RNA–Protein interactions for RNA: ENST00000339844.6

ZNF28-201, Transcript of zinc finger protein 28, humanhuman

TSL 4 BASIC

Gene ZNF28, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-201ENST00000339844 ROBO1Q9Y6N7 1651 aa8.56□□□□□ -1.04
ZNF28-201ENST00000339844 ARHGEF28Q8N1W1 1705 aaKnown RBP8.55□□□□□ -1.04
ZNF28-201ENST00000339844 C7P10643 843 aa8.55□□□□□ -1.04
ZNF28-201ENST00000339844 BRINP3Q76B58 766 aa8.55□□□□□ -1.04
ZNF28-201ENST00000339844 BOLA1Q9Y3E2 137 aa8.55□□□□□ -1.04
ZNF28-201ENST00000339844 ROCK2O75116 1388 aaKnown RBP8.55□□□□□ -1.04
ZNF28-201ENST00000339844 GPRASP1Q5JY77 1395 aa8.55□□□□□ -1.04
ZNF28-201ENST00000339844 C1orf167Q5SNV9 1468 aa8.55□□□□□ -1.04
ZNF28-201ENST00000339844 CDC42BPGQ6DT37 1551 aa8.55□□□□□ -1.04
ZNF28-201ENST00000339844 MINK1Q8N4C8 1332 aaPredicted RBP8.54□□□□□ -1.04
ZNF28-201ENST00000339844 RALGAPBQ86X10 1494 aa8.54□□□□□ -1.04
ZNF28-201ENST00000339844 NUTM2FA1L443 756 aa8.54□□□□□ -1.04
ZNF28-201ENST00000339844 PDCD7Q8N8D1 485 aaKnown RBP8.54□□□□□ -1.04
ZNF28-201ENST00000339844 DDX17Q92841 729 aaKnown RBP8.53□□□□□ -1.04
ZNF28-201ENST00000339844 ORAI2Q96SN7 254 aa8.53□□□□□ -1.04
ZNF28-201ENST00000339844 ADGRB2O60241 1585 aa8.52□□□□□ -1.04
ZNF28-201ENST00000339844 KTN1Q86UP2 1357 aaKnown RBP8.52□□□□□ -1.05
ZNF28-201ENST00000339844 MICALL2Q8IY33 904 aa8.52□□□□□ -1.05
ZNF28-201ENST00000339844 TMC2Q8TDI7 906 aa8.52□□□□□ -1.05
ZNF28-201ENST00000339844 DDX27Q96GQ7 796 aaKnown RBP8.52□□□□□ -1.05
ZNF28-201ENST00000339844 CARD11Q9BXL7 1154 aa8.52□□□□□ -1.05
ZNF28-201ENST00000339844 METRNQ9UJH8 293 aa8.52□□□□□ -1.05
ZNF28-201ENST00000339844 PRR36Q9H6K5 1346 aa8.52□□□□□ -1.05
ZNF28-201ENST00000339844 CENPJQ9HC77 1338 aaPredicted RBP8.52□□□□□ -1.05
ZNF28-201ENST00000339844 FMN2Q9NZ56 1722 aa8.51□□□□□ -1.05
ZNF28-201ENST00000339844 POTEB2H3BUK9 544 aa8.51□□□□□ -1.05
ZNF28-201ENST00000339844 WASLO00401 505 aaPredicted RBP8.51□□□□□ -1.05
ZNF28-201ENST00000339844 RNF123Q5XPI4 1314 aa8.51□□□□□ -1.05
ZNF28-201ENST00000339844 E2F4Q16254 413 aa8.5□□□□□ -1.05
ZNF28-201ENST00000339844 ESCO1Q5FWF5 840 aa8.5□□□□□ -1.05
ZNF28-201ENST00000339844 AHDC1Q5TGY3 1603 aaPredicted RBP8.5□□□□□ -1.05
ZNF28-201ENST00000339844 USP32Q8NFA0 1604 aa8.5□□□□□ -1.05
ZNF28-201ENST00000339844 SMG6Q86US8 1419 aaKnown RBP8.49□□□□□ -1.05
ZNF28-201ENST00000339844 CDK19Q9BWU1 502 aa8.49□□□□□ -1.05
ZNF28-201ENST00000339844 MRS2Q9HD23 443 aa8.49□□□□□ -1.05
ZNF28-201ENST00000339844 COL16A1Q07092 1604 aaPredicted RBP8.49□□□□□ -1.05
ZNF28-201ENST00000339844 NHSL1Q5SYE7 1610 aa8.49□□□□□ -1.05
ZNF28-201ENST00000339844 QRICH2Q9H0J4 1663 aa8.49□□□□□ -1.05
ZNF28-201ENST00000339844 TULP4Q9NRJ4 1543 aa8.49□□□□□ -1.05
ZNF28-201ENST00000339844 PHLPP1O60346 1717 aa8.49□□□□□ -1.05
ZNF28-201ENST00000339844 RGPD8O14715 1765 aaPredicted RBP8.48□□□□□ -1.05
ZNF28-201ENST00000339844 ANKARQ7Z5J8 1434 aa8.48□□□□□ -1.05
ZNF28-201ENST00000339844 C11orf95C9JLR9 678 aaPredicted RBP8.48□□□□□ -1.05
ZNF28-201ENST00000339844 FOXO3O43524 673 aa8.48□□□□□ -1.05
ZNF28-201ENST00000339844 XPCQ01831 940 aaPredicted RBP8.48□□□□□ -1.05
ZNF28-201ENST00000339844 CRISPLD2Q9H0B8 497 aa8.48□□□□□ -1.05
ZNF28-201ENST00000339844 COLQQ9Y215 455 aaPredicted RBP8.48□□□□□ -1.05
ZNF28-201ENST00000339844 ATP7BP35670 1465 aa8.48□□□□□ -1.05
ZNF28-201ENST00000339844 EIF3AQ14152 1382 aaKnown RBP8.48□□□□□ -1.05
ZNF28-201ENST00000339844 C3orf67Q6ZVT6 689 aa8.47□□□□□ -1.05
ZNF28-201ENST00000339844 PMFBP1Q8TBY8 1022 aa8.47□□□□□ -1.05
ZNF28-201ENST00000339844 KCNV2Q8TDN2 545 aa8.47□□□□□ -1.05
ZNF28-201ENST00000339844 NUDT16Q96DE0 195 aaKnown RBP8.47□□□□□ -1.05
ZNF28-201ENST00000339844 SOS2Q07890 1332 aaPredicted RBP8.47□□□□□ -1.05
ZNF28-201ENST00000339844 KIF7Q2M1P5 1343 aa8.47□□□□□ -1.05
ZNF28-201ENST00000339844 USP47Q96K76 1375 aa8.47□□□□□ -1.05
ZNF28-201ENST00000339844 PXDNQ92626 1479 aa8.46□□□□□ -1.05
ZNF28-201ENST00000339844 ST20-MTHFSA0A0A6YYL1 179 aa8.46□□□□□ -1.06
ZNF28-201ENST00000339844 TESK2Q96S53 571 aa8.46□□□□□ -1.06
ZNF28-201ENST00000339844 GPHNQ9NQX3 736 aaPredicted RBP8.46□□□□□ -1.06
ZNF28-201ENST00000339844 NPHP3Q7Z494 1330 aa8.46□□□□□ -1.06
ZNF28-201ENST00000339844 INSRP06213 1382 aa8.46□□□□□ -1.06
ZNF28-201ENST00000339844 SBNO2Q9Y2G9 1366 aa8.46□□□□□ -1.06
ZNF28-201ENST00000339844 SRPK2P78362 688 aaKnown RBP8.45□□□□□ -1.06
ZNF28-201ENST00000339844 RALBP1Q15311 655 aa8.45□□□□□ -1.06
ZNF28-201ENST00000339844 PPP1R15BQ5SWA1 713 aa8.45□□□□□ -1.06
ZNF28-201ENST00000339844 ERICH6Q7L0X2 663 aa8.45□□□□□ -1.06
ZNF28-201ENST00000339844 NUDCQ9Y266 331 aa8.45□□□□□ -1.06
ZNF28-201ENST00000339844 JCADQ9P266 1359 aa8.45□□□□□ -1.06
ZNF28-201ENST00000339844 KIF1AQ12756 1690 aa8.44□□□□□ -1.06
ZNF28-201ENST00000339844 PDE3BQ13370 1112 aa8.44□□□□□ -1.06
ZNF28-201ENST00000339844 MFSD10Q14728 455 aa8.44□□□□□ -1.06
ZNF28-201ENST00000339844 KRT28Q7Z3Y7 464 aa8.44□□□□□ -1.06
ZNF28-201ENST00000339844 FAM9BQ8IZU0 186 aa8.44□□□□□ -1.06
ZNF28-201ENST00000339844 LRRC59Q96AG4 307 aaKnown RBP8.44□□□□□ -1.06
ZNF28-201ENST00000339844 EVC2Q86UK5 1308 aa8.44□□□□□ -1.06
ZNF28-201ENST00000339844 PNPLA6Q8IY17 1366 aa8.44□□□□□ -1.06
ZNF28-201ENST00000339844 TOPAZ1Q8N9V7 1692 aa8.43□□□□□ -1.06
ZNF28-201ENST00000339844 PLEKHG3A1L390 1219 aa8.43□□□□□ -1.06
ZNF28-201ENST00000339844 TULP1O00294 542 aaPredicted RBP8.43□□□□□ -1.06
ZNF28-201ENST00000339844 CCDC184Q52MB2 194 aa8.43□□□□□ -1.06
ZNF28-201ENST00000339844 ARHGEF1Q92888 912 aaKnown RBP8.43□□□□□ -1.06
ZNF28-201ENST00000339844 TMEM121BQ9BXQ6 578 aaPredicted RBP8.43□□□□□ -1.06
ZNF28-201ENST00000339844 PPIP5K1Q6PFW1 1433 aa8.43□□□□□ -1.06
ZNF28-201ENST00000339844 LRP6O75581 1613 aa8.43□□□□□ -1.06
ZNF28-201ENST00000339844 PSME1Q06323 249 aa8.42□□□□□ -1.06
ZNF28-201ENST00000339844 NGDNQ8NEJ9 315 aaKnown RBP8.42□□□□□ -1.06
ZNF28-201ENST00000339844 PNISRQ8TF01 805 aaKnown RBP8.42□□□□□ -1.06
ZNF28-201ENST00000339844 CABP1Q9NZU7 370 aa8.42□□□□□ -1.06
ZNF28-201ENST00000339844 ACEP12821 1306 aa8.42□□□□□ -1.06
ZNF28-201ENST00000339844 SPATA31A3Q5VYP0 1347 aa8.42□□□□□ -1.06
ZNF28-201ENST00000339844 POLR3AO14802 1390 aaPredicted RBP8.42□□□□□ -1.06
ZNF28-201ENST00000339844 BRD4O60885 1362 aaPredicted RBP8.42□□□□□ -1.06
ZNF28-201ENST00000339844 DISP3Q9P2K9 1392 aa8.42□□□□□ -1.06
ZNF28-201ENST00000339844 MED1Q15648 1581 aaPredicted RBP8.42□□□□□ -1.06
ZNF28-201ENST00000339844 SHPRHQ149N8 1683 aa8.42□□□□□ -1.06
ZNF28-201ENST00000339844 ITSN1Q15811 1721 aa8.41□□□□□ -1.06
ZNF28-201ENST00000339844 SBNO1A3KN83 1393 aa8.41□□□□□ -1.06
ZNF28-201ENST00000339844 TRPM3Q9HCF6 1732 aaPredicted RBP8.4□□□□□ -1.06
ZNF28-201ENST00000339844 TNS3Q68CZ2 1445 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms