RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 SHPRHQ149N8 1683 aa32.13■■■□□ 2.73
CHKA-202ENST00000356135 EIF4A2Q14240 407 aaKnown RBP32.13■■■□□ 2.73
CHKA-202ENST00000356135 AXIN2Q9Y2T1 843 aa32.13■■■□□ 2.73
CHKA-202ENST00000356135 ABCA3Q99758 1704 aa32.13■■■□□ 2.73
CHKA-202ENST00000356135 U2SURPO15042 1029 aaKnown RBP32.12■■■□□ 2.73
CHKA-202ENST00000356135 LTV1Q96GA3 475 aaPredicted RBP32.12■■■□□ 2.73
CHKA-202ENST00000356135 COL22A1Q8NFW1 1626 aaPredicted RBP32.11■■■□□ 2.73
CHKA-202ENST00000356135 KIF24Q5T7B8 1368 aa32.1■■■□□ 2.73
CHKA-202ENST00000356135 NUDCQ9Y266 331 aa32.09■■■□□ 2.73
CHKA-202ENST00000356135 RTL1A6NKG5 1358 aa32.09■■■□□ 2.73
CHKA-202ENST00000356135 U2AF1L5P0DN76 240 aaPredicted RBP32.09■■■□□ 2.73
CHKA-202ENST00000356135 U2AF1Q01081 240 aaKnown RBP eCLIP32.09■■■□□ 2.73
CHKA-202ENST00000356135 CPDO75976 1380 aa32.08■■■□□ 2.73
CHKA-202ENST00000356135 SENP3-EIF4A1A0A087X0R7 540 aa32.07■■■□□ 2.72
CHKA-202ENST00000356135 NUTM2BA6NNL0 878 aaPredicted RBP32.07■■■□□ 2.72
CHKA-202ENST00000356135 NUTM2EB1AL46 878 aaPredicted RBP32.07■■■□□ 2.72
CHKA-202ENST00000356135 NUTM2AQ8IVF1 878 aaPredicted RBP32.07■■■□□ 2.72
CHKA-202ENST00000356135 PRDM11Q9NQV5 511 aa32.07■■■□□ 2.72
CHKA-202ENST00000356135 JCADQ9P266 1359 aa32.05■■■□□ 2.72
CHKA-202ENST00000356135 FAM83GA6ND36 823 aa32.04■■■□□ 2.72
CHKA-202ENST00000356135 ADAMTS2O95450 1211 aa32.03■■■□□ 2.72
CHKA-202ENST00000356135 CCDC146Q8IYE0 955 aa32.03■■■□□ 2.72
CHKA-202ENST00000356135 COL18A1P39060 1754 aa32.02■■■□□ 2.72
CHKA-202ENST00000356135 HMOX1P09601 288 aa32.02■■■□□ 2.72
CHKA-202ENST00000356135 RGPD5Q99666 1765 aa32.01■■■□□ 2.71
CHKA-202ENST00000356135 ANKRD24Q8TF21 1146 aa32■■■□□ 2.71
CHKA-202ENST00000356135 EYA1Q99502 592 aa31.99■■■□□ 2.71
CHKA-202ENST00000356135 BLMP54132 1417 aaPredicted RBP31.99■■■□□ 2.71
CHKA-202ENST00000356135 AEBP1Q8IUX7 1158 aa31.96■■■□□ 2.71
CHKA-202ENST00000356135 CAMTA1Q9Y6Y1 1673 aa31.95■■■□□ 2.71
CHKA-202ENST00000356135 NBPF6Q5VWK0 638 aa31.95■■■□□ 2.71
CHKA-202ENST00000356135 SULT6B1Q6IMI4 303 aa31.95■■■□□ 2.71
CHKA-202ENST00000356135 NBPF4Q96M43 638 aa31.95■■■□□ 2.71
CHKA-202ENST00000356135 HNRNPUQ00839 825 aaKnown RBP eCLIP31.94■■■□□ 2.7
CHKA-202ENST00000356135 USHBP1Q8N6Y0 703 aa31.94■■■□□ 2.7
CHKA-202ENST00000356135 ERBB3P21860 1342 aa31.94■■■□□ 2.7
CHKA-202ENST00000356135 RSPH6AQ9H0K4 717 aa31.93■■■□□ 2.7
CHKA-202ENST00000356135 LMO7Q8WWI1 1683 aa31.92■■■□□ 2.7
CHKA-202ENST00000356135 RGPD1P0DJD0 1748 aa31.92■■■□□ 2.7
CHKA-202ENST00000356135 IGSF1Q8N6C5 1336 aa31.91■■■□□ 2.7
CHKA-202ENST00000356135 PLEKHF1Q96S99 279 aa31.91■■■□□ 2.7
CHKA-202ENST00000356135 BTG4Q9NY30 223 aa31.91■■■□□ 2.7
CHKA-202ENST00000356135 FCHSD2O94868 740 aa31.9■■■□□ 2.7
CHKA-202ENST00000356135 CSB-PGBD3P0DP91 1061 aa31.9■■■□□ 2.7
CHKA-202ENST00000356135 PRKAR2BP31323 418 aa31.9■■■□□ 2.7
CHKA-202ENST00000356135 SPATA31A6Q5VVP1 1343 aa31.9■■■□□ 2.7
CHKA-202ENST00000356135 ABCC6O95255 1503 aa31.9■■■□□ 2.7
CHKA-202ENST00000356135 STRN4Q9NRL3 753 aa31.89■■■□□ 2.7
CHKA-202ENST00000356135 RGPD2P0DJD1 1756 aa31.89■■■□□ 2.7
CHKA-202ENST00000356135 RUNDC1Q96C34 613 aa31.89■■■□□ 2.69
CHKA-202ENST00000356135 SALL2Q9Y467 1007 aaPredicted RBP31.89■■■□□ 2.69
CHKA-202ENST00000356135 FBXO41Q8TF61 875 aa31.87■■■□□ 2.69
CHKA-202ENST00000356135 LRP6O75581 1613 aa31.87■■■□□ 2.69
CHKA-202ENST00000356135 APAF1O14727 1248 aa31.86■■■□□ 2.69
CHKA-202ENST00000356135 NLRP2Q9NX02 1062 aa31.86■■■□□ 2.69
CHKA-202ENST00000356135 COL5A2P05997 1499 aaPredicted RBP31.86■■■□□ 2.69
CHKA-202ENST00000356135 EVA1CP58658 441 aa31.86■■■□□ 2.69
CHKA-202ENST00000356135 COL14A1Q05707 1796 aaKnown RBP31.86■■■□□ 2.69
CHKA-202ENST00000356135 PHACTR3Q96KR7 559 aa31.85■■■□□ 2.69
CHKA-202ENST00000356135 LARP1Q6PKG0 1096 aaKnown RBP31.83■■■□□ 2.69
CHKA-202ENST00000356135 C8orf37Q96NL8 207 aa31.83■■■□□ 2.69
CHKA-202ENST00000356135 WDR17Q8IZU2 1322 aa31.82■■■□□ 2.68
CHKA-202ENST00000356135 TCP11L2Q8N4U5 519 aa31.82■■■□□ 2.68
CHKA-202ENST00000356135 RRP7AQ9Y3A4 280 aaKnown RBP31.82■■■□□ 2.68
CHKA-202ENST00000356135 KDRP35968 1356 aa31.82■■■□□ 2.68
CHKA-202ENST00000356135 PNNQ9H307 717 aaKnown RBP31.81■■■□□ 2.68
CHKA-202ENST00000356135 TOM1L2Q6ZVM7 507 aa31.81■■■□□ 2.68
CHKA-202ENST00000356135 NEUROD2Q15784 382 aa31.79■■■□□ 2.68
CHKA-202ENST00000356135 MAPK8IP3Q9UPT6 1336 aa31.79■■■□□ 2.68
CHKA-202ENST00000356135 NGLY1Q96IV0 654 aa31.79■■■□□ 2.68
CHKA-202ENST00000356135 PLCH1Q4KWH8 1693 aa31.77■■■□□ 2.68
CHKA-202ENST00000356135 MEX3CQ5U5Q3 659 aaKnown RBP31.76■■■□□ 2.67
CHKA-202ENST00000356135 NCAPD2Q15021 1401 aa31.75■■■□□ 2.67
CHKA-202ENST00000356135 NEFMP07197 916 aa31.74■■■□□ 2.67
CHKA-202ENST00000356135 USP35Q9P2H5 1018 aa31.74■■■□□ 2.67
CHKA-202ENST00000356135 SLIT2O94813 1529 aa31.73■■■□□ 2.67
CHKA-202ENST00000356135 TMPOP42166 694 aaKnown RBP31.73■■■□□ 2.67
CHKA-202ENST00000356135 CARD10Q9BWT7 1032 aa31.71■■■□□ 2.67
CHKA-202ENST00000356135 FAM208AQ9UK61 1670 aaKnown RBP31.71■■■□□ 2.67
CHKA-202ENST00000356135 CRB1P82279 1406 aa31.7■■■□□ 2.66
CHKA-202ENST00000356135 MTHFSDQ2M296 383 aaKnown RBP31.69■■■□□ 2.66
CHKA-202ENST00000356135 FNBP4Q8N3X1 1017 aaPredicted RBP31.69■■■□□ 2.66
CHKA-202ENST00000356135 ZBED9Q6R2W3 1325 aa31.69■■■□□ 2.66
CHKA-202ENST00000356135 RIPK4P57078 832 aa31.68■■■□□ 2.66
CHKA-202ENST00000356135 NRAPQ86VF7 1730 aa31.68■■■□□ 2.66
CHKA-202ENST00000356135 NFE2L2Q16236 605 aa31.68■■■□□ 2.66
CHKA-202ENST00000356135 UNC5CLQ8IV45 518 aa31.67■■■□□ 2.66
CHKA-202ENST00000356135 BCL9LQ86UU0 1499 aa31.67■■■□□ 2.66
CHKA-202ENST00000356135 RAPGEF4Q8WZA2 1011 aa31.66■■■□□ 2.66
CHKA-202ENST00000356135 NWD2Q9ULI1 1742 aa31.65■■■□□ 2.66
CHKA-202ENST00000356135 MEGF6O75095 1541 aa31.64■■■□□ 2.66
CHKA-202ENST00000356135 USP21Q9UK80 565 aa31.64■■■□□ 2.66
CHKA-202ENST00000356135 TRIM35Q9UPQ4 493 aa31.63■■■□□ 2.65
CHKA-202ENST00000356135 TATP17735 454 aaPredicted RBP31.63■■■□□ 2.65
CHKA-202ENST00000356135 CCDC9Q9Y3X0 531 aaKnown RBP31.62■■■□□ 2.65
CHKA-202ENST00000356135 AFF2P51816 1311 aa31.62■■■□□ 2.65
CHKA-202ENST00000356135 WWC1Q8IX03 1113 aa31.61■■■□□ 2.65
CHKA-202ENST00000356135 PLEKHO1Q53GL0 409 aaPredicted RBP31.6■■■□□ 2.65
CHKA-202ENST00000356135 SPATA31A1Q5TZJ5 1347 aa31.59■■■□□ 2.65
CHKA-202ENST00000356135 ZNF521Q96K83 1311 aa31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms