RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 RUNDC1Q96C34 613 aa24.07■■□□□ 1.44
SMARCD3-202ENST00000356800 ABCA3Q99758 1704 aa24.06■■□□□ 1.44
SMARCD3-202ENST00000356800 SALL2Q9Y467 1007 aaPredicted RBP24.06■■□□□ 1.44
SMARCD3-202ENST00000356800 APAF1O14727 1248 aa24.05■■□□□ 1.44
SMARCD3-202ENST00000356800 TOM1O60784 492 aa24.05■■□□□ 1.44
SMARCD3-202ENST00000356800 IP6K1Q92551 441 aa24.05■■□□□ 1.44
SMARCD3-202ENST00000356800 PLEKHF1Q96S99 279 aa24.05■■□□□ 1.44
SMARCD3-202ENST00000356800 RGPD5Q99666 1765 aa24.04■■□□□ 1.44
SMARCD3-202ENST00000356800 RSPH6AQ9H0K4 717 aa24.03■■□□□ 1.44
SMARCD3-202ENST00000356800 PHLPP1O60346 1717 aa24.02■■□□□ 1.44
SMARCD3-202ENST00000356800 FCHSD2O94868 740 aa24.02■■□□□ 1.44
SMARCD3-202ENST00000356800 COL18A1P39060 1754 aa24.02■■□□□ 1.44
SMARCD3-202ENST00000356800 ZBTB7CA1YPR0 619 aa24.02■■□□□ 1.44
SMARCD3-202ENST00000356800 HMOX1P09601 288 aa24.02■■□□□ 1.44
SMARCD3-202ENST00000356800 ZC3H6P61129 1189 aaKnown RBP24.02■■□□□ 1.44
SMARCD3-202ENST00000356800 TCP11L2Q8N4U5 519 aa24.01■■□□□ 1.43
SMARCD3-202ENST00000356800 UBAP1LF5GYI3 381 aa24■■□□□ 1.43
SMARCD3-202ENST00000356800 PIP4K2BP78356 416 aa24■■□□□ 1.43
SMARCD3-202ENST00000356800 CERKQ8TCT0 537 aa24■■□□□ 1.43
SMARCD3-202ENST00000356800 COL16A1Q07092 1604 aaPredicted RBP24■■□□□ 1.43
SMARCD3-202ENST00000356800 RGPD2P0DJD1 1756 aa23.99■■□□□ 1.43
SMARCD3-202ENST00000356800 PRKAR2BP31323 418 aa23.99■■□□□ 1.43
SMARCD3-202ENST00000356800 AEBP1Q8IUX7 1158 aa23.99■■□□□ 1.43
SMARCD3-202ENST00000356800 ZNF521Q96K83 1311 aa23.97■■□□□ 1.43
SMARCD3-202ENST00000356800 CPDO75976 1380 aa23.97■■□□□ 1.43
SMARCD3-202ENST00000356800 LRRC59Q96AG4 307 aaKnown RBP23.97■■□□□ 1.43
SMARCD3-202ENST00000356800 LTV1Q96GA3 475 aaPredicted RBP23.97■■□□□ 1.43
SMARCD3-202ENST00000356800 EYA1Q99502 592 aa23.97■■□□□ 1.43
SMARCD3-202ENST00000356800 AXIN2Q9Y2T1 843 aa23.97■■□□□ 1.43
SMARCD3-202ENST00000356800 IGSF1Q8N6C5 1336 aa23.97■■□□□ 1.43
SMARCD3-202ENST00000356800 SULT6B1Q6IMI4 303 aa23.96■■□□□ 1.43
SMARCD3-202ENST00000356800 PNNQ9H307 717 aaKnown RBP23.96■■□□□ 1.43
SMARCD3-202ENST00000356800 RRP7AQ9Y3A4 280 aaKnown RBP23.96■■□□□ 1.43
SMARCD3-202ENST00000356800 COL22A1Q8NFW1 1626 aaPredicted RBP23.96■■□□□ 1.43
SMARCD3-202ENST00000356800 KIAA0232Q92628 1395 aa23.96■■□□□ 1.43
SMARCD3-202ENST00000356800 ABCC6O95255 1503 aa23.94■■□□□ 1.42
SMARCD3-202ENST00000356800 NGEFQ8N5V2 710 aa23.94■■□□□ 1.42
SMARCD3-202ENST00000356800 PHACTR3Q96KR7 559 aa23.94■■□□□ 1.42
SMARCD3-202ENST00000356800 MAPK8IP3Q9UPT6 1336 aa23.94■■□□□ 1.42
SMARCD3-202ENST00000356800 KDRP35968 1356 aa23.93■■□□□ 1.42
SMARCD3-202ENST00000356800 TMPOP42166 694 aaKnown RBP23.92■■□□□ 1.42
SMARCD3-202ENST00000356800 NEUROD2Q15784 382 aa23.92■■□□□ 1.42
SMARCD3-202ENST00000356800 CHRNA2Q15822 529 aa23.92■■□□□ 1.42
SMARCD3-202ENST00000356800 PHF23Q9BUL5 403 aaPredicted RBP23.92■■□□□ 1.42
SMARCD3-202ENST00000356800 CDCA7LQ96GN5 454 aa23.91■■□□□ 1.42
SMARCD3-202ENST00000356800 DLG5Q8TDM6 1919 aa23.91■■□□□ 1.42
SMARCD3-202ENST00000356800 CAMTA1Q9Y6Y1 1673 aa23.91■■□□□ 1.42
SMARCD3-202ENST00000356800 PDE3BQ13370 1112 aa23.9■■□□□ 1.42
SMARCD3-202ENST00000356800 NCBP3Q53F19 620 aaKnown RBP23.9■■□□□ 1.42
SMARCD3-202ENST00000356800 ANKRD24Q8TF21 1146 aa23.9■■□□□ 1.42
SMARCD3-202ENST00000356800 LMO7Q8WWI1 1683 aa23.9■■□□□ 1.42
SMARCD3-202ENST00000356800 WWC1Q8IX03 1113 aa23.89■■□□□ 1.42
SMARCD3-202ENST00000356800 NBPF6Q5VWK0 638 aa23.89■■□□□ 1.41
SMARCD3-202ENST00000356800 NBPF4Q96M43 638 aa23.89■■□□□ 1.41
SMARCD3-202ENST00000356800 HAP1P54257 671 aaPredicted RBP23.88■■□□□ 1.41
SMARCD3-202ENST00000356800 CCDC27Q2M243 656 aa23.88■■□□□ 1.41
SMARCD3-202ENST00000356800 NCAPD2Q15021 1401 aa23.87■■□□□ 1.41
SMARCD3-202ENST00000356800 ERBB3P21860 1342 aa23.87■■□□□ 1.41
SMARCD3-202ENST00000356800 USHBP1Q8N6Y0 703 aa23.87■■□□□ 1.41
SMARCD3-202ENST00000356800 NFE2L2Q16236 605 aa23.86■■□□□ 1.41
SMARCD3-202ENST00000356800 PRDM11Q9NQV5 511 aa23.86■■□□□ 1.41
SMARCD3-202ENST00000356800 NEFMP07197 916 aa23.86■■□□□ 1.41
SMARCD3-202ENST00000356800 TRIM35Q9UPQ4 493 aa23.86■■□□□ 1.41
SMARCD3-202ENST00000356800 GTF3C3Q9Y5Q9 886 aa23.86■■□□□ 1.41
SMARCD3-202ENST00000356800 FAM208AQ9UK61 1670 aaKnown RBP23.85■■□□□ 1.41
SMARCD3-202ENST00000356800 RIPK4P57078 832 aa23.84■■□□□ 1.41
SMARCD3-202ENST00000356800 GOLGA2Q08379 1002 aa23.84■■□□□ 1.41
SMARCD3-202ENST00000356800 SPINK5Q9NQ38 1064 aaPredicted RBP23.83■■□□□ 1.41
SMARCD3-202ENST00000356800 FAM83GA6ND36 823 aa23.81■■□□□ 1.4
SMARCD3-202ENST00000356800 SLFN5Q08AF3 891 aa23.81■■□□□ 1.4
SMARCD3-202ENST00000356800 WDR63Q8IWG1 891 aa23.8■■□□□ 1.4
SMARCD3-202ENST00000356800 TRMT2AQ8IZ69 625 aaKnown RBP23.79■■□□□ 1.4
SMARCD3-202ENST00000356800 COL5A2P05997 1499 aaPredicted RBP23.79■■□□□ 1.4
SMARCD3-202ENST00000356800 COL14A1Q05707 1796 aaKnown RBP23.79■■□□□ 1.4
SMARCD3-202ENST00000356800 MTHFSDQ2M296 383 aaKnown RBP23.78■■□□□ 1.4
SMARCD3-202ENST00000356800 DUSP27Q5VZP5 1158 aa23.78■■□□□ 1.4
SMARCD3-202ENST00000356800 E9PSI1 815 aa23.76■■□□□ 1.39
SMARCD3-202ENST00000356800 NLRP2Q9NX02 1062 aa23.76■■□□□ 1.39
SMARCD3-202ENST00000356800 CSB-PGBD3P0DP91 1061 aa23.75■■□□□ 1.39
SMARCD3-202ENST00000356800 WDR17Q8IZU2 1322 aa23.74■■□□□ 1.39
SMARCD3-202ENST00000356800 THUMPD2Q9BTF0 503 aaKnown RBP23.73■■□□□ 1.39
SMARCD3-202ENST00000356800 JCADQ9P266 1359 aa23.72■■□□□ 1.39
SMARCD3-202ENST00000356800 PLCH1Q4KWH8 1693 aa23.72■■□□□ 1.39
SMARCD3-202ENST00000356800 GAS2L2Q8NHY3 880 aa23.72■■□□□ 1.39
SMARCD3-202ENST00000356800 LMOD3Q0VAK6 560 aa23.71■■□□□ 1.39
SMARCD3-202ENST00000356800 IL16Q14005 1332 aa23.71■■□□□ 1.39
SMARCD3-202ENST00000356800 NUTM2BA6NNL0 878 aaPredicted RBP23.7■■□□□ 1.38
SMARCD3-202ENST00000356800 NUTM2EB1AL46 878 aaPredicted RBP23.7■■□□□ 1.38
SMARCD3-202ENST00000356800 ADAMTS2O95450 1211 aa23.7■■□□□ 1.38
SMARCD3-202ENST00000356800 DCTN1Q14203 1278 aa23.7■■□□□ 1.38
SMARCD3-202ENST00000356800 NUTM2AQ8IVF1 878 aaPredicted RBP23.7■■□□□ 1.38
SMARCD3-202ENST00000356800 BTG4Q9NY30 223 aa23.7■■□□□ 1.38
SMARCD3-202ENST00000356800 SUPT16HQ9Y5B9 1047 aaKnown RBP23.7■■□□□ 1.38
SMARCD3-202ENST00000356800 STRN4Q9NRL3 753 aa23.69■■□□□ 1.38
SMARCD3-202ENST00000356800 MEGF6O75095 1541 aa23.69■■□□□ 1.38
SMARCD3-202ENST00000356800 HSPA1LP34931 641 aa23.68■■□□□ 1.38
SMARCD3-202ENST00000356800 LARP1Q6PKG0 1096 aaKnown RBP23.68■■□□□ 1.38
SMARCD3-202ENST00000356800 NRAPQ86VF7 1730 aa23.67■■□□□ 1.38
SMARCD3-202ENST00000356800 TOM1L2Q6ZVM7 507 aa23.67■■□□□ 1.38
SMARCD3-202ENST00000356800 MCM10Q7L590 875 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms