RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 THOC2Q8NI27 1593 aaKnown RBP20.44■□□□□ 0.86
TRAPPC11-201ENST00000334690 DNAJC2Q99543 621 aaKnown RBP20.44■□□□□ 0.86
TRAPPC11-201ENST00000334690 SRGAP3O43295 1099 aa20.44■□□□□ 0.86
TRAPPC11-201ENST00000334690 MAPKBP1O60336 1514 aa20.43■□□□□ 0.86
TRAPPC11-201ENST00000334690 XBP1P17861 261 aa20.43■□□□□ 0.86
TRAPPC11-201ENST00000334690 SART3Q15020 963 aaKnown RBP20.43■□□□□ 0.86
TRAPPC11-201ENST00000334690 MTERF4Q7Z6M4 381 aaKnown RBP20.43■□□□□ 0.86
TRAPPC11-201ENST00000334690 VSIG10Q8N0Z9 540 aa20.42■□□□□ 0.86
TRAPPC11-201ENST00000334690 MAP7D2Q96T17 732 aa20.42■□□□□ 0.86
TRAPPC11-201ENST00000334690 TRIM5Q9C035 493 aa20.42■□□□□ 0.86
TRAPPC11-201ENST00000334690 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.42■□□□□ 0.86
TRAPPC11-201ENST00000334690 NSD2O96028 1365 aa20.42■□□□□ 0.86
TRAPPC11-201ENST00000334690 GRPEL1Q9HAV7 217 aa20.42■□□□□ 0.86
TRAPPC11-201ENST00000334690 ADGRL1O94910 1474 aa20.42■□□□□ 0.86
TRAPPC11-201ENST00000334690 GPATCH8Q9UKJ3 1502 aaKnown RBP20.42■□□□□ 0.86
TRAPPC11-201ENST00000334690 R3HCC1Q9Y3T6 440 aaKnown RBP20.41■□□□□ 0.86
TRAPPC11-201ENST00000334690 PDIA4P13667 645 aaKnown RBP20.41■□□□□ 0.86
TRAPPC11-201ENST00000334690 CD109Q6YHK3 1445 aa20.41■□□□□ 0.86
TRAPPC11-201ENST00000334690 OLFM4Q6UX06 510 aa20.41■□□□□ 0.86
TRAPPC11-201ENST00000334690 PTPRKQ15262 1439 aa20.4■□□□□ 0.86
TRAPPC11-201ENST00000334690 PCMTD1Q96MG8 357 aaPredicted RBP20.4■□□□□ 0.86
TRAPPC11-201ENST00000334690 THUMPD2Q9BTF0 503 aaKnown RBP20.4■□□□□ 0.86
TRAPPC11-201ENST00000334690 ZNF396Q96N95 335 aaPredicted RBP20.4■□□□□ 0.86
TRAPPC11-201ENST00000334690 BRMS1Q9HCU9 246 aa20.4■□□□□ 0.86
TRAPPC11-201ENST00000334690 KRT85P78386 507 aa20.39■□□□□ 0.85
TRAPPC11-201ENST00000334690 HMGN5P82970 282 aaKnown RBP20.39■□□□□ 0.85
TRAPPC11-201ENST00000334690 FBXW7Q969H0 707 aa20.39■□□□□ 0.85
TRAPPC11-201ENST00000334690 MSH5O43196 834 aa20.39■□□□□ 0.85
TRAPPC11-201ENST00000334690 CCDC158Q5M9N0 1113 aa20.38■□□□□ 0.85
TRAPPC11-201ENST00000334690 SPG7Q9UQ90 795 aa20.38■□□□□ 0.85
TRAPPC11-201ENST00000334690 GNAT3A8MTJ3 354 aa20.38■□□□□ 0.85
TRAPPC11-201ENST00000334690 ZSCAN31Q96LW9 406 aaPredicted RBP20.38■□□□□ 0.85
TRAPPC11-201ENST00000334690 BLOC1S2Q6QNY1 142 aa20.37■□□□□ 0.85
TRAPPC11-201ENST00000334690 DISP3Q9P2K9 1392 aa20.37■□□□□ 0.85
TRAPPC11-201ENST00000334690 MNS1Q8NEH6 495 aa20.37■□□□□ 0.85
TRAPPC11-201ENST00000334690 ARGLU1Q9NWB6 273 aaPredicted RBP20.37■□□□□ 0.85
TRAPPC11-201ENST00000334690 FAM135AQ9P2D6 1515 aa20.37■□□□□ 0.85
TRAPPC11-201ENST00000334690 CCDC192P0DO97 292 aa20.37■□□□□ 0.85
TRAPPC11-201ENST00000334690 KIF6Q6ZMV9 814 aa20.37■□□□□ 0.85
TRAPPC11-201ENST00000334690 WAPLQ7Z5K2 1190 aa20.37■□□□□ 0.85
TRAPPC11-201ENST00000334690 C14orf93Q9H972 538 aaKnown RBP20.37■□□□□ 0.85
TRAPPC11-201ENST00000334690 UGGT2Q9NYU1 1516 aa20.37■□□□□ 0.85
TRAPPC11-201ENST00000334690 IDI1Q13907 227 aa20.37■□□□□ 0.85
TRAPPC11-201ENST00000334690 IL1RAPL2Q9NP60 686 aa20.36■□□□□ 0.85
TRAPPC11-201ENST00000334690 ANKLE2Q86XL3 938 aa20.36■□□□□ 0.85
TRAPPC11-201ENST00000334690 TRIM34Q9BYJ4 488 aa20.36■□□□□ 0.85
TRAPPC11-201ENST00000334690 LARP1BQ659C4 914 aaKnown RBP20.36■□□□□ 0.85
TRAPPC11-201ENST00000334690 JMYQ8N9B5 988 aa20.36■□□□□ 0.85
TRAPPC11-201ENST00000334690 IL27Q8NEV9 243 aa20.36■□□□□ 0.85
TRAPPC11-201ENST00000334690 EXOC6BQ9Y2D4 811 aa20.36■□□□□ 0.85
TRAPPC11-201ENST00000334690 STK38Q15208 465 aa20.35■□□□□ 0.85
TRAPPC11-201ENST00000334690 TRIM27P14373 513 aa20.35■□□□□ 0.85
TRAPPC11-201ENST00000334690 RALGAPBQ86X10 1494 aa20.35■□□□□ 0.85
TRAPPC11-201ENST00000334690 CABP4P57796 275 aa20.35■□□□□ 0.85
TRAPPC11-201ENST00000334690 AACSQ86V21 672 aa20.35■□□□□ 0.85
TRAPPC11-201ENST00000334690 KIF1BPQ96EK5 621 aa20.35■□□□□ 0.85
TRAPPC11-201ENST00000334690 RBM33Q96EV2 1170 aaKnown RBP20.35■□□□□ 0.85
TRAPPC11-201ENST00000334690 SIL1Q9H173 461 aa20.35■□□□□ 0.85
TRAPPC11-201ENST00000334690 AMER1Q5JTC6 1135 aaPredicted RBP20.34■□□□□ 0.85
TRAPPC11-201ENST00000334690 KRT32Q14532 448 aa20.34■□□□□ 0.85
TRAPPC11-201ENST00000334690 POGZQ7Z3K3 1410 aa20.34■□□□□ 0.85
TRAPPC11-201ENST00000334690 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.34■□□□□ 0.853e-8■■■■■ 43.3
TRAPPC11-201ENST00000334690 BTBD11A6QL63 1104 aa20.34■□□□□ 0.85
TRAPPC11-201ENST00000334690 TEX35Q5T0J7 233 aa20.34■□□□□ 0.85
TRAPPC11-201ENST00000334690 KCNH5Q8NCM2 988 aa20.34■□□□□ 0.85
TRAPPC11-201ENST00000334690 DNAJC5BQ9UF47 199 aa20.34■□□□□ 0.85
TRAPPC11-201ENST00000334690 MCM10Q7L590 875 aa20.33■□□□□ 0.85
TRAPPC11-201ENST00000334690 ZNF771Q7L3S4 317 aaPredicted RBP20.32■□□□□ 0.84
TRAPPC11-201ENST00000334690 DHX29Q7Z478 1369 aaKnown RBP20.32■□□□□ 0.84
TRAPPC11-201ENST00000334690 IL16Q14005 1332 aa20.32■□□□□ 0.84
TRAPPC11-201ENST00000334690 GLRX3O76003 335 aaKnown RBP20.32■□□□□ 0.84
TRAPPC11-201ENST00000334690 MX1P20591 662 aa20.32■□□□□ 0.84
TRAPPC11-201ENST00000334690 SKAP1Q86WV1 359 aa20.32■□□□□ 0.84
TRAPPC11-201ENST00000334690 RAB11FIP3O75154 756 aa20.32■□□□□ 0.84
TRAPPC11-201ENST00000334690 NME9Q86XW9 330 aa20.32■□□□□ 0.84
TRAPPC11-201ENST00000334690 PPP6R1Q9UPN7 881 aa20.32■□□□□ 0.84
TRAPPC11-201ENST00000334690 ZNF608Q9ULD9 1512 aaPredicted RBP20.32■□□□□ 0.84
TRAPPC11-201ENST00000334690 NOS1P29475 1434 aa20.31■□□□□ 0.84
TRAPPC11-201ENST00000334690 RAD21O60216 631 aa20.31■□□□□ 0.84
TRAPPC11-201ENST00000334690 DHX8Q14562 1220 aaKnown RBP20.31■□□□□ 0.84
TRAPPC11-201ENST00000334690 WASLO00401 505 aaPredicted RBP20.31■□□□□ 0.84
TRAPPC11-201ENST00000334690 DCTN1Q14203 1278 aa20.31■□□□□ 0.84
TRAPPC11-201ENST00000334690 TTC39AQ5SRH9 613 aa20.31■□□□□ 0.84
TRAPPC11-201ENST00000334690 CWC27Q6UX04 472 aaKnown RBP20.31■□□□□ 0.84
TRAPPC11-201ENST00000334690 JAKMIP1Q96N16 626 aaKnown RBP20.31■□□□□ 0.84
TRAPPC11-201ENST00000334690 CNNM1Q9NRU3 951 aa20.31■□□□□ 0.84
TRAPPC11-201ENST00000334690 PDRG1Q9NUG6 133 aa20.31■□□□□ 0.84
TRAPPC11-201ENST00000334690 EMILIN1Q9Y6C2 1016 aa20.31■□□□□ 0.84
TRAPPC11-201ENST00000334690 ESPNB1AK53 854 aa20.31■□□□□ 0.84
TRAPPC11-201ENST00000334690 TNMDQ9H2S6 317 aa20.3■□□□□ 0.84
TRAPPC11-201ENST00000334690 RBM42Q9BTD8 480 aaKnown RBP20.3■□□□□ 0.84
TRAPPC11-201ENST00000334690 NUP160Q12769 1436 aa20.3■□□□□ 0.84
TRAPPC11-201ENST00000334690 MAP4K4O95819 1239 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC11-201ENST00000334690 CEP126Q9P2H0 1117 aa20.29■□□□□ 0.84
TRAPPC11-201ENST00000334690 TAF7Q15545 349 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC11-201ENST00000334690 MYL6BP14649 208 aa20.29■□□□□ 0.84
TRAPPC11-201ENST00000334690 CCDC57Q2TAC2 916 aa20.29■□□□□ 0.84
TRAPPC11-201ENST00000334690 TBC1D2Q9BYX2 928 aa20.29■□□□□ 0.84
TRAPPC11-201ENST00000334690 CTNNA3Q9UI47 895 aa20.29■□□□□ 0.84
TRAPPC11-201ENST00000334690 BMP2KLQ5H9B9 411 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms