RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 HAP1P54257 671 aaPredicted RBP27.56■■■□□ 2
CLDND1-201ENST00000341181 EIF4A2Q14240 407 aaKnown RBP27.56■■■□□ 2
CLDND1-201ENST00000341181 CHRNA2Q15822 529 aa27.56■■■□□ 2
CLDND1-201ENST00000341181 WDR43Q15061 677 aaKnown RBP eCLIP27.55■■■□□ 2
CLDND1-201ENST00000341181 AXIN2Q9Y2T1 843 aa27.55■■■□□ 2
CLDND1-201ENST00000341181 CPDO75976 1380 aa27.55■■■□□ 2
CLDND1-201ENST00000341181 IL13P35225 146 aa27.55■■■□□ 2
CLDND1-201ENST00000341181 IP6K1Q92551 441 aa27.54■■■□□ 2
CLDND1-201ENST00000341181 COL18A1P39060 1754 aa27.53■■■□□ 2
CLDND1-201ENST00000341181 U2SURPO15042 1029 aaKnown RBP27.53■■■□□ 2
CLDND1-201ENST00000341181 RGPD5Q99666 1765 aa27.53■■■□□ 2
CLDND1-201ENST00000341181 SENP3-EIF4A1A0A087X0R7 540 aa27.52■■■□□ 2
CLDND1-201ENST00000341181 LTV1Q96GA3 475 aaPredicted RBP27.5■■□□□ 1.99
CLDND1-201ENST00000341181 PRDM11Q9NQV5 511 aa27.5■■□□□ 1.99
CLDND1-201ENST00000341181 JCADQ9P266 1359 aa27.49■■□□□ 1.99
CLDND1-201ENST00000341181 U2AF1L5P0DN76 240 aaPredicted RBP27.49■■□□□ 1.99
CLDND1-201ENST00000341181 U2AF1Q01081 240 aaKnown RBP eCLIP27.49■■□□□ 1.99
CLDND1-201ENST00000341181 RGPD1P0DJD0 1748 aa27.49■■□□□ 1.99
CLDND1-201ENST00000341181 LMO7Q8WWI1 1683 aa27.48■■□□□ 1.99
CLDND1-201ENST00000341181 BLMP54132 1417 aaPredicted RBP27.47■■□□□ 1.99
CLDND1-201ENST00000341181 NUDCQ9Y266 331 aa27.47■■□□□ 1.99
CLDND1-201ENST00000341181 CCDC146Q8IYE0 955 aa27.46■■□□□ 1.99
CLDND1-201ENST00000341181 NUTM2BA6NNL0 878 aaPredicted RBP27.46■■□□□ 1.99
CLDND1-201ENST00000341181 NUTM2EB1AL46 878 aaPredicted RBP27.46■■□□□ 1.99
CLDND1-201ENST00000341181 NUTM2AQ8IVF1 878 aaPredicted RBP27.46■■□□□ 1.99
CLDND1-201ENST00000341181 ABCC6O95255 1503 aa27.46■■□□□ 1.99
CLDND1-201ENST00000341181 CAMTA1Q9Y6Y1 1673 aa27.45■■□□□ 1.99
CLDND1-201ENST00000341181 FAM83GA6ND36 823 aa27.45■■□□□ 1.98
CLDND1-201ENST00000341181 ADAMTS2O95450 1211 aa27.44■■□□□ 1.98
CLDND1-201ENST00000341181 HMOX1P09601 288 aa27.44■■□□□ 1.98
CLDND1-201ENST00000341181 ERBB3P21860 1342 aa27.44■■□□□ 1.98
CLDND1-201ENST00000341181 AEBP1Q8IUX7 1158 aa27.43■■□□□ 1.98
CLDND1-201ENST00000341181 ANKRD24Q8TF21 1146 aa27.43■■□□□ 1.98
CLDND1-201ENST00000341181 RGPD2P0DJD1 1756 aa27.43■■□□□ 1.98
CLDND1-201ENST00000341181 EYA1Q99502 592 aa27.42■■□□□ 1.98
CLDND1-201ENST00000341181 LRP6O75581 1613 aa27.41■■□□□ 1.98
CLDND1-201ENST00000341181 IGSF1Q8N6C5 1336 aa27.4■■□□□ 1.98
CLDND1-201ENST00000341181 HNRNPUQ00839 825 aaKnown RBP eCLIP27.4■■□□□ 1.98
CLDND1-201ENST00000341181 USHBP1Q8N6Y0 703 aa27.4■■□□□ 1.98
CLDND1-201ENST00000341181 RSPH6AQ9H0K4 717 aa27.39■■□□□ 1.98
CLDND1-201ENST00000341181 COL5A2P05997 1499 aaPredicted RBP27.39■■□□□ 1.98
CLDND1-201ENST00000341181 NBPF6Q5VWK0 638 aa27.39■■□□□ 1.97
CLDND1-201ENST00000341181 NBPF4Q96M43 638 aa27.39■■□□□ 1.97
CLDND1-201ENST00000341181 COL14A1Q05707 1796 aaKnown RBP27.38■■□□□ 1.97
CLDND1-201ENST00000341181 SULT6B1Q6IMI4 303 aa27.38■■□□□ 1.97
CLDND1-201ENST00000341181 GTF3C3Q9Y5Q9 886 aa27.38■■□□□ 1.97
CLDND1-201ENST00000341181 PLEKHF1Q96S99 279 aa27.36■■□□□ 1.97
CLDND1-201ENST00000341181 PLCH1Q4KWH8 1693 aa27.36■■□□□ 1.97
CLDND1-201ENST00000341181 KDRP35968 1356 aa27.35■■□□□ 1.97
CLDND1-201ENST00000341181 PRKAR2BP31323 418 aa27.35■■□□□ 1.97
CLDND1-201ENST00000341181 BTG4Q9NY30 223 aa27.35■■□□□ 1.97
CLDND1-201ENST00000341181 SPATA31A6Q5VVP1 1343 aa27.34■■□□□ 1.97
CLDND1-201ENST00000341181 FCHSD2O94868 740 aa27.33■■□□□ 1.97
CLDND1-201ENST00000341181 APAF1O14727 1248 aa27.32■■□□□ 1.96
CLDND1-201ENST00000341181 CSB-PGBD3P0DP91 1061 aa27.32■■□□□ 1.96
CLDND1-201ENST00000341181 RUNDC1Q96C34 613 aa27.32■■□□□ 1.96
CLDND1-201ENST00000341181 STRN4Q9NRL3 753 aa27.32■■□□□ 1.96
CLDND1-201ENST00000341181 SALL2Q9Y467 1007 aaPredicted RBP27.32■■□□□ 1.96
CLDND1-201ENST00000341181 NCAPD2Q15021 1401 aa27.32■■□□□ 1.96
CLDND1-201ENST00000341181 PHACTR3Q96KR7 559 aa27.31■■□□□ 1.96
CLDND1-201ENST00000341181 FAM208AQ9UK61 1670 aaKnown RBP27.3■■□□□ 1.96
CLDND1-201ENST00000341181 WDR17Q8IZU2 1322 aa27.3■■□□□ 1.96
CLDND1-201ENST00000341181 NLRP2Q9NX02 1062 aa27.3■■□□□ 1.96
CLDND1-201ENST00000341181 LARP1Q6PKG0 1096 aaKnown RBP27.29■■□□□ 1.96
CLDND1-201ENST00000341181 FBXO41Q8TF61 875 aa27.29■■□□□ 1.96
CLDND1-201ENST00000341181 RRP7AQ9Y3A4 280 aaKnown RBP27.28■■□□□ 1.96
CLDND1-201ENST00000341181 NRAPQ86VF7 1730 aa27.28■■□□□ 1.96
CLDND1-201ENST00000341181 TCP11L2Q8N4U5 519 aa27.28■■□□□ 1.96
CLDND1-201ENST00000341181 C8orf37Q96NL8 207 aa27.28■■□□□ 1.96
CLDND1-201ENST00000341181 SLIT2O94813 1529 aa27.27■■□□□ 1.96
CLDND1-201ENST00000341181 MAPK8IP3Q9UPT6 1336 aa27.26■■□□□ 1.95
CLDND1-201ENST00000341181 NEUROD2Q15784 382 aa27.25■■□□□ 1.95
CLDND1-201ENST00000341181 TOM1L2Q6ZVM7 507 aa27.25■■□□□ 1.95
CLDND1-201ENST00000341181 EVA1CP58658 441 aa27.24■■□□□ 1.95
CLDND1-201ENST00000341181 NWD2Q9ULI1 1742 aa27.23■■□□□ 1.95
CLDND1-201ENST00000341181 ZBED9Q6R2W3 1325 aa27.22■■□□□ 1.95
CLDND1-201ENST00000341181 MEGF6O75095 1541 aa27.22■■□□□ 1.95
CLDND1-201ENST00000341181 CRB1P82279 1406 aa27.21■■□□□ 1.95
CLDND1-201ENST00000341181 NGLY1Q96IV0 654 aa27.21■■□□□ 1.95
CLDND1-201ENST00000341181 PNNQ9H307 717 aaKnown RBP27.21■■□□□ 1.95
CLDND1-201ENST00000341181 USP35Q9P2H5 1018 aa27.21■■□□□ 1.95
CLDND1-201ENST00000341181 BCL9LQ86UU0 1499 aa27.2■■□□□ 1.94
CLDND1-201ENST00000341181 TMPOP42166 694 aaKnown RBP27.19■■□□□ 1.94
CLDND1-201ENST00000341181 MEX3CQ5U5Q3 659 aaKnown RBP27.18■■□□□ 1.94
CLDND1-201ENST00000341181 CARD10Q9BWT7 1032 aa27.18■■□□□ 1.94
CLDND1-201ENST00000341181 MTHFSDQ2M296 383 aaKnown RBP27.16■■□□□ 1.94
CLDND1-201ENST00000341181 NEFMP07197 916 aa27.16■■□□□ 1.94
CLDND1-201ENST00000341181 FNBP4Q8N3X1 1017 aaPredicted RBP27.16■■□□□ 1.94
CLDND1-201ENST00000341181 DLG5Q8TDM6 1919 aa27.16■■□□□ 1.94
CLDND1-201ENST00000341181 NFE2L2Q16236 605 aa27.15■■□□□ 1.94
CLDND1-201ENST00000341181 RIPK4P57078 832 aa27.14■■□□□ 1.93
CLDND1-201ENST00000341181 UNC5CLQ8IV45 518 aa27.14■■□□□ 1.93
CLDND1-201ENST00000341181 ZNF521Q96K83 1311 aa27.13■■□□□ 1.93
CLDND1-201ENST00000341181 TRIM35Q9UPQ4 493 aa27.13■■□□□ 1.93
CLDND1-201ENST00000341181 RAPGEF4Q8WZA2 1011 aa27.12■■□□□ 1.93
CLDND1-201ENST00000341181 PHF23Q9BUL5 403 aaPredicted RBP27.12■■□□□ 1.93
CLDND1-201ENST00000341181 WWC1Q8IX03 1113 aa27.11■■□□□ 1.93
CLDND1-201ENST00000341181 AFF2P51816 1311 aa27.11■■□□□ 1.93
CLDND1-201ENST00000341181 USP21Q9UK80 565 aa27.11■■□□□ 1.93
CLDND1-201ENST00000341181 OVOS2A0A0G2JMS6 1433 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms