RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 NFKBIBQ15653 356 aa18.3■□□□□ 0.52
PTPN21-201ENST00000328736 NOL7Q9UMY1 257 aaKnown RBP18.3■□□□□ 0.52
PTPN21-201ENST00000328736 NOB1Q9ULX3 412 aaKnown RBP18.3■□□□□ 0.52
PTPN21-201ENST00000328736 GOLGA6L10A6NI86 522 aa18.29■□□□□ 0.52
PTPN21-201ENST00000328736 SKIDA1Q1XH10 827 aa18.29■□□□□ 0.52
PTPN21-201ENST00000328736 PRAM1Q96QH2 718 aa18.29■□□□□ 0.52
PTPN21-201ENST00000328736 PPP1R1BQ9UD71 204 aaPredicted RBP18.29■□□□□ 0.52
PTPN21-201ENST00000328736 SPG7Q9UQ90 795 aa18.29■□□□□ 0.52
PTPN21-201ENST00000328736 BRD4O60885 1362 aaPredicted RBP18.29■□□□□ 0.52
PTPN21-201ENST00000328736 CCDC57Q2TAC2 916 aa18.29■□□□□ 0.52
PTPN21-201ENST00000328736 NEK4P51957 841 aa18.28■□□□□ 0.52
PTPN21-201ENST00000328736 PPFIBP1Q86W92 1011 aa18.28■□□□□ 0.52
PTPN21-201ENST00000328736 DEF6Q9H4E7 631 aa18.28■□□□□ 0.52
PTPN21-201ENST00000328736 CCDC184Q52MB2 194 aa18.28■□□□□ 0.52
PTPN21-201ENST00000328736 CYP46A1Q9Y6A2 500 aa18.28■□□□□ 0.52
PTPN21-201ENST00000328736 MAP4K4O95819 1239 aaPredicted RBP18.28■□□□□ 0.52
PTPN21-201ENST00000328736 CCT4P50991 539 aaKnown RBP18.28■□□□□ 0.52
PTPN21-201ENST00000328736 TWISTNBQ3B726 338 aaPredicted RBP18.28■□□□□ 0.52
PTPN21-201ENST00000328736 TXNDC2Q86VQ3 553 aa18.28■□□□□ 0.52
PTPN21-201ENST00000328736 PDZRN3Q9UPQ7 1066 aa18.28■□□□□ 0.52
PTPN21-201ENST00000328736 MPHOSPH10O00566 681 aaKnown RBP18.27■□□□□ 0.52
PTPN21-201ENST00000328736 SERPINC1P01008 464 aa18.27■□□□□ 0.52
PTPN21-201ENST00000328736 RBM5P52756 815 aaKnown RBP eCLIP18.27■□□□□ 0.51
PTPN21-201ENST00000328736 TANGO6Q9C0B7 1094 aa18.27■□□□□ 0.51
PTPN21-201ENST00000328736 SLC12A5Q9H2X9 1139 aa18.27■□□□□ 0.51
PTPN21-201ENST00000328736 ZHX3Q9H4I2 956 aa18.27■□□□□ 0.51
PTPN21-201ENST00000328736 CCDC181Q5TID7 509 aa18.26■□□□□ 0.51
PTPN21-201ENST00000328736 FMNL2Q96PY5 1086 aa18.26■□□□□ 0.51
PTPN21-201ENST00000328736 AXDND1Q5T1B0 1012 aaPredicted RBP18.26■□□□□ 0.51
PTPN21-201ENST00000328736 RNF214Q8ND24 703 aa18.26■□□□□ 0.51
PTPN21-201ENST00000328736 CDKL5O76039 1030 aa18.26■□□□□ 0.51
PTPN21-201ENST00000328736 MPHOSPH8Q99549 860 aa18.26■□□□□ 0.51
PTPN21-201ENST00000328736 NESP48681 1621 aa18.25■□□□□ 0.51
PTPN21-201ENST00000328736 CAVIN1Q6NZI2 390 aaKnown RBP18.25■□□□□ 0.51
PTPN21-201ENST00000328736 LEKR1Q6ZMV7 388 aa18.25■□□□□ 0.51
PTPN21-201ENST00000328736 BMP2KQ9NSY1 1161 aaPredicted RBP18.25■□□□□ 0.51
PTPN21-201ENST00000328736 CBFA2T2O43439 604 aa18.25■□□□□ 0.51
PTPN21-201ENST00000328736 TRIM21P19474 475 aaKnown RBP18.24■□□□□ 0.51
PTPN21-201ENST00000328736 HDGFL1Q5TGJ6 251 aa18.24■□□□□ 0.51
PTPN21-201ENST00000328736 TSPYL1Q9H0U9 437 aa18.24■□□□□ 0.51
PTPN21-201ENST00000328736 ANKRD62A6NC57 917 aa18.24■□□□□ 0.51
PTPN21-201ENST00000328736 TOM1L2Q6ZVM7 507 aa18.24■□□□□ 0.51
PTPN21-201ENST00000328736 CT47B1P0C2W7 299 aaPredicted RBP18.24■□□□□ 0.51
PTPN21-201ENST00000328736 LRRCC1Q9C099 1032 aa18.24■□□□□ 0.51
PTPN21-201ENST00000328736 ZNF692Q9BU19 519 aaPredicted RBP18.23■□□□□ 0.51
PTPN21-201ENST00000328736 STK11IPQ8N1F8 1099 aa18.23■□□□□ 0.51
PTPN21-201ENST00000328736 CEBPZQ03701 1054 aaKnown RBP18.23■□□□□ 0.51
PTPN21-201ENST00000328736 DNAI2Q9GZS0 605 aa18.23■□□□□ 0.51
PTPN21-201ENST00000328736 NEBLO76041 1014 aa18.22■□□□□ 0.51
PTPN21-201ENST00000328736 PRPF40AO75400 957 aaKnown RBP18.22■□□□□ 0.51
PTPN21-201ENST00000328736 CCDC192P0DO97 292 aa18.22■□□□□ 0.51
PTPN21-201ENST00000328736 CCDC66A2RUB6 948 aa18.22■□□□□ 0.51
PTPN21-201ENST00000328736 EZRP15311 586 aaKnown RBP18.22■□□□□ 0.51
PTPN21-201ENST00000328736 FIBPO43427 364 aa18.22■□□□□ 0.51
PTPN21-201ENST00000328736 NUP133Q8WUM0 1156 aa18.22■□□□□ 0.51
PTPN21-201ENST00000328736 CDK19Q9BWU1 502 aa18.22■□□□□ 0.51
PTPN21-201ENST00000328736 PRG4Q92954 1404 aaPredicted RBP18.22■□□□□ 0.51
PTPN21-201ENST00000328736 TRAK2O60296 914 aa18.22■□□□□ 0.51
PTPN21-201ENST00000328736 SRCIN1Q9C0H9 1055 aa18.22■□□□□ 0.51
PTPN21-201ENST00000328736 GOLGA6L7A0A1B0GV03 622 aa18.21■□□□□ 0.51
PTPN21-201ENST00000328736 IQCEQ6IPM2 695 aa18.21■□□□□ 0.51
PTPN21-201ENST00000328736 CTNNA3Q9UI47 895 aa18.21■□□□□ 0.51
PTPN21-201ENST00000328736 SLC4A2P04920 1241 aa18.21■□□□□ 0.51
PTPN21-201ENST00000328736 ENOX2Q16206 610 aaKnown RBP18.21■□□□□ 0.51
PTPN21-201ENST00000328736 MATR3P43243 847 aaKnown RBP eCLIP18.2■□□□□ 0.5
PTPN21-201ENST00000328736 TNMDQ9H2S6 317 aa18.2■□□□□ 0.5
PTPN21-201ENST00000328736 THEMISQ8N1K5 641 aaPredicted RBP18.2■□□□□ 0.5
PTPN21-201ENST00000328736 CABP1Q9NZU7 370 aa18.2■□□□□ 0.5
PTPN21-201ENST00000328736 ME1P48163 572 aa18.2■□□□□ 0.5
PTPN21-201ENST00000328736 ZNF76P36508 570 aa18.2■□□□□ 0.5
PTPN21-201ENST00000328736 HMGN5P82970 282 aaKnown RBP18.2■□□□□ 0.5
PTPN21-201ENST00000328736 WASF1Q92558 559 aa18.2■□□□□ 0.5
PTPN21-201ENST00000328736 WDR33Q9C0J8 1336 aaKnown RBP18.2■□□□□ 0.5
PTPN21-201ENST00000328736 ZSCAN29Q8IWY8 852 aaPredicted RBP18.19■□□□□ 0.5
PTPN21-201ENST00000328736 DDX54Q8TDD1 881 aaKnown RBP18.19■□□□□ 0.5
PTPN21-201ENST00000328736 GBP2P32456 591 aaPredicted RBP18.19■□□□□ 0.5
PTPN21-201ENST00000328736 ZNF530Q6P9A1 599 aaPredicted RBP18.19■□□□□ 0.5
PTPN21-201ENST00000328736 UBAC1Q9BSL1 405 aa18.19■□□□□ 0.5
PTPN21-201ENST00000328736 SIL1Q9H173 461 aa18.19■□□□□ 0.5
PTPN21-201ENST00000328736 STK3Q13188 491 aa18.19■□□□□ 0.5
PTPN21-201ENST00000328736 C9orf84Q5VXU9 1444 aa18.19■□□□□ 0.5
PTPN21-201ENST00000328736 ERLIN1O75477 346 aa18.18■□□□□ 0.5
PTPN21-201ENST00000328736 KRT85P78386 507 aa18.18■□□□□ 0.5
PTPN21-201ENST00000328736 NUTM2BA6NNL0 878 aaPredicted RBP18.18■□□□□ 0.5
PTPN21-201ENST00000328736 NUTM2EB1AL46 878 aaPredicted RBP18.18■□□□□ 0.5
PTPN21-201ENST00000328736 SULT6B1Q6IMI4 303 aa18.18■□□□□ 0.5
PTPN21-201ENST00000328736 NUTM2AQ8IVF1 878 aaPredicted RBP18.18■□□□□ 0.5
PTPN21-201ENST00000328736 TDO2P48775 406 aa18.18■□□□□ 0.5
PTPN21-201ENST00000328736 SEPT11Q9NVA2 429 aaKnown RBP18.18■□□□□ 0.5
PTPN21-201ENST00000328736 WDR97A6NE52 1622 aa18.17■□□□□ 0.5
PTPN21-201ENST00000328736 PDE3AQ14432 1141 aa18.17■□□□□ 0.5
PTPN21-201ENST00000328736 RRS1Q15050 365 aaKnown RBP18.17■□□□□ 0.5
PTPN21-201ENST00000328736 TMOD2Q9NZR1 351 aa18.17■□□□□ 0.5
PTPN21-201ENST00000328736 KIAA0754O94854 1291 aa18.17■□□□□ 0.5
PTPN21-201ENST00000328736 POTEJP0CG39 1038 aa18.17■□□□□ 0.5
PTPN21-201ENST00000328736 JAKMIP3Q5VZ66 844 aa18.16■□□□□ 0.5
PTPN21-201ENST00000328736 ZSCAN31Q96LW9 406 aaPredicted RBP18.16■□□□□ 0.5
PTPN21-201ENST00000328736 GRIN2BQ13224 1484 aa18.16■□□□□ 0.5
PTPN21-201ENST00000328736 EIF3JO75822 258 aaKnown RBP18.15■□□□□ 0.5
PTPN21-201ENST00000328736 CEP57L1Q8IYX8 460 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms