RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 C1orf115Q9H7X2 142 aa15.02□□□□□ -0.01
SYNCRIP-201ENST00000355238 CENPHQ9H3R5 247 aa15.01□□□□□ -0.01
SYNCRIP-201ENST00000355238 NEMFO60524 1076 aa15.01□□□□□ -0.01
SYNCRIP-201ENST00000355238 NEUROD6Q96NK8 337 aa15.01□□□□□ -0.01
SYNCRIP-201ENST00000355238 TWISTNBQ3B726 338 aaPredicted RBP15.01□□□□□ -0.01
SYNCRIP-201ENST00000355238 MAP9Q49MG5 647 aa15.01□□□□□ -0.01
SYNCRIP-201ENST00000355238 MCM3P25205 808 aa15.01□□□□□ -0.01
SYNCRIP-201ENST00000355238 PDS5BQ9NTI5 1447 aa15.01□□□□□ -0.01
SYNCRIP-201ENST00000355238 SFPQP23246 707 aaKnown RBP eCLIP15□□□□□ -0.01
SYNCRIP-201ENST00000355238 FAM193AP78312 1265 aa15□□□□□ -0.01
SYNCRIP-201ENST00000355238 STIM1Q13586 685 aa15□□□□□ -0.01
SYNCRIP-201ENST00000355238 DDX11Q96FC9 970 aa15□□□□□ -0.01
SYNCRIP-201ENST00000355238 CCDC148Q8NFR7 591 aa15□□□□□ -0.01
SYNCRIP-201ENST00000355238 TIGD1Q96MW7 591 aa15□□□□□ -0.01
SYNCRIP-201ENST00000355238 PLEKHH1Q9ULM0 1364 aa14.99□□□□□ -0.01
SYNCRIP-201ENST00000355238 NUTM2FA1L443 756 aa14.99□□□□□ -0.01
SYNCRIP-201ENST00000355238 TNNT1P13805 278 aa14.99□□□□□ -0.01
SYNCRIP-201ENST00000355238 CCT4P50991 539 aaKnown RBP14.99□□□□□ -0.01
SYNCRIP-201ENST00000355238 DYDC1Q8WWB3 177 aa14.99□□□□□ -0.01
SYNCRIP-201ENST00000355238 NBPF1Q3BBV0 1214 aa14.98□□□□□ -0.01
SYNCRIP-201ENST00000355238 ARHGAP29Q52LW3 1261 aa14.98□□□□□ -0.01
SYNCRIP-201ENST00000355238 TBC1D2Q9BYX2 928 aa14.98□□□□□ -0.01
SYNCRIP-201ENST00000355238 RIC3Q7Z5B4 369 aa14.98□□□□□ -0.01
SYNCRIP-201ENST00000355238 TNPO1Q92973 898 aaKnown RBP14.98□□□□□ -0.01
SYNCRIP-201ENST00000355238 CCDC43Q96MW1 224 aaKnown RBP14.98□□□□□ -0.01
SYNCRIP-201ENST00000355238 EPB41L2O43491 1005 aaKnown RBP14.98□□□□□ -0.01
SYNCRIP-201ENST00000355238 PDRG1Q9NUG6 133 aa14.98□□□□□ -0.01
SYNCRIP-201ENST00000355238 ZNF428Q96B54 188 aa14.98□□□□□ -0.01
SYNCRIP-201ENST00000355238 ZFYVE27Q5T4F4 411 aa14.97□□□□□ -0.01
SYNCRIP-201ENST00000355238 MICALCLQ6ZW33 695 aa14.97□□□□□ -0.01
SYNCRIP-201ENST00000355238 VPS37DQ86XT2 251 aa14.97□□□□□ -0.01
SYNCRIP-201ENST00000355238 GGNBP2Q9H3C7 697 aa14.97□□□□□ -0.01
SYNCRIP-201ENST00000355238 UVSSAQ2YD98 709 aa14.97□□□□□ -0.01
SYNCRIP-201ENST00000355238 BLOC1S2Q6QNY1 142 aa14.97□□□□□ -0.01
SYNCRIP-201ENST00000355238 C11orf95C9JLR9 678 aaPredicted RBP14.97□□□□□ -0.01
SYNCRIP-201ENST00000355238 BMS1Q14692 1282 aaKnown RBP14.97□□□□□ -0.01
SYNCRIP-201ENST00000355238 PLEKHH2Q8IVE3 1493 aa14.97□□□□□ -0.01
SYNCRIP-201ENST00000355238 NEFHP12036 1026 aa14.96□□□□□ -0.01
SYNCRIP-201ENST00000355238 CCDC184Q52MB2 194 aa14.96□□□□□ -0.01
SYNCRIP-201ENST00000355238 ANKRD18AQ8IVF6 992 aa14.96□□□□□ -0.01
SYNCRIP-201ENST00000355238 POTEB2H3BUK9 544 aa14.96□□□□□ -0.01
SYNCRIP-201ENST00000355238 ATP2B1P20020 1258 aa14.96□□□□□ -0.01
SYNCRIP-201ENST00000355238 SLFN5Q08AF3 891 aa14.96□□□□□ -0.01
SYNCRIP-201ENST00000355238 LRRFIP2Q9Y608 721 aaKnown RBP14.96□□□□□ -0.01
SYNCRIP-201ENST00000355238 FYCO1Q9BQS8 1478 aa14.96□□□□□ -0.01
SYNCRIP-201ENST00000355238 ANO10Q9NW15 660 aa14.96□□□□□ -0.01
SYNCRIP-201ENST00000355238 CASQ1P31415 396 aa14.96□□□□□ -0.02
SYNCRIP-201ENST00000355238 SEPT7Q16181 437 aaKnown RBP14.96□□□□□ -0.02
SYNCRIP-201ENST00000355238 ENOX2Q16206 610 aaKnown RBP14.96□□□□□ -0.02
SYNCRIP-201ENST00000355238 JAKMIP3Q5VZ66 844 aa14.96□□□□□ -0.02
SYNCRIP-201ENST00000355238 ANKRD50Q9ULJ7 1429 aa14.96□□□□□ -0.02
SYNCRIP-201ENST00000355238 GTF2F1P35269 517 aaKnown RBP eCLIP14.95□□□□□ -0.022e-7■■■■■ 54.3
SYNCRIP-201ENST00000355238 STK3Q13188 491 aa14.95□□□□□ -0.02
SYNCRIP-201ENST00000355238 TSR2Q969E8 191 aaKnown RBP14.95□□□□□ -0.02
SYNCRIP-201ENST00000355238 TRIM34Q9BYJ4 488 aa14.95□□□□□ -0.02
SYNCRIP-201ENST00000355238 PAXBP1Q9Y5B6 917 aa14.95□□□□□ -0.02
SYNCRIP-201ENST00000355238 KRT32Q14532 448 aa14.95□□□□□ -0.02
SYNCRIP-201ENST00000355238 CFAP100Q494V2 611 aa14.95□□□□□ -0.02
SYNCRIP-201ENST00000355238 CCAR1Q8IX12 1150 aaKnown RBP14.95□□□□□ -0.02
SYNCRIP-201ENST00000355238 CLIP2Q9UDT6 1046 aa14.95□□□□□ -0.02
SYNCRIP-201ENST00000355238 URI1O94763 535 aaPredicted RBP14.95□□□□□ -0.02
SYNCRIP-201ENST00000355238 CDK5RAP3Q96JB5 506 aa14.95□□□□□ -0.02
SYNCRIP-201ENST00000355238 DNAJC2Q99543 621 aaKnown RBP14.95□□□□□ -0.02
SYNCRIP-201ENST00000355238 SCAND2PQ9GZW5 306 aaPredicted RBP14.95□□□□□ -0.02
SYNCRIP-201ENST00000355238 RBM33Q96EV2 1170 aaKnown RBP14.94□□□□□ -0.02
SYNCRIP-201ENST00000355238 TBC1D2BQ9UPU7 963 aa14.94□□□□□ -0.02
SYNCRIP-201ENST00000355238 RPAP2Q8IXW5 612 aaPredicted RBP14.94□□□□□ -0.02
SYNCRIP-201ENST00000355238 GTPBP4Q9BZE4 634 aaKnown RBP14.94□□□□□ -0.02
SYNCRIP-201ENST00000355238 USP25Q9UHP3 1055 aa14.94□□□□□ -0.02
SYNCRIP-201ENST00000355238 POLR3GO15318 223 aaPredicted RBP14.94□□□□□ -0.02
SYNCRIP-201ENST00000355238 SYCP1Q15431 976 aa14.94□□□□□ -0.02
SYNCRIP-201ENST00000355238 KLHL40Q2TBA0 621 aa14.94□□□□□ -0.02
SYNCRIP-201ENST00000355238 KIF5CO60282 957 aa14.94□□□□□ -0.02
SYNCRIP-201ENST00000355238 PRKAR2BP31323 418 aa14.94□□□□□ -0.02
SYNCRIP-201ENST00000355238 GSDMDP57764 484 aa14.93□□□□□ -0.02
SYNCRIP-201ENST00000355238 TRIM22Q8IYM9 498 aa14.93□□□□□ -0.02
SYNCRIP-201ENST00000355238 SSFA2P28290 1259 aa14.93□□□□□ -0.02
SYNCRIP-201ENST00000355238 TAX1BP1Q86VP1 789 aa14.93□□□□□ -0.02
SYNCRIP-201ENST00000355238 KRT222Q8N1A0 295 aa14.93□□□□□ -0.02
SYNCRIP-201ENST00000355238 JAKMIP1Q96N16 626 aaKnown RBP14.93□□□□□ -0.02
SYNCRIP-201ENST00000355238 RAD21O60216 631 aa14.93□□□□□ -0.02
SYNCRIP-201ENST00000355238 WDR97A6NE52 1622 aa14.93□□□□□ -0.02
SYNCRIP-201ENST00000355238 GAS2L2Q8NHY3 880 aa14.93□□□□□ -0.02
SYNCRIP-201ENST00000355238 CTAGE5O15320 804 aa14.92□□□□□ -0.02
SYNCRIP-201ENST00000355238 CDKL5O76039 1030 aa14.92□□□□□ -0.02
SYNCRIP-201ENST00000355238 KIAA1328Q86T90 577 aa14.92□□□□□ -0.02
SYNCRIP-201ENST00000355238 C16orf45Q96MC5 204 aaPredicted RBP14.92□□□□□ -0.02
SYNCRIP-201ENST00000355238 TRERF1Q96PN7 1200 aa14.91□□□□□ -0.02
SYNCRIP-201ENST00000355238 SPDYE4A6NLX3 237 aa14.91□□□□□ -0.02
SYNCRIP-201ENST00000355238 GPATCH11Q8N954 259 aa14.91□□□□□ -0.02
SYNCRIP-201ENST00000355238 CAMK4Q16566 473 aa14.91□□□□□ -0.02
SYNCRIP-201ENST00000355238 NCOA2Q15596 1464 aa14.91□□□□□ -0.02
SYNCRIP-201ENST00000355238 ADCY5O95622 1261 aa14.91□□□□□ -0.02
SYNCRIP-201ENST00000355238 IMMTQ16891 758 aaKnown RBP14.91□□□□□ -0.02
SYNCRIP-201ENST00000355238 SLC26A8Q96RN1 970 aa14.91□□□□□ -0.02
SYNCRIP-201ENST00000355238 TAF4BQ92750 862 aa14.9□□□□□ -0.02
SYNCRIP-201ENST00000355238 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.9□□□□□ -0.022e-6■■■■■ 154.6
SYNCRIP-201ENST00000355238 CTDP1Q9Y5B0 961 aaPredicted RBP14.9□□□□□ -0.02
SYNCRIP-201ENST00000355238 DHX29Q7Z478 1369 aaKnown RBP14.9□□□□□ -0.02
SYNCRIP-201ENST00000355238 EZRP15311 586 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms