RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 HSPA5P11021 654 aaKnown RBP6.85□□□□□ -1.31
BRCA1-203ENST00000357654 TRIM22Q8IYM9 498 aa6.85□□□□□ -1.31
BRCA1-203ENST00000357654 PPM1EQ8WY54 764 aa6.85□□□□□ -1.31
BRCA1-203ENST00000357654 RPGRQ92834 1020 aaKnown RBP6.85□□□□□ -1.31
BRCA1-203ENST00000357654 INCENPQ9NQS7 918 aa6.85□□□□□ -1.31
BRCA1-203ENST00000357654 ARGLU1Q9NWB6 273 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-203ENST00000357654 ABCF2Q9UG63 623 aa6.85□□□□□ -1.31
BRCA1-203ENST00000357654 FERP16591 822 aa6.85□□□□□ -1.31
BRCA1-203ENST00000357654 NGLY1Q96IV0 654 aa6.85□□□□□ -1.31
BRCA1-203ENST00000357654 LRRFIP2Q9Y608 721 aaKnown RBP6.85□□□□□ -1.31
BRCA1-203ENST00000357654 SPTY2D1Q68D10 685 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-203ENST00000357654 LRP2BPQ9P2M1 347 aa6.85□□□□□ -1.31
BRCA1-203ENST00000357654 CKAP2LQ8IYA6 745 aa6.84□□□□□ -1.31
BRCA1-203ENST00000357654 TIGD1Q96MW7 591 aa6.84□□□□□ -1.31
BRCA1-203ENST00000357654 BMP2KQ9NSY1 1161 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-203ENST00000357654 FAM13BQ9NYF5 915 aa6.84□□□□□ -1.31
BRCA1-203ENST00000357654 UBTFL1P0CB47 393 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-203ENST00000357654 TATP17735 454 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-203ENST00000357654 JAKMIP3Q5VZ66 844 aa6.84□□□□□ -1.31
BRCA1-203ENST00000357654 BICD1Q96G01 975 aa6.84□□□□□ -1.31
BRCA1-203ENST00000357654 NAT10Q9H0A0 1025 aaKnown RBP6.84□□□□□ -1.31
BRCA1-203ENST00000357654 STIM1Q13586 685 aa6.84□□□□□ -1.32
BRCA1-203ENST00000357654 GTF3C6Q969F1 213 aa6.84□□□□□ -1.32
BRCA1-203ENST00000357654 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.84□□□□□ -1.32
BRCA1-203ENST00000357654 GSTTP1A0A1W2PQM5 241 aa6.83□□□□□ -1.32
BRCA1-203ENST00000357654 NDC80O14777 642 aa6.83□□□□□ -1.32
BRCA1-203ENST00000357654 EIF3JO75822 258 aaKnown RBP6.83□□□□□ -1.32
BRCA1-203ENST00000357654 USP8P40818 1118 aa6.83□□□□□ -1.32
BRCA1-203ENST00000357654 RIPK4P57078 832 aa6.83□□□□□ -1.32
BRCA1-203ENST00000357654 GSE1Q14687 1217 aa6.83□□□□□ -1.32
BRCA1-203ENST00000357654 DYDC1Q8WWB3 177 aa6.83□□□□□ -1.32
BRCA1-203ENST00000357654 SLU7O95391 586 aaKnown RBP6.83□□□□□ -1.32
BRCA1-203ENST00000357654 SERPINC1P01008 464 aa6.83□□□□□ -1.32
BRCA1-203ENST00000357654 TMCO4Q5TGY1 634 aa6.83□□□□□ -1.32
BRCA1-203ENST00000357654 CUL5Q93034 780 aa6.83□□□□□ -1.32
BRCA1-203ENST00000357654 CFAP45Q9UL16 551 aa6.83□□□□□ -1.32
BRCA1-203ENST00000357654 NUP155O75694 1391 aa6.83□□□□□ -1.32
BRCA1-203ENST00000357654 LARP1Q6PKG0 1096 aaKnown RBP6.83□□□□□ -1.32
BRCA1-203ENST00000357654 ERCC4Q92889 916 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-203ENST00000357654 NACAP1Q9BZK3 213 aa6.83□□□□□ -1.32
BRCA1-203ENST00000357654 SEC63Q9UGP8 760 aaKnown RBP6.83□□□□□ -1.32
BRCA1-203ENST00000357654 NUCB2P80303 420 aa6.83□□□□□ -1.32
BRCA1-203ENST00000357654 C6orf229H3BNL8 230 aa6.83□□□□□ -1.32
BRCA1-203ENST00000357654 ZBTB24O43167 697 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-203ENST00000357654 NUTM1Q86Y26 1132 aa6.83□□□□□ -1.32
BRCA1-203ENST00000357654 FAM212AQ96EL1 285 aa6.83□□□□□ -1.32
BRCA1-203ENST00000357654 GPRASP1Q5JY77 1395 aa6.83□□□□□ -1.32
BRCA1-203ENST00000357654 LPXNO60711 386 aa6.82□□□□□ -1.32
BRCA1-203ENST00000357654 MAP2K1Q02750 393 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-203ENST00000357654 TSNARE1Q96NA8 513 aa6.82□□□□□ -1.32
BRCA1-203ENST00000357654 DDX11L8A8MPP1 907 aa6.82□□□□□ -1.32
BRCA1-203ENST00000357654 CCDC57Q2TAC2 916 aa6.82□□□□□ -1.32
BRCA1-203ENST00000357654 CCDC178Q5BJE1 867 aa6.82□□□□□ -1.32
BRCA1-203ENST00000357654 TRIM5Q9C035 493 aa6.82□□□□□ -1.32
BRCA1-203ENST00000357654 CLGNO14967 610 aa6.82□□□□□ -1.32
BRCA1-203ENST00000357654 MYCP01106 439 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-203ENST00000357654 IGHMBP2P38935 993 aaKnown RBP6.82□□□□□ -1.32
BRCA1-203ENST00000357654 CCDC117Q8IWD4 279 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-203ENST00000357654 MKNK2Q9HBH9 465 aa6.82□□□□□ -1.32
BRCA1-203ENST00000357654 GOLGA6L7A0A1B0GV03 622 aa6.82□□□□□ -1.32
BRCA1-203ENST00000357654 BMS1Q14692 1282 aaKnown RBP6.82□□□□□ -1.32
BRCA1-203ENST00000357654 STK38Q15208 465 aa6.82□□□□□ -1.32
BRCA1-203ENST00000357654 NOD1Q9Y239 953 aa6.82□□□□□ -1.32
BRCA1-203ENST00000357654 GNL1P36915 607 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-203ENST00000357654 SPC24Q8NBT2 197 aa6.81□□□□□ -1.32
BRCA1-203ENST00000357654 MINDY4BA8MYZ0 360 aa6.81□□□□□ -1.32
BRCA1-203ENST00000357654 DIAPH1O60610 1272 aaKnown RBP6.81□□□□□ -1.32
BRCA1-203ENST00000357654 KMT5BQ4FZB7 885 aa6.81□□□□□ -1.32
BRCA1-203ENST00000357654 GIGYF2Q6Y7W6 1299 aaKnown RBP6.81□□□□□ -1.32
BRCA1-203ENST00000357654 HOOK3Q86VS8 718 aa6.81□□□□□ -1.32
BRCA1-203ENST00000357654 PPFIBP1Q86W92 1011 aa6.81□□□□□ -1.32
BRCA1-203ENST00000357654 SYNCQ9H7C4 482 aa6.81□□□□□ -1.32
BRCA1-203ENST00000357654 PPP1R12AO14974 1030 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-203ENST00000357654 PSMC4P43686 418 aa6.81□□□□□ -1.32
BRCA1-203ENST00000357654 HAUS7Q99871 368 aa6.81□□□□□ -1.32
BRCA1-203ENST00000357654 UBAC1Q9BSL1 405 aa6.81□□□□□ -1.32
BRCA1-203ENST00000357654 F8W031 263 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-203ENST00000357654 SPATA24Q86W54 205 aa6.81□□□□□ -1.32
BRCA1-203ENST00000357654 TICAM2Q86XR7 235 aa6.81□□□□□ -1.32
BRCA1-203ENST00000357654 CNTROBQ8N137 903 aa6.81□□□□□ -1.32
BRCA1-203ENST00000357654 NINLQ9Y2I6 1382 aa6.81□□□□□ -1.32
BRCA1-203ENST00000357654 CETN2P41208 172 aa6.81□□□□□ -1.32
BRCA1-203ENST00000357654 ACRBPQ8NEB7 543 aa6.81□□□□□ -1.32
BRCA1-203ENST00000357654 ZNF526Q8TF50 670 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-203ENST00000357654 UTP14AQ9BVJ6 771 aaKnown RBP6.81□□□□□ -1.32
BRCA1-203ENST00000357654 VAT1LQ9HCJ6 419 aa6.81□□□□□ -1.32
BRCA1-203ENST00000357654 COG6Q9Y2V7 657 aa6.81□□□□□ -1.32
BRCA1-203ENST00000357654 BAZ1AQ9NRL2 1556 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-203ENST00000357654 MYO1BO43795 1136 aa6.8□□□□□ -1.32
BRCA1-203ENST00000357654 KIAA0754O94854 1291 aa6.8□□□□□ -1.32
BRCA1-203ENST00000357654 REC8O95072 547 aa6.8□□□□□ -1.32
BRCA1-203ENST00000357654 TTC30AQ86WT1 665 aa6.8□□□□□ -1.32
BRCA1-203ENST00000357654 EVC2Q86UK5 1308 aa6.8□□□□□ -1.32
BRCA1-203ENST00000357654 PRPF31Q8WWY3 499 aaKnown RBP6.8□□□□□ -1.32
BRCA1-203ENST00000357654 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.8□□□□□ -1.32
BRCA1-203ENST00000357654 PRDM11Q9NQV5 511 aa6.8□□□□□ -1.32
BRCA1-203ENST00000357654 GJA3Q9Y6H8 435 aa6.8□□□□□ -1.32
BRCA1-203ENST00000357654 IDH1O75874 414 aaKnown RBP6.8□□□□□ -1.32
BRCA1-203ENST00000357654 NLRP5P59047 1200 aa6.8□□□□□ -1.32
BRCA1-203ENST00000357654 TAF4BQ92750 862 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms