 0.49
CSNK1E-201ENST00000359867 PNPLA6Q8IY17 1366 aa18.1■□□□□ 0.49
CSNK1E-201ENST00000359867 NCBP3Q53F19 620 aaKnown RBP18.09■□□□□ 0.49
CSNK1E-201ENST00000359867 HAP1P54257 671 aaPredicted RBP18.08■□□□□ 0.49
CSNK1E-201ENST00000359867 DUSP27Q5VZP5 1158 aa18.08■□□□□ 0.49
CSNK1E-201ENST00000359867 ABCA3Q99758 1704 aa18.08■□□□□ 0.48
CSNK1E-201ENST00000359867 FLT4P35916 1363 aa18.08■□□□□ 0.48
CSNK1E-201ENST00000359867 DIAPH1O60610 1272 aaKnown RBP18.08■□□□□ 0.48
CSNK1E-201ENST00000359867 SLFN5Q08AF3 891 aa18.08■□□□□ 0.48
CSNK1E-201ENST00000359867 ARHGEF25Q86VW2 580 aa18.08■□□□□ 0.48
CSNK1E-201ENST00000359867 TRMT2AQ8IZ69 625 aaKnown RBP18.08■□□□□ 0.48
CSNK1E-201ENST00000359867 U2SURPO15042 1029 aaKnown RBP18.07■□□□□ 0.48
CSNK1E-201ENST00000359867 HOXC9P31274 260 aa18.07■□□□□ 0.48
CSNK1E-201ENST00000359867 CHRNA2Q15822 529 aa18.06■□□□□ 0.48
CSNK1E-201ENST00000359867 KIAA0232Q92628 1395 aa18.06■□□□□ 0.48
CSNK1E-201ENST00000359867 LTV1Q96GA3 475 aaPredicted RBP18.05■□□□□ 0.48
CSNK1E-201ENST00000359867 EIF4A2Q14240 407 aaKnown RBP18.05■□□□□ 0.48
CSNK1E-201ENST00000359867 E9PSI1 815 aa18.04■□□□□ 0.48
CSNK1E-201ENST00000359867 U2AF1L5P0DN76 240 aaPredicted RBP18.04■□□□□ 0.48
CSNK1E-201ENST00000359867 U2AF1Q01081 240 aaKnown RBP eCLIP18.04■□□□□ 0.48
CSNK1E-201ENST00000359867 IL13P35225 146 aa18.04■□□□□ 0.48
CSNK1E-201ENST00000359867 AXIN2Q9Y2T1 843 aa18.04■□□□□ 0.48
CSNK1E-201ENST00000359867 HSPA1LP34931 641 aa18.03■□□□□ 0.48
CSNK1E-201ENST00000359867 IP6K1Q92551 441 aa18.03■□□□□ 0.48
CSNK1E-201ENST00000359867 CCDC27Q2M243 656 aa18.02■□□□□ 0.48
CSNK1E-201ENST00000359867 RGPD5Q99666 1765 aa18.02■□□□□ 0.48
CSNK1E-201ENST00000359867 COL22A1Q8NFW1 1626 aaPredicted RBP18.02■□□□□ 0.48
CSNK1E-201ENST00000359867 RTL1A6NKG5 1358 aa18.02■□□□□ 0.48
CSNK1E-201ENST00000359867 WWC1Q8IX03 1113 aa18.02■□□□□ 0.48
CSNK1E-201ENST00000359867 TCP11L2Q8N4U5 519 aa18.02■□□□□ 0.48
CSNK1E-201ENST00000359867 PHF23Q9BUL5 403 aaPredicted RBP18.02■□□□□ 0.47
CSNK1E-201ENST00000359867 PRDM11Q9NQV5 511 aa18.02■□□□□ 0.47
CSNK1E-201ENST00000359867 KIF24Q5T7B8 1368 aa18.01■□□□□ 0.47
CSNK1E-201ENST00000359867 IL27Q8NEV9 243 aa18.01■□□□□ 0.47
CSNK1E-201ENST00000359867 RTN4Q9NQC3 1192 aaKnown RBP18.01■□□□□ 0.47
CSNK1E-201ENST00000359867 NUTM2BA6NNL0 878 aaPredicted RBP18.01■□□□□ 0.47
CSNK1E-201ENST00000359867 NUTM2EB1AL46 878 aaPredicted RBP18.01■□□□□ 0.47
CSNK1E-201ENST00000359867 HMOX1P09601 288 aa18.01■□□□□ 0.47
CSNK1E-201ENST00000359867 NUTM2AQ8IVF1 878 aaPredicted RBP18.01■□□□□ 0.47
CSNK1E-201ENST00000359867 NBR1Q14596 966 aa18■□□□□ 0.47
CSNK1E-201ENST00000359867 CPDO75976 1380 aa18■□□□□ 0.47
CSNK1E-201ENST00000359867 WDR63Q8IWG1 891 aa17.99■□□□□ 0.47
CSNK1E-201ENST00000359867 PNNQ9H307 717 aaKnown RBP17.99■□□□□ 0.47
CSNK1E-201ENST00000359867 COL18A1P39060 1754 aa17.99■□□□□ 0.47
CSNK1E-201ENST00000359867 ADAMTS2O95450 1211 aa17.99■□□□□ 0.47
CSNK1E-201ENST00000359867 AEBP1Q8IUX7 1158 aa17.98■□□□□ 0.47
CSNK1E-201ENST00000359867 NOP58Q9Y2X3 529 aaKnown RBP17.98■□□□□ 0.47
CSNK1E-201ENST00000359867 ANKRD24Q8TF21 1146 aa17.97■□□□□ 0.47
CSNK1E-201ENST00000359867 JCADQ9P266 1359 aa17.97■□□□□ 0.47
CSNK1E-201ENST00000359867 FAM83GA6ND36 823 aa17.97■□□□□ 0.47
CSNK1E-201ENST00000359867 USHBP1Q8N6Y0 703 aa17.97■□□□□ 0.47
CSNK1E-201ENST00000359867 EYA1Q99502 592 aa17.97■□□□□ 0.47
CSNK1E-201ENST00000359867 SPINK5Q9NQ38 1064 aaPredicted RBP17.97■□□□□ 0.47
CSNK1E-201ENST00000359867 RGPD2P0DJD1 1756 aa17.96■□□□□ 0.47
CSNK1E-201ENST00000359867 PLEKHF1Q96S99 279 aa17.96■□□□□ 0.47
CSNK1E-201ENST00000359867 RGPD1P0DJD0 1748 aa17.96■□□□□ 0.47
CSNK1E-201ENST00000359867 SULT6B1Q6IMI4 303 aa17.96■□□□□ 0.47
CSNK1E-201ENST00000359867 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.95■□□□□ 0.46
CSNK1E-201ENST00000359867 CAMTA1Q9Y6Y1 1673 aa17.95■□□□□ 0.46
CSNK1E-201ENST00000359867 ERBB3P21860 1342 aa17.95■□□□□ 0.46
CSNK1E-201ENST00000359867 RSPH6AQ9H0K4 717 aa17.94■□□□□ 0.46
CSNK1E-201ENST00000359867 LMO7Q8WWI1 1683 aa17.94■□□□□ 0.46
CSNK1E-201ENST00000359867 PRKAR2BP31323 418 aa17.94■□□□□ 0.46
CSNK1E-201ENST00000359867 NBPF6Q5VWK0 638 aa17.94■□□□□ 0.46
CSNK1E-201ENST00000359867 NBPF4Q96M43 638 aa17.94■□□□□ 0.46
CSNK1E-201ENST00000359867 EXOC6Q8TAG9 804 aa17.93■□□□□ 0.46
CSNK1E-201ENST00000359867 IGSF1Q8N6C5 1336 aa17.93■□□□□ 0.46
CSNK1E-201ENST00000359867 FCHSD2O94868 740 aa17.93■□□□□ 0.46
CSNK1E-201ENST00000359867 NEUROD2Q15784 382 aa17.93■□□□□ 0.46
CSNK1E-201ENST00000359867 RRP7AQ9Y3A4 280 aaKnown RBP17.93■□□□□ 0.46
CSNK1E-201ENST00000359867 MAPK8IP3Q9UPT6 1336 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 1107.3 ms