RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 COL18A1P39060 1754 aa36.21■■■■□ 3.39
SSBP4-202ENST00000348495 IL13P35225 146 aa36.21■■■■□ 3.39
SSBP4-202ENST00000348495 JCADQ9P266 1359 aa36.21■■■■□ 3.39
SSBP4-202ENST00000348495 HAP1P54257 671 aaPredicted RBP36.19■■■■□ 3.38
SSBP4-202ENST00000348495 EIF4A2Q14240 407 aaKnown RBP36.18■■■■□ 3.38
SSBP4-202ENST00000348495 WDR43Q15061 677 aaKnown RBP eCLIP36.18■■■■□ 3.38
SSBP4-202ENST00000348495 FBXO41Q8TF61 875 aa36.18■■■■□ 3.38
SSBP4-202ENST00000348495 BLMP54132 1417 aaPredicted RBP36.17■■■■□ 3.38
SSBP4-202ENST00000348495 ADAMTS8Q9UP79 889 aa36.17■■■■□ 3.38
SSBP4-202ENST00000348495 ZBTB7CA1YPR0 619 aa36.17■■■■□ 3.38
SSBP4-202ENST00000348495 NUDCQ9Y266 331 aa36.17■■■■□ 3.38
SSBP4-202ENST00000348495 AXIN2Q9Y2T1 843 aa36.14■■■■□ 3.38
SSBP4-202ENST00000348495 PRDM11Q9NQV5 511 aa36.13■■■■□ 3.37
SSBP4-202ENST00000348495 RGPD1P0DJD0 1748 aa36.13■■■■□ 3.37
SSBP4-202ENST00000348495 LMO7Q8WWI1 1683 aa36.13■■■■□ 3.37
SSBP4-202ENST00000348495 CHRNA2Q15822 529 aa36.12■■■■□ 3.37
SSBP4-202ENST00000348495 RGPD5Q99666 1765 aa36.11■■■■□ 3.37
SSBP4-202ENST00000348495 U2SURPO15042 1029 aaKnown RBP36.09■■■■□ 3.37
SSBP4-202ENST00000348495 U2AF1L5P0DN76 240 aaPredicted RBP36.08■■■■□ 3.37
SSBP4-202ENST00000348495 U2AF1Q01081 240 aaKnown RBP eCLIP36.08■■■■□ 3.37
SSBP4-202ENST00000348495 FAM83GA6ND36 823 aa36.07■■■■□ 3.36
SSBP4-202ENST00000348495 CAMTA1Q9Y6Y1 1673 aa36.06■■■■□ 3.36
SSBP4-202ENST00000348495 SPATA31A6Q5VVP1 1343 aa36.05■■■■□ 3.36
SSBP4-202ENST00000348495 ERBB3P21860 1342 aa36.05■■■■□ 3.36
SSBP4-202ENST00000348495 COL14A1Q05707 1796 aaKnown RBP36.04■■■■□ 3.36
SSBP4-202ENST00000348495 LTV1Q96GA3 475 aaPredicted RBP36.04■■■■□ 3.36
SSBP4-202ENST00000348495 ANKRD24Q8TF21 1146 aa36.03■■■■□ 3.36
SSBP4-202ENST00000348495 IGSF1Q8N6C5 1336 aa36.02■■■■□ 3.36
SSBP4-202ENST00000348495 EYA1Q99502 592 aa36.02■■■■□ 3.36
SSBP4-202ENST00000348495 NUTM2BA6NNL0 878 aaPredicted RBP36.01■■■■□ 3.36
SSBP4-202ENST00000348495 NUTM2EB1AL46 878 aaPredicted RBP36.01■■■■□ 3.36
SSBP4-202ENST00000348495 NUTM2AQ8IVF1 878 aaPredicted RBP36.01■■■■□ 3.36
SSBP4-202ENST00000348495 FCHSD2O94868 740 aa35.99■■■■□ 3.35
SSBP4-202ENST00000348495 COL5A2P05997 1499 aaPredicted RBP35.98■■■■□ 3.35
SSBP4-202ENST00000348495 ADAMTS2O95450 1211 aa35.98■■■■□ 3.35
SSBP4-202ENST00000348495 RSPH6AQ9H0K4 717 aa35.98■■■■□ 3.35
SSBP4-202ENST00000348495 KDRP35968 1356 aa35.98■■■■□ 3.35
SSBP4-202ENST00000348495 LRP6O75581 1613 aa35.97■■■■□ 3.35
SSBP4-202ENST00000348495 RGPD2P0DJD1 1756 aa35.96■■■■□ 3.35
SSBP4-202ENST00000348495 NCAPD2Q15021 1401 aa35.96■■■■□ 3.35
SSBP4-202ENST00000348495 FAM208AQ9UK61 1670 aaKnown RBP35.96■■■■□ 3.35
SSBP4-202ENST00000348495 HMOX1P09601 288 aa35.96■■■■□ 3.35
SSBP4-202ENST00000348495 NBPF6Q5VWK0 638 aa35.96■■■■□ 3.35
SSBP4-202ENST00000348495 NBPF4Q96M43 638 aa35.96■■■■□ 3.35
SSBP4-202ENST00000348495 YTHDC1Q96MU7 727 aaKnown RBP35.96■■■■□ 3.35
SSBP4-202ENST00000348495 PLEKHF1Q96S99 279 aa35.96■■■■□ 3.35
SSBP4-202ENST00000348495 SULT6B1Q6IMI4 303 aa35.94■■■■□ 3.34
SSBP4-202ENST00000348495 AEBP1Q8IUX7 1158 aa35.94■■■■□ 3.34
SSBP4-202ENST00000348495 CCDC146Q8IYE0 955 aa35.94■■■■□ 3.34
SSBP4-202ENST00000348495 RUNDC1Q96C34 613 aa35.93■■■■□ 3.34
SSBP4-202ENST00000348495 PLCH1Q4KWH8 1693 aa35.93■■■■□ 3.34
SSBP4-202ENST00000348495 BTG4Q9NY30 223 aa35.91■■■■□ 3.34
SSBP4-202ENST00000348495 PNNQ9H307 717 aaKnown RBP35.91■■■■□ 3.34
SSBP4-202ENST00000348495 WDR17Q8IZU2 1322 aa35.9■■■■□ 3.34
SSBP4-202ENST00000348495 PRKAR2BP31323 418 aa35.9■■■■□ 3.34
SSBP4-202ENST00000348495 HNRNPUQ00839 825 aaKnown RBP eCLIP35.88■■■■□ 3.34
SSBP4-202ENST00000348495 SLIT2O94813 1529 aa35.88■■■■□ 3.33
SSBP4-202ENST00000348495 NWD2Q9ULI1 1742 aa35.87■■■■□ 3.33
SSBP4-202ENST00000348495 CSB-PGBD3P0DP91 1061 aa35.87■■■■□ 3.33
SSBP4-202ENST00000348495 USHBP1Q8N6Y0 703 aa35.86■■■■□ 3.33
SSBP4-202ENST00000348495 NRAPQ86VF7 1730 aa35.86■■■■□ 3.33
SSBP4-202ENST00000348495 NLRP2Q9NX02 1062 aa35.85■■■■□ 3.33
SSBP4-202ENST00000348495 APAF1O14727 1248 aa35.83■■■■□ 3.33
SSBP4-202ENST00000348495 EVA1CP58658 441 aa35.83■■■■□ 3.33
SSBP4-202ENST00000348495 PHACTR3Q96KR7 559 aa35.83■■■■□ 3.33
SSBP4-202ENST00000348495 LARP1Q6PKG0 1096 aaKnown RBP35.82■■■■□ 3.32
SSBP4-202ENST00000348495 STRN4Q9NRL3 753 aa35.82■■■■□ 3.32
SSBP4-202ENST00000348495 TCP11L2Q8N4U5 519 aa35.81■■■■□ 3.32
SSBP4-202ENST00000348495 MAPK8IP3Q9UPT6 1336 aa35.8■■■■□ 3.32
SSBP4-202ENST00000348495 CRB1P82279 1406 aa35.79■■■■□ 3.32
SSBP4-202ENST00000348495 TOM1L2Q6ZVM7 507 aa35.79■■■■□ 3.32
SSBP4-202ENST00000348495 C8orf37Q96NL8 207 aa35.79■■■■□ 3.32
SSBP4-202ENST00000348495 SENP3-EIF4A1A0A087X0R7 540 aa35.78■■■■□ 3.32
SSBP4-202ENST00000348495 FNBP4Q8N3X1 1017 aaPredicted RBP35.78■■■■□ 3.32
SSBP4-202ENST00000348495 CARD10Q9BWT7 1032 aa35.78■■■■□ 3.32
SSBP4-202ENST00000348495 NGLY1Q96IV0 654 aa35.77■■■■□ 3.32
SSBP4-202ENST00000348495 ZBED9Q6R2W3 1325 aa35.75■■■■□ 3.31
SSBP4-202ENST00000348495 BCL9LQ86UU0 1499 aa35.75■■■■□ 3.31
SSBP4-202ENST00000348495 NEFMP07197 916 aa35.75■■■■□ 3.31
SSBP4-202ENST00000348495 NCBP3Q53F19 620 aaKnown RBP35.74■■■■□ 3.31
SSBP4-202ENST00000348495 NGEFQ8N5V2 710 aa35.74■■■■□ 3.31
SSBP4-202ENST00000348495 TMPOP42166 694 aaKnown RBP35.73■■■■□ 3.31
SSBP4-202ENST00000348495 MEX3CQ5U5Q3 659 aaKnown RBP35.71■■■■□ 3.31
SSBP4-202ENST00000348495 UNC5CLQ8IV45 518 aa35.71■■■■□ 3.31
SSBP4-202ENST00000348495 PLEKHG2Q9H7P9 1386 aa35.71■■■■□ 3.31
SSBP4-202ENST00000348495 RRP7AQ9Y3A4 280 aaKnown RBP35.71■■■■□ 3.31
SSBP4-202ENST00000348495 NFE2L2Q16236 605 aa35.7■■■■□ 3.31
SSBP4-202ENST00000348495 MEGF6O75095 1541 aa35.69■■■■□ 3.3
SSBP4-202ENST00000348495 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.69■■■■□ 3.3
SSBP4-202ENST00000348495 PHF23Q9BUL5 403 aaPredicted RBP35.69■■■■□ 3.3
SSBP4-202ENST00000348495 SALL2Q9Y467 1007 aaPredicted RBP35.68■■■■□ 3.3
SSBP4-202ENST00000348495 MTHFSDQ2M296 383 aaKnown RBP35.66■■■■□ 3.3
SSBP4-202ENST00000348495 RAPGEF4Q8WZA2 1011 aa35.66■■■■□ 3.3
SSBP4-202ENST00000348495 ZNF521Q96K83 1311 aa35.66■■■■□ 3.3
SSBP4-202ENST00000348495 NEUROD2Q15784 382 aa35.66■■■■□ 3.3
SSBP4-202ENST00000348495 CCDC27Q2M243 656 aa35.66■■■■□ 3.3
SSBP4-202ENST00000348495 RIPK4P57078 832 aa35.64■■■■□ 3.3
SSBP4-202ENST00000348495 SPATA31A1Q5TZJ5 1347 aa35.64■■■■□ 3.3
SSBP4-202ENST00000348495 SPATA31A5Q5VU36 1347 aa35.63■■■■□ 3.29
SSBP4-202ENST00000348495 SPATA31A7Q8IWB4 1347 aa35.63■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms