RNA–Protein interactions for RNA: ENST00000349995.9

COG3-201, Transcript of component of oligomeric golgi complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COG3, Length 4,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-201ENST00000349995 NSD3Q9BZ95 1437 aa18.13■□□□□ 0.49
COG3-201ENST00000349995 TULP1O00294 542 aaPredicted RBP18.12■□□□□ 0.49
COG3-201ENST00000349995 NECTIN2Q92692 538 aa18.12■□□□□ 0.49
COG3-201ENST00000349995 TBC1D32Q96NH3 1257 aa18.12■□□□□ 0.49
COG3-201ENST00000349995 RPGRIP1LQ68CZ1 1315 aa18.12■□□□□ 0.49
COG3-201ENST00000349995 H3BQV1 296 aa18.12■□□□□ 0.49
COG3-201ENST00000349995 IFFO2Q5TF58 517 aa18.12■□□□□ 0.49
COG3-201ENST00000349995 FAM135AQ9P2D6 1515 aa18.11■□□□□ 0.49
COG3-201ENST00000349995 NOLC1Q14978 699 aaKnown RBP eCLIP18.11■□□□□ 0.49
COG3-201ENST00000349995 DHX37Q8IY37 1157 aaKnown RBP18.11■□□□□ 0.49
COG3-201ENST00000349995 TESK2Q96S53 571 aa18.11■□□□□ 0.49
COG3-201ENST00000349995 NOS1P29475 1434 aa18.1■□□□□ 0.49
COG3-201ENST00000349995 KLHL40Q2TBA0 621 aa18.1■□□□□ 0.49
COG3-201ENST00000349995 FILIP1Q7Z7B0 1213 aa18.1■□□□□ 0.49
COG3-201ENST00000349995 CEP170Q5SW79 1584 aa18.1■□□□□ 0.49
COG3-201ENST00000349995 DNMT1P26358 1616 aaKnown RBP18.1■□□□□ 0.49
COG3-201ENST00000349995 TTC12Q9H892 705 aaPredicted RBP18.1■□□□□ 0.49
COG3-201ENST00000349995 BAG4O95429 457 aaKnown RBP18.1■□□□□ 0.49
COG3-201ENST00000349995 CERS3Q8IU89 383 aa18.1■□□□□ 0.49
COG3-201ENST00000349995 ZNF526Q8TF50 670 aaPredicted RBP18.1■□□□□ 0.49
COG3-201ENST00000349995 ASXL2Q76L83 1435 aa18.09■□□□□ 0.49
COG3-201ENST00000349995 PRAG1Q86YV5 1406 aa18.09■□□□□ 0.49
COG3-201ENST00000349995 FAM177A1Q8N128 213 aaPredicted RBP18.09■□□□□ 0.49
COG3-201ENST00000349995 NOL10Q9BSC4 688 aaKnown RBP18.09■□□□□ 0.49
COG3-201ENST00000349995 SEC24BO95487 1268 aa18.09■□□□□ 0.49
COG3-201ENST00000349995 CWC22Q9HCG8 908 aaKnown RBP18.09■□□□□ 0.49
COG3-201ENST00000349995 RALGAPBQ86X10 1494 aa18.09■□□□□ 0.49
COG3-201ENST00000349995 KRT222Q8N1A0 295 aa18.09■□□□□ 0.49
COG3-201ENST00000349995 FAM184AQ8NB25 1140 aa18.09■□□□□ 0.49
COG3-201ENST00000349995 ZSCAN23Q3MJ62 389 aa18.08■□□□□ 0.49
COG3-201ENST00000349995 FMNL2Q96PY5 1086 aa18.08■□□□□ 0.49
COG3-201ENST00000349995 ACBD3Q9H3P7 528 aa18.08■□□□□ 0.48
COG3-201ENST00000349995 WWC1Q8IX03 1113 aa18.08■□□□□ 0.48
COG3-201ENST00000349995 IGHDP01880 384 aa18.07■□□□□ 0.48
COG3-201ENST00000349995 CCDC192P0DO97 292 aa18.07■□□□□ 0.48
COG3-201ENST00000349995 U2AF2P26368 475 aaKnown RBP eCLIP18.07■□□□□ 0.481e-6■■□□□ 14.1
COG3-201ENST00000349995 TMCO3Q6UWJ1 677 aa18.07■□□□□ 0.48
COG3-201ENST00000349995 UBXN4Q92575 508 aa18.07■□□□□ 0.48
COG3-201ENST00000349995 SLFN5Q08AF3 891 aa18.07■□□□□ 0.48
COG3-201ENST00000349995 NLRP6P59044 892 aa18.06■□□□□ 0.48
COG3-201ENST00000349995 KDM5BQ9UGL1 1544 aa18.06■□□□□ 0.48
COG3-201ENST00000349995 ADCY5O95622 1261 aa18.06■□□□□ 0.48
COG3-201ENST00000349995 SCAF11Q99590 1463 aaKnown RBP18.05■□□□□ 0.48
COG3-201ENST00000349995 PRIM1P49642 420 aaKnown RBP18.05■□□□□ 0.48
COG3-201ENST00000349995 RRS1Q15050 365 aaKnown RBP18.05■□□□□ 0.48
COG3-201ENST00000349995 ZNF330Q9Y3S2 320 aaPredicted RBP18.05■□□□□ 0.48
COG3-201ENST00000349995 KDM6BO15054 1643 aa18.05■□□□□ 0.48
COG3-201ENST00000349995 TTLL5Q6EMB2 1281 aa18.05■□□□□ 0.48
COG3-201ENST00000349995 TMX1Q9H3N1 280 aa18.05■□□□□ 0.48
COG3-201ENST00000349995 C1orf115Q9H7X2 142 aa18.05■□□□□ 0.48
COG3-201ENST00000349995 C14orf93Q9H972 538 aaKnown RBP18.05■□□□□ 0.48
COG3-201ENST00000349995 AXDND1Q5T1B0 1012 aaPredicted RBP18.04■□□□□ 0.48
COG3-201ENST00000349995 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.04■□□□□ 0.48
COG3-201ENST00000349995 V9GYY5 206 aaPredicted RBP18.04■□□□□ 0.48
COG3-201ENST00000349995 GDPD2Q9HCC8 539 aa18.04■□□□□ 0.48
COG3-201ENST00000349995 PTPN14Q15678 1187 aa18.04■□□□□ 0.48
COG3-201ENST00000349995 TEX14Q8IWB6 1497 aa18.04■□□□□ 0.48
COG3-201ENST00000349995 GNAI1P63096 354 aa18.04■□□□□ 0.48
COG3-201ENST00000349995 C10orf67Q8IYJ2 551 aa18.04■□□□□ 0.48
COG3-201ENST00000349995 DUOX2Q9NRD8 1548 aa18.03■□□□□ 0.48
COG3-201ENST00000349995 EIF2S2P20042 333 aaKnown RBP18.03■□□□□ 0.48
COG3-201ENST00000349995 PSME1Q06323 249 aa18.03■□□□□ 0.48
COG3-201ENST00000349995 PES1O00541 588 aaKnown RBP18.02■□□□□ 0.48
COG3-201ENST00000349995 SMC2O95347 1197 aa18.02■□□□□ 0.48
COG3-201ENST00000349995 GIMAP7Q8NHV1 300 aa18.02■□□□□ 0.48
COG3-201ENST00000349995 FBLN1P23142 703 aa18.02■□□□□ 0.47
COG3-201ENST00000349995 USP8P40818 1118 aa18.02■□□□□ 0.47
COG3-201ENST00000349995 TRMT1Q9NXH9 659 aaKnown RBP18.02■□□□□ 0.47
COG3-201ENST00000349995 PLCD4Q9BRC7 762 aa18.02■□□□□ 0.47
COG3-201ENST00000349995 RTEL1-TNFRSF6BF6WH68 1400 aa18.01■□□□□ 0.47
COG3-201ENST00000349995 PER1O15534 1290 aaPredicted RBP18.01■□□□□ 0.47
COG3-201ENST00000349995 FOSBP53539 338 aa18.01■□□□□ 0.47
COG3-201ENST00000349995 CENPHQ9H3R5 247 aa18.01■□□□□ 0.47
COG3-201ENST00000349995 NOL7Q9UMY1 257 aaKnown RBP18.01■□□□□ 0.47
COG3-201ENST00000349995 PDILTQ8N807 584 aa18.01■□□□□ 0.47
COG3-201ENST00000349995 THUMPD2Q9BTF0 503 aaKnown RBP18.01■□□□□ 0.47
COG3-201ENST00000349995 CEBPAP49715 358 aaPredicted RBP18■□□□□ 0.47
COG3-201ENST00000349995 SULT6B1Q6IMI4 303 aa18■□□□□ 0.47
COG3-201ENST00000349995 DENND4BO75064 1496 aaPredicted RBP18■□□□□ 0.47
COG3-201ENST00000349995 SHANK2Q9UPX8 1470 aa18■□□□□ 0.47
COG3-201ENST00000349995 WDR7Q9Y4E6 1490 aa18■□□□□ 0.47
COG3-201ENST00000349995 DMTNQ08495 405 aa18■□□□□ 0.47
COG3-201ENST00000349995 SDF4Q9BRK5 362 aa18■□□□□ 0.47
COG3-201ENST00000349995 LMAN1P49257 510 aa18■□□□□ 0.47
COG3-201ENST00000349995 CCDC73Q6ZRK6 1079 aa18■□□□□ 0.47
COG3-201ENST00000349995 CCDC102AQ96A19 550 aa18■□□□□ 0.47
COG3-201ENST00000349995 HS1BP3Q53T59 392 aa17.99■□□□□ 0.47
COG3-201ENST00000349995 RUFY1Q96T51 708 aa17.99■□□□□ 0.47
COG3-201ENST00000349995 DUSP27Q5VZP5 1158 aa17.99■□□□□ 0.47
COG3-201ENST00000349995 ADGRL2O95490 1459 aa17.99■□□□□ 0.47
COG3-201ENST00000349995 TEFQ10587 303 aa17.98■□□□□ 0.47
COG3-201ENST00000349995 KIF18AQ8NI77 898 aa17.98■□□□□ 0.47
COG3-201ENST00000349995 TSPYL4Q9UJ04 414 aa17.98■□□□□ 0.47
COG3-201ENST00000349995 HCLS1P14317 486 aaPredicted RBP17.98■□□□□ 0.47
COG3-201ENST00000349995 TERF1P54274 439 aa17.98■□□□□ 0.47
COG3-201ENST00000349995 NUDT16Q96DE0 195 aaKnown RBP17.98■□□□□ 0.47
COG3-201ENST00000349995 ATAD2Q6PL18 1390 aa17.98■□□□□ 0.47
COG3-201ENST00000349995 CCDC70Q6NSX1 233 aa17.98■□□□□ 0.47
COG3-201ENST00000349995 NOB1Q9ULX3 412 aaKnown RBP17.98■□□□□ 0.47
COG3-201ENST00000349995 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms