RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 UNC5CLQ8IV45 518 aa20.87■□□□□ 0.93
SEC13-201ENST00000337354 NFAT5O94916 1531 aa20.87■□□□□ 0.93
SEC13-201ENST00000337354 CDK12Q9NYV4 1490 aaPredicted RBP20.86■□□□□ 0.93
SEC13-201ENST00000337354 RRS1Q15050 365 aaKnown RBP20.86■□□□□ 0.93
SEC13-201ENST00000337354 IP6K1Q92551 441 aa20.86■□□□□ 0.93
SEC13-201ENST00000337354 POLKQ9UBT6 870 aa20.86■□□□□ 0.93
SEC13-201ENST00000337354 RGS12O14924 1447 aa20.86■□□□□ 0.93
SEC13-201ENST00000337354 RBM6P78332 1123 aaKnown RBP20.85■□□□□ 0.93
SEC13-201ENST00000337354 EVA1CP58658 441 aa20.85■□□□□ 0.93
SEC13-201ENST00000337354 CNGB1Q14028 1251 aaPredicted RBP20.84■□□□□ 0.93
SEC13-201ENST00000337354 RALBP1Q15311 655 aa20.84■□□□□ 0.93
SEC13-201ENST00000337354 AXIN2Q9Y2T1 843 aa20.84■□□□□ 0.93
SEC13-201ENST00000337354 GLI3P10071 1580 aa20.83■□□□□ 0.93
SEC13-201ENST00000337354 KIF20BQ96Q89 1820 aa20.83■□□□□ 0.92
SEC13-201ENST00000337354 HOXC9P31274 260 aa20.83■□□□□ 0.92
SEC13-201ENST00000337354 RTL1A6NKG5 1358 aa20.83■□□□□ 0.92
SEC13-201ENST00000337354 CCDC9Q9Y3X0 531 aaKnown RBP20.82■□□□□ 0.92
SEC13-201ENST00000337354 EMILIN1Q9Y6C2 1016 aa20.82■□□□□ 0.92
SEC13-201ENST00000337354 PPM1GO15355 546 aaPredicted RBP20.81■□□□□ 0.92
SEC13-201ENST00000337354 BLMP54132 1417 aaPredicted RBP20.81■□□□□ 0.92
SEC13-201ENST00000337354 LMO7Q8WWI1 1683 aa20.8■□□□□ 0.92
SEC13-201ENST00000337354 ABCC6O95255 1503 aa20.8■□□□□ 0.92
SEC13-201ENST00000337354 FLT4P35916 1363 aa20.8■□□□□ 0.92
SEC13-201ENST00000337354 VPS72Q15906 364 aa20.8■□□□□ 0.92
SEC13-201ENST00000337354 STRN4Q9NRL3 753 aa20.79■□□□□ 0.92
SEC13-201ENST00000337354 INSRP06213 1382 aa20.78■□□□□ 0.92
SEC13-201ENST00000337354 PARD3Q8TEW0 1356 aa20.78■□□□□ 0.92
SEC13-201ENST00000337354 MTHFSP49914 203 aa20.78■□□□□ 0.92
SEC13-201ENST00000337354 HSP90AB2PQ58FF8 381 aa20.78■□□□□ 0.92
SEC13-201ENST00000337354 CAMTA1Q9Y6Y1 1673 aa20.78■□□□□ 0.92
SEC13-201ENST00000337354 ANKRD24Q8TF21 1146 aa20.77■□□□□ 0.92
SEC13-201ENST00000337354 GJD4Q96KN9 370 aaPredicted RBP20.77■□□□□ 0.92
SEC13-201ENST00000337354 LTN1O94822 1766 aa20.77■□□□□ 0.92
SEC13-201ENST00000337354 ERBB3P21860 1342 aa20.76■□□□□ 0.91
SEC13-201ENST00000337354 WDR17Q8IZU2 1322 aa20.76■□□□□ 0.91
SEC13-201ENST00000337354 CSB-PGBD3P0DP91 1061 aa20.76■□□□□ 0.91
SEC13-201ENST00000337354 PPP2R1AP30153 589 aa20.76■□□□□ 0.91
SEC13-201ENST00000337354 PRKRIP1Q9H875 184 aaPredicted RBP20.76■□□□□ 0.91
SEC13-201ENST00000337354 BRWD3Q6RI45 1802 aa20.76■□□□□ 0.91
SEC13-201ENST00000337354 LARP1Q6PKG0 1096 aaKnown RBP20.75■□□□□ 0.91
SEC13-201ENST00000337354 COL5A2P05997 1499 aaPredicted RBP20.75■□□□□ 0.91
SEC13-201ENST00000337354 SMG6Q86US8 1419 aaKnown RBP20.75■□□□□ 0.91
SEC13-201ENST00000337354 RGPD5Q99666 1765 aa20.75■□□□□ 0.91
SEC13-201ENST00000337354 ANKRD26Q9UPS8 1709 aa20.75■□□□□ 0.91
SEC13-201ENST00000337354 TOM1L2Q6ZVM7 507 aa20.74■□□□□ 0.91
SEC13-201ENST00000337354 SPATA31A5Q5VU36 1347 aa20.73■□□□□ 0.91
SEC13-201ENST00000337354 SPATA31A7Q8IWB4 1347 aa20.73■□□□□ 0.91
SEC13-201ENST00000337354 ANP32CO43423 234 aa20.72■□□□□ 0.91
SEC13-201ENST00000337354 LTV1Q96GA3 475 aaPredicted RBP20.72■□□□□ 0.91
SEC13-201ENST00000337354 CARD10Q9BWT7 1032 aa20.72■□□□□ 0.91
SEC13-201ENST00000337354 THRAP3Q9Y2W1 955 aaKnown RBP20.72■□□□□ 0.91
SEC13-201ENST00000337354 COL18A1P39060 1754 aa20.72■□□□□ 0.91
SEC13-201ENST00000337354 CRB1P82279 1406 aa20.72■□□□□ 0.91
SEC13-201ENST00000337354 A0A0G2JS52 829 aa20.72■□□□□ 0.91
SEC13-201ENST00000337354 MYT1Q01538 1121 aa20.72■□□□□ 0.91
SEC13-201ENST00000337354 CFAP53Q96M91 514 aa20.72■□□□□ 0.91
SEC13-201ENST00000337354 SPATA31A1Q5TZJ5 1347 aa20.71■□□□□ 0.91
SEC13-201ENST00000337354 MYBBP1AQ9BQG0 1328 aaKnown RBP20.71■□□□□ 0.91
SEC13-201ENST00000337354 NLRP2Q9NX02 1062 aa20.71■□□□□ 0.91
SEC13-201ENST00000337354 TCP11L2Q8N4U5 519 aa20.7■□□□□ 0.9
SEC13-201ENST00000337354 ONECUT3O60422 494 aaPredicted RBP20.69■□□□□ 0.9
SEC13-201ENST00000337354 EIF4A2Q14240 407 aaKnown RBP20.69■□□□□ 0.9
SEC13-201ENST00000337354 BARGINQ6ZT62 677 aa20.69■□□□□ 0.9
SEC13-201ENST00000337354 THSD7AQ9UPZ6 1657 aa20.67■□□□□ 0.9
SEC13-201ENST00000337354 DIAPH1O60610 1272 aaKnown RBP20.67■□□□□ 0.9
SEC13-201ENST00000337354 USP35Q9P2H5 1018 aa20.67■□□□□ 0.9
SEC13-201ENST00000337354 WNK3Q9BYP7 1800 aa20.67■□□□□ 0.9
SEC13-201ENST00000337354 IL13P35225 146 aa20.66■□□□□ 0.9
SEC13-201ENST00000337354 NBPF6Q5VWK0 638 aa20.66■□□□□ 0.9
SEC13-201ENST00000337354 NBPF4Q96M43 638 aa20.66■□□□□ 0.9
SEC13-201ENST00000337354 CDCA7Q9BWT1 371 aaPredicted RBP20.66■□□□□ 0.9
SEC13-201ENST00000337354 FAM98CQ17RN3 349 aaKnown RBP20.65■□□□□ 0.9
SEC13-201ENST00000337354 PEAK1Q9H792 1746 aa20.64■□□□□ 0.9
SEC13-201ENST00000337354 EYA1Q99502 592 aa20.64■□□□□ 0.89
SEC13-201ENST00000337354 NUDCQ9Y266 331 aa20.64■□□□□ 0.89
SEC13-201ENST00000337354 SEPT12Q8IYM1 358 aa20.63■□□□□ 0.89
SEC13-201ENST00000337354 DIEXFQ68CQ4 756 aaKnown RBP20.62■□□□□ 0.89
SEC13-201ENST00000337354 MAP2P11137 1827 aaKnown RBP20.62■□□□□ 0.89
SEC13-201ENST00000337354 IL2RBP14784 551 aa20.6■□□□□ 0.89
SEC13-201ENST00000337354 IGSF1Q8N6C5 1336 aa20.6■□□□□ 0.89
SEC13-201ENST00000337354 FAM208AQ9UK61 1670 aaKnown RBP20.59■□□□□ 0.89
SEC13-201ENST00000337354 PARP4Q9UKK3 1724 aaKnown RBP20.59■□□□□ 0.89
SEC13-201ENST00000337354 RAPGEF4Q8WZA2 1011 aa20.59■□□□□ 0.89
SEC13-201ENST00000337354 UPF1Q92900 1129 aaKnown RBP eCLIP20.58■□□□□ 0.88
SEC13-201ENST00000337354 U2SURPO15042 1029 aaKnown RBP20.57■□□□□ 0.88
SEC13-201ENST00000337354 USHBP1Q8N6Y0 703 aa20.57■□□□□ 0.88
SEC13-201ENST00000337354 LRRC37A3O60309 1634 aa20.56■□□□□ 0.88
SEC13-201ENST00000337354 COL3A1P02461 1466 aaPredicted RBP20.56■□□□□ 0.88
SEC13-201ENST00000337354 NCAPD2Q15021 1401 aa20.56■□□□□ 0.88
SEC13-201ENST00000337354 EXOC5O00471 708 aa20.56■□□□□ 0.88
SEC13-201ENST00000337354 TATP17735 454 aaPredicted RBP20.56■□□□□ 0.88
SEC13-201ENST00000337354 SULT6B1Q6IMI4 303 aa20.56■□□□□ 0.88
SEC13-201ENST00000337354 DDB1Q16531 1140 aa20.55■□□□□ 0.88
SEC13-201ENST00000337354 KRT27Q7Z3Y8 459 aa20.55■□□□□ 0.88
SEC13-201ENST00000337354 PLEKHG2Q9H7P9 1386 aa20.54■□□□□ 0.88
SEC13-201ENST00000337354 DISP2A7MBM2 1401 aa20.53■□□□□ 0.88
SEC13-201ENST00000337354 KDRP35968 1356 aa20.53■□□□□ 0.88
SEC13-201ENST00000337354 U2AF1L5P0DN76 240 aaPredicted RBP20.53■□□□□ 0.88
SEC13-201ENST00000337354 U2AF1Q01081 240 aaKnown RBP eCLIP20.53■□□□□ 0.88
SEC13-201ENST00000337354 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.53■□□□□ 0.884e-7■■■□□ 17.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms